RNA–Protein interactions for RNA: ENST00000529307.1

CAPRIN1-207, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAPRIN1, Length 2,266 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-207ENST00000529307 INCA1Q0VD86 236 aa17.61■□□□□ 0.41
CAPRIN1-207ENST00000529307 SMYD5Q6GMV2 418 aa17.61■□□□□ 0.41
CAPRIN1-207ENST00000529307 TMEM176AQ96HP8 235 aa17.61■□□□□ 0.41
CAPRIN1-207ENST00000529307 ATP6V1G3Q96LB4 118 aa17.61■□□□□ 0.41
CAPRIN1-207ENST00000529307 NOP53Q9NZM5 478 aaKnown RBP17.61■□□□□ 0.41
CAPRIN1-207ENST00000529307 TTC7AQ9ULT0 858 aaPredicted RBP17.61■□□□□ 0.41
CAPRIN1-207ENST00000529307 TCRBV5S1A1TA0A578 114 aa17.6■□□□□ 0.41
CAPRIN1-207ENST00000529307 C5orf60A6NFR6 353 aa17.6■□□□□ 0.41
CAPRIN1-207ENST00000529307 A6NHS1 94 aa17.6■□□□□ 0.41
CAPRIN1-207ENST00000529307 MEIS3P2A8K0S8 358 aa17.6■□□□□ 0.41
CAPRIN1-207ENST00000529307 FGGP02679 453 aa17.6■□□□□ 0.41
CAPRIN1-207ENST00000529307 P4HA1P13674 534 aa17.6■□□□□ 0.41
CAPRIN1-207ENST00000529307 NDST1P52848 882 aa17.6■□□□□ 0.41
CAPRIN1-207ENST00000529307 TNNC1P63316 161 aa17.6■□□□□ 0.41
CAPRIN1-207ENST00000529307 LIN9Q5TKA1 542 aa17.6■□□□□ 0.41
CAPRIN1-207ENST00000529307 DAB2IPQ5VWQ8 1189 aa17.6■□□□□ 0.41
CAPRIN1-207ENST00000529307 C9orf57Q5W0N0 161 aa17.6■□□□□ 0.41
CAPRIN1-207ENST00000529307 TWF2Q6IBS0 349 aaKnown RBP17.6■□□□□ 0.41
CAPRIN1-207ENST00000529307 TMEM35BQ8NCS4 154 aa17.6■□□□□ 0.41
CAPRIN1-207ENST00000529307 BEST2Q8NFU1 509 aa17.6■□□□□ 0.41
CAPRIN1-207ENST00000529307 TJP2Q9UDY2 1190 aa17.6■□□□□ 0.41
CAPRIN1-207ENST00000529307 BARX2Q9UMQ3 279 aaPredicted RBP17.6■□□□□ 0.41
CAPRIN1-207ENST00000529307 NME7Q9Y5B8 376 aa17.6■□□□□ 0.41
CAPRIN1-207ENST00000529307 M0QZ92 97 aa17.6■□□□□ 0.41
CAPRIN1-207ENST00000529307 SPOPO43791 374 aa17.6■□□□□ 0.41
CAPRIN1-207ENST00000529307 CTNNA1P35221 906 aaKnown RBP17.6■□□□□ 0.41
CAPRIN1-207ENST00000529307 LAMB3Q13751 1172 aa17.6■□□□□ 0.41
CAPRIN1-207ENST00000529307 KCTD19Q17RG1 926 aaPredicted RBP17.6■□□□□ 0.41
CAPRIN1-207ENST00000529307 KLHL7Q8IXQ5 586 aa17.6■□□□□ 0.41
CAPRIN1-207ENST00000529307 CACNA2D3Q8IZS8 1091 aa17.6■□□□□ 0.41
CAPRIN1-207ENST00000529307 EZH1Q92800 747 aaPredicted RBP17.6■□□□□ 0.41
CAPRIN1-207ENST00000529307 SEC16BQ96JE7 1060 aa17.6■□□□□ 0.41
CAPRIN1-207ENST00000529307 ZNF570Q96NI8 536 aa17.6■□□□□ 0.41
CAPRIN1-207ENST00000529307 MRPL45Q9BRJ2 306 aaKnown RBP17.6■□□□□ 0.41
CAPRIN1-207ENST00000529307 WNT8AQ9H1J5 351 aa17.6■□□□□ 0.41
CAPRIN1-207ENST00000529307 AGO3Q9H9G7 860 aaKnown RBP17.6■□□□□ 0.41
CAPRIN1-207ENST00000529307 GOLGA2P5Q9HBQ8 144 aa17.6■□□□□ 0.41
CAPRIN1-207ENST00000529307 SNX9Q9Y5X1 595 aa17.6■□□□□ 0.41
CAPRIN1-207ENST00000529307 LINGO3P0C6S8 592 aa17.59■□□□□ 0.41
CAPRIN1-207ENST00000529307 KCNE1P15382 129 aa17.59■□□□□ 0.41
CAPRIN1-207ENST00000529307 CYP3A5P20815 502 aa17.59■□□□□ 0.41
CAPRIN1-207ENST00000529307 CTNNA2P26232 953 aa17.59■□□□□ 0.41
CAPRIN1-207ENST00000529307 NFX1Q12986 1120 aaKnown RBP17.59■□□□□ 0.41
CAPRIN1-207ENST00000529307 MTA1Q13330 715 aa17.59■□□□□ 0.41
CAPRIN1-207ENST00000529307 HIBCHQ6NVY1 386 aaPredicted RBP17.59■□□□□ 0.41
CAPRIN1-207ENST00000529307 C8orf74Q6P047 294 aa17.59■□□□□ 0.41
CAPRIN1-207ENST00000529307 RSPH3Q86UC2 560 aa17.59■□□□□ 0.41
CAPRIN1-207ENST00000529307 UBL4BQ8N7F7 174 aa17.59■□□□□ 0.41
CAPRIN1-207ENST00000529307 CCT6BQ92526 530 aa17.59■□□□□ 0.41
CAPRIN1-207ENST00000529307 ZNF518BQ9C0D4 1074 aa17.59■□□□□ 0.41
CAPRIN1-207ENST00000529307 PPANQ9NQ55 473 aaKnown RBP17.59■□□□□ 0.41
CAPRIN1-207ENST00000529307 PAPOLBQ9NRJ5 636 aaKnown RBP17.59■□□□□ 0.41
CAPRIN1-207ENST00000529307 UBQLN1Q9UMX0 589 aaKnown RBP17.59■□□□□ 0.41
CAPRIN1-207ENST00000529307 PCDHA3Q9Y5H8 950 aa17.59■□□□□ 0.41
CAPRIN1-207ENST00000529307 KRIT1O00522 736 aa17.59■□□□□ 0.41
CAPRIN1-207ENST00000529307 PIRO00625 290 aa17.59■□□□□ 0.41
CAPRIN1-207ENST00000529307 SPTLC1O15269 473 aa17.59■□□□□ 0.41
CAPRIN1-207ENST00000529307 LUC7L3O95232 432 aaKnown RBP17.59■□□□□ 0.41
CAPRIN1-207ENST00000529307 GLI1P08151 1106 aa17.59■□□□□ 0.41
CAPRIN1-207ENST00000529307 PYGMP11217 842 aa17.59■□□□□ 0.41
CAPRIN1-207ENST00000529307 HOXD10P28358 340 aa17.59■□□□□ 0.41
CAPRIN1-207ENST00000529307 RPL7AP62424 266 aaKnown RBP17.59■□□□□ 0.41
CAPRIN1-207ENST00000529307 PTPN20Q4JDL3 420 aa17.59■□□□□ 0.41
CAPRIN1-207ENST00000529307 CYP4A22Q5TCH4 519 aa17.59■□□□□ 0.41
CAPRIN1-207ENST00000529307 RAET1EQ8TD07 263 aa17.59■□□□□ 0.41
CAPRIN1-207ENST00000529307 ZFP42Q96MM3 310 aa17.59■□□□□ 0.41
CAPRIN1-207ENST00000529307 LHX5Q9H2C1 402 aa17.59■□□□□ 0.41
CAPRIN1-207ENST00000529307 TRMT13Q9NUP7 481 aaKnown RBP17.59■□□□□ 0.41
CAPRIN1-207ENST00000529307 STIM2Q9P246 746 aa17.59■□□□□ 0.41
CAPRIN1-207ENST00000529307 ZSCAN5CA6NGD5 496 aaPredicted RBP17.58■□□□□ 0.4
CAPRIN1-207ENST00000529307 PTGESO14684 152 aa17.58■□□□□ 0.4
CAPRIN1-207ENST00000529307 TRAPPC3O43617 180 aa17.58■□□□□ 0.4
CAPRIN1-207ENST00000529307 THPOP40225 353 aa17.58■□□□□ 0.4
CAPRIN1-207ENST00000529307 ADAT2Q7Z6V5 191 aaKnown RBP17.58■□□□□ 0.4
CAPRIN1-207ENST00000529307 ZDHHC14Q8IZN3 488 aa17.58■□□□□ 0.4
CAPRIN1-207ENST00000529307 LRRC52Q8N7C0 313 aa17.58■□□□□ 0.4
CAPRIN1-207ENST00000529307 HEXIM2Q96MH2 286 aaKnown RBP17.58■□□□□ 0.4
CAPRIN1-207ENST00000529307 PDCD11Q14690 1871 aaKnown RBP17.58■□□□□ 0.4
CAPRIN1-207ENST00000529307 O00370 1275 aa17.58■□□□□ 0.4
CAPRIN1-207ENST00000529307 TLR3O15455 904 aaKnown RBP17.58■□□□□ 0.4
CAPRIN1-207ENST00000529307 RAD51CO43502 376 aa17.58■□□□□ 0.4
CAPRIN1-207ENST00000529307 MICAL2O94851 1124 aa17.58■□□□□ 0.4
CAPRIN1-207ENST00000529307 PROSCO94903 275 aa17.58■□□□□ 0.4
CAPRIN1-207ENST00000529307 SETSIPP0DME0 302 aa17.58■□□□□ 0.4
CAPRIN1-207ENST00000529307 MAGEA8P43361 318 aa17.58■□□□□ 0.4
CAPRIN1-207ENST00000529307 PPP1R7Q15435 360 aa17.58■□□□□ 0.4
CAPRIN1-207ENST00000529307 PPP1R2P3Q6NXS1 205 aa17.58■□□□□ 0.4
CAPRIN1-207ENST00000529307 MREGQ8N565 214 aa17.58■□□□□ 0.4
CAPRIN1-207ENST00000529307 PCSK9Q8NBP7 692 aaKnown RBP17.58■□□□□ 0.4
CAPRIN1-207ENST00000529307 ZFAND2BQ8WV99 257 aa17.58■□□□□ 0.4
CAPRIN1-207ENST00000529307 DDX47Q9H0S4 455 aaKnown RBP17.58■□□□□ 0.4
CAPRIN1-207ENST00000529307 PARVAQ9NVD7 372 aa17.58■□□□□ 0.4
CAPRIN1-207ENST00000529307 MED7O43513 233 aa17.57■□□□□ 0.4
CAPRIN1-207ENST00000529307 HCRTO43612 131 aa17.57■□□□□ 0.4
CAPRIN1-207ENST00000529307 CALB1P05937 261 aa17.57■□□□□ 0.4
CAPRIN1-207ENST00000529307 PYGLP06737 847 aa17.57■□□□□ 0.4
CAPRIN1-207ENST00000529307 IGFBP6P24592 240 aaPredicted RBP17.57■□□□□ 0.4
CAPRIN1-207ENST00000529307 AFF1P51825 1210 aaKnown RBP17.57■□□□□ 0.4
CAPRIN1-207ENST00000529307 ACLYP53396 1101 aa17.57■□□□□ 0.4
CAPRIN1-207ENST00000529307 ITGA7Q13683 1181 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms