RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 TCF3P15923 654 aa12.87□□□□□ -0.35
COPB1-206ENST00000529210 NOP14P78316 857 aaKnown RBP12.87□□□□□ -0.35
COPB1-206ENST00000529210 NCOA4Q13772 614 aa12.87□□□□□ -0.35
COPB1-206ENST00000529210 CCDC142Q17RM4 750 aa12.87□□□□□ -0.35
COPB1-206ENST00000529210 EDRF1Q3B7T1 1238 aa12.87□□□□□ -0.35
COPB1-206ENST00000529210 C1orf220Q5T0J3 134 aa12.87□□□□□ -0.35
COPB1-206ENST00000529210 INTS8Q75QN2 995 aaKnown RBP12.87□□□□□ -0.35
COPB1-206ENST00000529210 YAF2Q8IY57 180 aa12.87□□□□□ -0.35
COPB1-206ENST00000529210 MRPS31Q92665 395 aaKnown RBP12.87□□□□□ -0.35
COPB1-206ENST00000529210 C8orf48Q96LL4 319 aa12.87□□□□□ -0.35
COPB1-206ENST00000529210 TIGD1Q96MW7 591 aa12.87□□□□□ -0.35
COPB1-206ENST00000529210 GTPBP4Q9BZE4 634 aaKnown RBP12.87□□□□□ -0.35
COPB1-206ENST00000529210 CHRDQ9H2X0 955 aa12.87□□□□□ -0.35
COPB1-206ENST00000529210 SNX25Q9H3E2 840 aa12.87□□□□□ -0.35
COPB1-206ENST00000529210 EHD2Q9NZN4 543 aa12.87□□□□□ -0.35
COPB1-206ENST00000529210 PIAS3Q9Y6X2 628 aa12.87□□□□□ -0.35
COPB1-206ENST00000529210 ZNF638Q14966 1978 aaKnown RBP12.87□□□□□ -0.35
COPB1-206ENST00000529210 PRR23AA6NEV1 266 aa12.86□□□□□ -0.35
COPB1-206ENST00000529210 TULP1O00294 542 aaPredicted RBP12.86□□□□□ -0.35
COPB1-206ENST00000529210 PHACTR2O75167 634 aa12.86□□□□□ -0.35
COPB1-206ENST00000529210 ASS1P00966 412 aaKnown RBP12.86□□□□□ -0.35
COPB1-206ENST00000529210 PDGFRBP09619 1106 aa12.86□□□□□ -0.35
COPB1-206ENST00000529210 PTPN1P18031 435 aaKnown RBP12.86□□□□□ -0.35
COPB1-206ENST00000529210 CD72P21854 359 aa12.86□□□□□ -0.35
COPB1-206ENST00000529210 BDNFP23560 247 aa12.86□□□□□ -0.35
COPB1-206ENST00000529210 NR2F2P24468 414 aa12.86□□□□□ -0.35
COPB1-206ENST00000529210 RPL13P26373 211 aaKnown RBP12.86□□□□□ -0.35
COPB1-206ENST00000529210 AVPR1AP37288 418 aa12.86□□□□□ -0.35
COPB1-206ENST00000529210 PPP3CCP48454 512 aa12.86□□□□□ -0.35
COPB1-206ENST00000529210 PSMC1P62191 440 aaKnown RBP12.86□□□□□ -0.35
COPB1-206ENST00000529210 DLG4P78352 724 aa12.86□□□□□ -0.35
COPB1-206ENST00000529210 SGSM1Q2NKQ1 1148 aa12.86□□□□□ -0.35
COPB1-206ENST00000529210 ZNF699Q32M78 642 aa12.86□□□□□ -0.35
COPB1-206ENST00000529210 ZNF667Q5HYK9 610 aa12.86□□□□□ -0.35
COPB1-206ENST00000529210 SV2AQ7L0J3 742 aa12.86□□□□□ -0.35
COPB1-206ENST00000529210 RALGPS2Q86X27 583 aaPredicted RBP12.86□□□□□ -0.35
COPB1-206ENST00000529210 KIAA1958Q8N8K9 716 aa12.86□□□□□ -0.35
COPB1-206ENST00000529210 B3GALNT2Q8NCR0 500 aa12.86□□□□□ -0.35
COPB1-206ENST00000529210 OR6B3Q8NGW1 331 aa12.86□□□□□ -0.35
COPB1-206ENST00000529210 CSGALNACT1Q8TDX6 532 aa12.86□□□□□ -0.35
COPB1-206ENST00000529210 FAM3CQ92520 227 aa12.86□□□□□ -0.35
COPB1-206ENST00000529210 NELL1Q92832 810 aa12.86□□□□□ -0.35
COPB1-206ENST00000529210 USP13Q92995 863 aaPredicted RBP12.86□□□□□ -0.35
COPB1-206ENST00000529210 FAXDC2Q96IV6 333 aa12.86□□□□□ -0.35
COPB1-206ENST00000529210 GSDMAQ96QA5 445 aa12.86□□□□□ -0.35
COPB1-206ENST00000529210 FAM83CQ9BQN1 747 aa12.86□□□□□ -0.35
COPB1-206ENST00000529210 ELOVL4Q9GZR5 314 aa12.86□□□□□ -0.35
COPB1-206ENST00000529210 PRMT8Q9NR22 394 aaPredicted RBP12.86□□□□□ -0.35
COPB1-206ENST00000529210 TDP1Q9NUW8 608 aa12.86□□□□□ -0.35
COPB1-206ENST00000529210 RMND1Q9NWS8 449 aa12.86□□□□□ -0.35
COPB1-206ENST00000529210 THG1LQ9NWX6 298 aaKnown RBP12.86□□□□□ -0.35
COPB1-206ENST00000529210 RIF1Q5UIP0 2472 aaKnown RBP12.85□□□□□ -0.35
COPB1-206ENST00000529210 A8MXQ7 604 aa12.85□□□□□ -0.35
COPB1-206ENST00000529210 GFRA3O60609 400 aa12.85□□□□□ -0.35
COPB1-206ENST00000529210 AKAP3O75969 853 aa12.85□□□□□ -0.35
COPB1-206ENST00000529210 SP9P0CG40 484 aa12.85□□□□□ -0.35
COPB1-206ENST00000529210 CHRNB1P11230 501 aa12.85□□□□□ -0.35
COPB1-206ENST00000529210 P4HA1P13674 534 aa12.85□□□□□ -0.35
COPB1-206ENST00000529210 VAMP7P51809 220 aa12.85□□□□□ -0.35
COPB1-206ENST00000529210 CDR1P51861 262 aa12.85□□□□□ -0.35
COPB1-206ENST00000529210 FAM160A1Q05DH4 1040 aa12.85□□□□□ -0.35
COPB1-206ENST00000529210 BIRC3Q13489 604 aa12.85□□□□□ -0.35
COPB1-206ENST00000529210 SDHAF4Q5VUM1 108 aa12.85□□□□□ -0.35
COPB1-206ENST00000529210 TXNDC8Q6A555 127 aa12.85□□□□□ -0.35
COPB1-206ENST00000529210 ZC3H14Q6PJT7 736 aaKnown RBP12.85□□□□□ -0.35
COPB1-206ENST00000529210 DENND5BQ6ZUT9 1274 aa12.85□□□□□ -0.35
COPB1-206ENST00000529210 FRMD5Q7Z6J6 570 aa12.85□□□□□ -0.35
COPB1-206ENST00000529210 UNC93AQ86WB7 457 aa12.85□□□□□ -0.35
COPB1-206ENST00000529210 SCN4BQ8IWT1 228 aa12.85□□□□□ -0.35
COPB1-206ENST00000529210 ZC3H3Q8IXZ2 948 aaKnown RBP12.85□□□□□ -0.35
COPB1-206ENST00000529210 MAB21L3Q8N8X9 362 aa12.85□□□□□ -0.35
COPB1-206ENST00000529210 NKD2Q969F2 451 aaPredicted RBP12.85□□□□□ -0.35
COPB1-206ENST00000529210 TNIP3Q96KP6 325 aa12.85□□□□□ -0.35
COPB1-206ENST00000529210 GCNT4Q9P109 453 aa12.85□□□□□ -0.35
COPB1-206ENST00000529210 NXF1Q9UBU9 619 aaKnown RBP12.85□□□□□ -0.35
COPB1-206ENST00000529210 MAGED2Q9UNF1 606 aaPredicted RBP12.85□□□□□ -0.35
COPB1-206ENST00000529210 HELZP42694 1942 aaKnown RBP12.85□□□□□ -0.35
COPB1-206ENST00000529210 FAM186AA6NE01 2351 aa12.85□□□□□ -0.35
COPB1-206ENST00000529210 LAMTOR5O43504 91 aa12.84□□□□□ -0.35
COPB1-206ENST00000529210 OLFM2O95897 454 aa12.84□□□□□ -0.35
COPB1-206ENST00000529210 GTF2H1P32780 548 aa12.84□□□□□ -0.35
COPB1-206ENST00000529210 CTHP32929 405 aa12.84□□□□□ -0.35
COPB1-206ENST00000529210 PSMC2P35998 433 aaKnown RBP12.84□□□□□ -0.35
COPB1-206ENST00000529210 GRIK1P39086 918 aa12.84□□□□□ -0.35
COPB1-206ENST00000529210 PDE6CP51160 858 aa12.84□□□□□ -0.35
COPB1-206ENST00000529210 CYP27A1Q02318 531 aa12.84□□□□□ -0.35
COPB1-206ENST00000529210 USP4Q13107 963 aa12.84□□□□□ -0.35
COPB1-206ENST00000529210 ADAM9Q13443 819 aa12.84□□□□□ -0.35
COPB1-206ENST00000529210 ZNF77Q15935 545 aa12.84□□□□□ -0.35
COPB1-206ENST00000529210 MDH1BQ5I0G3 518 aa12.84□□□□□ -0.35
COPB1-206ENST00000529210 ZNF658Q5TYW1 1059 aaPredicted RBP12.84□□□□□ -0.35
COPB1-206ENST00000529210 CEP135Q66GS9 1140 aa12.84□□□□□ -0.35
COPB1-206ENST00000529210 ASCL5Q7RTU5 278 aa12.84□□□□□ -0.35
COPB1-206ENST00000529210 FAM186BQ8IYM0 893 aa12.84□□□□□ -0.35
COPB1-206ENST00000529210 CRYBG2Q8N1P7 616 aa12.84□□□□□ -0.35
COPB1-206ENST00000529210 STKLD1Q8NE28 680 aa12.84□□□□□ -0.35
COPB1-206ENST00000529210 OVCA2Q8WZ82 227 aa12.84□□□□□ -0.35
COPB1-206ENST00000529210 FAM126AQ9BYI3 521 aaPredicted RBP12.84□□□□□ -0.35
COPB1-206ENST00000529210 DPEP3Q9H4B8 488 aa12.84□□□□□ -0.35
COPB1-206ENST00000529210 FAM124BQ9H5Z6 455 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms