RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 C2orf42Q9NWW7 574 aa16.73■□□□□ 0.27
CTSB-215ENST00000528965 HSPBP1Q9NZL4 362 aa16.73■□□□□ 0.27
CTSB-215ENST00000528965 UBE4BO95155 1302 aa16.72■□□□□ 0.27
CTSB-215ENST00000528965 DCDC2BA2VCK2 349 aa16.72■□□□□ 0.27
CTSB-215ENST00000528965 TRIM66O15016 1216 aa16.72■□□□□ 0.27
CTSB-215ENST00000528965 SPTLC2O15270 562 aa16.72■□□□□ 0.27
CTSB-215ENST00000528965 RNF40O75150 1001 aa16.72■□□□□ 0.27
CTSB-215ENST00000528965 ZNF77Q15935 545 aa16.72■□□□□ 0.27
CTSB-215ENST00000528965 FAM171BQ6P995 826 aa16.72■□□□□ 0.27
CTSB-215ENST00000528965 CBWD2Q8IUF1 395 aa16.72■□□□□ 0.27
CTSB-215ENST00000528965 MYLPFQ96A32 169 aa16.72■□□□□ 0.27
CTSB-215ENST00000528965 FAM84AQ96KN4 292 aa16.72■□□□□ 0.27
CTSB-215ENST00000528965 SPATA17Q96L03 361 aa16.72■□□□□ 0.27
CTSB-215ENST00000528965 FNBP1Q96RU3 617 aa16.72■□□□□ 0.27
CTSB-215ENST00000528965 MMS19Q96T76 1030 aa16.72■□□□□ 0.27
CTSB-215ENST00000528965 ECT2Q9H8V3 914 aa16.72■□□□□ 0.27
CTSB-215ENST00000528965 MAGEF1Q9HAY2 307 aa16.72■□□□□ 0.27
CTSB-215ENST00000528965 DENND4CQ5VZ89 1909 aa16.72■□□□□ 0.27
CTSB-215ENST00000528965 OBSL1O75147 1896 aa16.71■□□□□ 0.27
CTSB-215ENST00000528965 OTOL1A6NHN0 477 aaPredicted RBP16.71■□□□□ 0.27
CTSB-215ENST00000528965 PPP6R2O75170 966 aa16.71■□□□□ 0.27
CTSB-215ENST00000528965 EGFP01133 1207 aa16.71■□□□□ 0.27
CTSB-215ENST00000528965 TCF3P15923 654 aa16.71■□□□□ 0.27
CTSB-215ENST00000528965 WARSP23381 471 aaKnown RBP16.71■□□□□ 0.27
CTSB-215ENST00000528965 GJA4P35212 333 aa16.71■□□□□ 0.27
CTSB-215ENST00000528965 GRIK1P39086 918 aa16.71■□□□□ 0.27
CTSB-215ENST00000528965 PSMC1P62191 440 aaKnown RBP16.71■□□□□ 0.27
CTSB-215ENST00000528965 SNRPFP62306 86 aaKnown RBP16.71■□□□□ 0.27
CTSB-215ENST00000528965 AASDHQ4L235 1098 aaPredicted RBP16.71■□□□□ 0.27
CTSB-215ENST00000528965 FAM26FQ5R3K3 315 aa16.71■□□□□ 0.27
CTSB-215ENST00000528965 PKN3Q6P5Z2 889 aa16.71■□□□□ 0.27
CTSB-215ENST00000528965 HS2ST1Q7LGA3 356 aa16.71■□□□□ 0.27
CTSB-215ENST00000528965 IQUBQ8NA54 791 aa16.71■□□□□ 0.27
CTSB-215ENST00000528965 C12orf50Q8NA57 414 aaPredicted RBP16.71■□□□□ 0.27
CTSB-215ENST00000528965 LINC00301Q8NCQ3 95 aa16.71■□□□□ 0.27
CTSB-215ENST00000528965 OR5B17Q8NGF7 314 aa16.71■□□□□ 0.27
CTSB-215ENST00000528965 KBTBD7Q8WVZ9 684 aa16.71■□□□□ 0.27
CTSB-215ENST00000528965 CD101Q93033 1021 aa16.71■□□□□ 0.27
CTSB-215ENST00000528965 TRIM9Q9C026 710 aa16.71■□□□□ 0.27
CTSB-215ENST00000528965 KBTBD4Q9NVX7 518 aa16.71■□□□□ 0.27
CTSB-215ENST00000528965 TRPM5Q9NZQ8 1165 aa16.71■□□□□ 0.27
CTSB-215ENST00000528965 ARHGAP26Q9UNA1 814 aa16.71■□□□□ 0.27
CTSB-215ENST00000528965 WNT6Q9Y6F9 365 aa16.71■□□□□ 0.27
CTSB-215ENST00000528965 ZNF638Q14966 1978 aaKnown RBP16.71■□□□□ 0.27
CTSB-215ENST00000528965 SPTBN2O15020 2390 aa16.71■□□□□ 0.26
CTSB-215ENST00000528965 K7ELQ4 463 aaPredicted RBP16.7■□□□□ 0.26
CTSB-215ENST00000528965 EPN2O95208 641 aa16.7■□□□□ 0.26
CTSB-215ENST00000528965 NFATC1O95644 943 aa16.7■□□□□ 0.26
CTSB-215ENST00000528965 DLATP10515 647 aaKnown RBP16.7■□□□□ 0.26
CTSB-215ENST00000528965 HDCP19113 662 aa16.7■□□□□ 0.26
CTSB-215ENST00000528965 TNNI1P19237 187 aa16.7■□□□□ 0.26
CTSB-215ENST00000528965 PPP3CCP48454 512 aa16.7■□□□□ 0.26
CTSB-215ENST00000528965 TNNC1P63316 161 aa16.7■□□□□ 0.26
CTSB-215ENST00000528965 CYP27A1Q02318 531 aa16.7■□□□□ 0.26
CTSB-215ENST00000528965 SNRNP35Q16560 246 aaKnown RBP16.7■□□□□ 0.26
CTSB-215ENST00000528965 CCDC142Q17RM4 750 aa16.7■□□□□ 0.26
CTSB-215ENST00000528965 IL31Q6EBC2 164 aa16.7■□□□□ 0.26
CTSB-215ENST00000528965 DENND5BQ6ZUT9 1274 aa16.7■□□□□ 0.26
CTSB-215ENST00000528965 LIMS2Q7Z4I7 341 aa16.7■□□□□ 0.26
CTSB-215ENST00000528965 ARL14EPQ8N8R7 260 aaPredicted RBP16.7■□□□□ 0.26
CTSB-215ENST00000528965 RIN3Q8TB24 985 aa16.7■□□□□ 0.26
CTSB-215ENST00000528965 SH3RF2Q8TEC5 729 aa16.7■□□□□ 0.26
CTSB-215ENST00000528965 DHX58Q96C10 678 aa16.7■□□□□ 0.26
CTSB-215ENST00000528965 SNX25Q9H3E2 840 aa16.7■□□□□ 0.26
CTSB-215ENST00000528965 PCDHGA5Q9Y5G8 931 aa16.7■□□□□ 0.26
CTSB-215ENST00000528965 PTPRJQ12913 1337 aa16.7■□□□□ 0.26
CTSB-215ENST00000528965 C2orf78A6NCI8 922 aa16.69■□□□□ 0.26
CTSB-215ENST00000528965 AXIN1O15169 862 aa16.69■□□□□ 0.26
CTSB-215ENST00000528965 HCRTO43612 131 aa16.69■□□□□ 0.26
CTSB-215ENST00000528965 YEATS4O95619 227 aa16.69■□□□□ 0.26
CTSB-215ENST00000528965 APBB3O95704 486 aa16.69■□□□□ 0.26
CTSB-215ENST00000528965 FAM163BP0C2L3 166 aa16.69■□□□□ 0.26
CTSB-215ENST00000528965 BDNFP23560 247 aa16.69■□□□□ 0.26
CTSB-215ENST00000528965 PXNP49023 591 aaPredicted RBP16.69■□□□□ 0.26
CTSB-215ENST00000528965 GALK1P51570 392 aa16.69■□□□□ 0.26
CTSB-215ENST00000528965 PSMD2Q13200 908 aa16.69■□□□□ 0.26
CTSB-215ENST00000528965 ELF2Q15723 593 aa16.69■□□□□ 0.26
CTSB-215ENST00000528965 E2F4Q16254 413 aa16.69■□□□□ 0.26
CTSB-215ENST00000528965 EML3Q32P44 896 aa16.69■□□□□ 0.26
CTSB-215ENST00000528965 PPM1JQ5JR12 505 aa16.69■□□□□ 0.26
CTSB-215ENST00000528965 CNNM4Q6P4Q7 775 aa16.69■□□□□ 0.26
CTSB-215ENST00000528965 SYT13Q7L8C5 426 aa16.69■□□□□ 0.26
CTSB-215ENST00000528965 TRAPPC11Q7Z392 1133 aa16.69■□□□□ 0.26
CTSB-215ENST00000528965 KIAA1958Q8N8K9 716 aa16.69■□□□□ 0.26
CTSB-215ENST00000528965 RPLP0P6Q8NHW5 317 aa16.69■□□□□ 0.26
CTSB-215ENST00000528965 MYCBPAPQ8TBZ2 947 aa16.69■□□□□ 0.26
CTSB-215ENST00000528965 CHFRQ96EP1 664 aa16.69■□□□□ 0.26
CTSB-215ENST00000528965 CGRRF1Q99675 332 aa16.69■□□□□ 0.26
CTSB-215ENST00000528965 CRTAC1Q9NQ79 661 aa16.69■□□□□ 0.26
CTSB-215ENST00000528965 AGPAT3Q9NRZ7 376 aa16.69■□□□□ 0.26
CTSB-215ENST00000528965 FOXD4L1Q9NU39 408 aa16.69■□□□□ 0.26
CTSB-215ENST00000528965 GCNT4Q9P109 453 aa16.69■□□□□ 0.26
CTSB-215ENST00000528965 CUTAO60888 179 aa16.68■□□□□ 0.26
CTSB-215ENST00000528965 ATP2C2O75185 946 aa16.68■□□□□ 0.26
CTSB-215ENST00000528965 TACC1O75410 805 aa16.68■□□□□ 0.26
CTSB-215ENST00000528965 HSP90AA1P07900 732 aaKnown RBP16.68■□□□□ 0.26
CTSB-215ENST00000528965 ADRB1P08588 477 aa16.68■□□□□ 0.26
CTSB-215ENST00000528965 PDGFRBP09619 1106 aa16.68■□□□□ 0.26
CTSB-215ENST00000528965 LMO2P25791 158 aa16.68■□□□□ 0.26
CTSB-215ENST00000528965 RAP1GAPP47736 663 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms