RNA–Protein interactions for RNA: ENST00000528614.1

AP002008.3-201, humanhuman

TSL 1 (best) BASIC

Gene AP002008.3, Length 2,587 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002008.3-201ENST00000528614 TTC13Q8NBP0 860 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 KCTD6Q8NC69 237 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 FNIP1Q8TF40 1166 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 RSAD2Q8WXG1 361 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 TWNKQ96RR1 684 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 NOD2Q9HC29 1040 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 LACTBL1A8MY62 500 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 GPR25O00155 361 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 CNMDO75829 334 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 NFICP08651 508 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 IQCF3P0C7M6 154 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 SSTR1P30872 391 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 GSCP56915 257 aaPredicted RBP11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 DNAJC3Q13217 504 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 SPARCL1Q14515 664 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 ZNF268Q14587 947 aaPredicted RBP11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 TAZQ16635 292 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 PREPLQ4J6C6 727 aaPredicted RBP11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 CCDC91Q7Z6B0 441 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 UNC45BQ8IWX7 931 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 NAT8LQ8N9F0 302 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 C1orf127Q8N9H9 656 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 SLC4A11Q8NBS3 891 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 PYROXD1Q8WU10 500 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 THOC1Q96FV9 657 aaKnown RBP11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 FGD4Q96M96 766 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 MAK16Q9BXY0 300 aaKnown RBP11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 ELOVL4Q9GZR5 314 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 SMYD3Q9H7B4 428 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 WDR35Q9P2L0 1181 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 SLC24A2Q9UI40 661 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 RABGEF1Q9UJ41 708 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 GRID1Q9ULK0 1009 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 PHTF1Q9UMS5 762 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 SMG5Q9UPR3 1016 aaKnown RBP11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 TNFSF13BQ9Y275 285 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 CLUHO75153 1309 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 IGF2BP3O00425 579 aaKnown RBP eCLIP11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 MICAL2O94851 1124 aa11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 IL18RAPO95256 599 aa11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 CA4P22748 312 aa11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 MIPP30301 263 aa11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 SLC18A1P54219 525 aa11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 ARL4CP56559 192 aa11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 MBTD1Q05BQ5 628 aa11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 ACVR2BQ13705 512 aa11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 SLC1A5Q15758 541 aa11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 WLSQ5T9L3 541 aa11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 RFX6Q8HWS3 928 aa11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 SPOCK2Q92563 424 aa11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 HSPH1Q92598 858 aa11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 KLHL29Q96CT2 875 aa11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 FRMD8P1Q9BZ68 369 aaPredicted RBP11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 SENP1Q9P0U3 644 aa11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 PSMC3IPQ9P2W1 217 aaPredicted RBP11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 HMGXB4Q9UGU5 601 aa11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 CSADQ9Y600 493 aa11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 BRCA1P38398 1863 aaKnown RBP11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 WDR90Q96KV7 1748 aa11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 TCRBV7S3A2A0A539 114 aa11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 CSDE1O75534 798 aaKnown RBP11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 PIAS1O75925 651 aa11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 ITGB3P05106 788 aa11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 GEMIN4P57678 1058 aaKnown RBP11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 PTPN11Q06124 597 aaPredicted RBP11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 EFTUD2Q15029 972 aaKnown RBP eCLIP11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 RASA2Q15283 850 aa11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 E2F5Q15329 346 aa11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 Q3C1V9 767 aa11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 EFHC2Q5JST6 749 aa11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 JADE1Q6IE81 842 aa11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 C3orf62Q6ZUJ4 267 aa11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 FBXO16Q8IX29 292 aaPredicted RBP11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 KIF2BQ8N4N8 673 aa11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 ANKLE1Q8NAG6 615 aa11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 CMASQ8NFW8 434 aaPredicted RBP11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 MPHOSPH6Q99547 160 aaKnown RBP11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 ASCC2Q9H1I8 757 aaPredicted RBP11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 SMARCAD1Q9H4L7 1026 aa11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 SLCO1B3Q9NPD5 702 aa11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 ZMYND8Q9ULU4 1186 aaPredicted RBP11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 STARD13Q9Y3M8 1113 aa11.02□□□□□ -0.65
AP002008.3-201ENST00000528614 TYROBPO43914 113 aa11.01□□□□□ -0.65
AP002008.3-201ENST00000528614 HBP1O60381 514 aa11.01□□□□□ -0.65
AP002008.3-201ENST00000528614 TRUB2O95900 331 aaKnown RBP11.01□□□□□ -0.65
AP002008.3-201ENST00000528614 STAG3L1P0CL83 205 aa11.01□□□□□ -0.65
AP002008.3-201ENST00000528614 IBSPP21815 317 aaPredicted RBP11.01□□□□□ -0.65
AP002008.3-201ENST00000528614 SLC8A1P32418 973 aa11.01□□□□□ -0.65
AP002008.3-201ENST00000528614 PHBP35232 272 aa11.01□□□□□ -0.65
AP002008.3-201ENST00000528614 EIF3EP60228 445 aaKnown RBP11.01□□□□□ -0.65
AP002008.3-201ENST00000528614 MTM1Q13496 603 aa11.01□□□□□ -0.65
AP002008.3-201ENST00000528614 RIPK1Q13546 671 aa11.01□□□□□ -0.65
AP002008.3-201ENST00000528614 CCDC62Q6P9F0 684 aa11.01□□□□□ -0.65
AP002008.3-201ENST00000528614 FAM71DQ8N9W8 422 aa11.01□□□□□ -0.65
AP002008.3-201ENST00000528614 FBXO36Q8NEA4 188 aa11.01□□□□□ -0.65
AP002008.3-201ENST00000528614 UBA3Q8TBC4 463 aa11.01□□□□□ -0.65
AP002008.3-201ENST00000528614 MCRS1Q96EZ8 462 aa11.01□□□□□ -0.65
AP002008.3-201ENST00000528614 TMEM176AQ96HP8 235 aa11.01□□□□□ -0.65
AP002008.3-201ENST00000528614 ELP3Q9H9T3 547 aa11.01□□□□□ -0.65
AP002008.3-201ENST00000528614 PPCSQ9HAB8 311 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms