RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 ADRA1DP25100 572 aa18.69■□□□□ 0.58
LTBP3-210ENST00000528516 R3HDM1Q15032 1099 aaKnown RBP18.69■□□□□ 0.58
LTBP3-210ENST00000528516 CMPK2Q5EBM0 449 aa18.69■□□□□ 0.58
LTBP3-210ENST00000528516 ARSHQ5FYA8 562 aa18.69■□□□□ 0.58
LTBP3-210ENST00000528516 PSPC1Q8WXF1 523 aaKnown RBP18.69■□□□□ 0.58
LTBP3-210ENST00000528516 AAASQ9NRG9 546 aa18.69■□□□□ 0.58
LTBP3-210ENST00000528516 FBXO40Q9UH90 709 aa18.69■□□□□ 0.58
LTBP3-210ENST00000528516 CNTRLQ7Z7A1 2325 aa18.69■□□□□ 0.58
LTBP3-210ENST00000528516 ASMTLO95671 621 aa18.69■□□□□ 0.58
LTBP3-210ENST00000528516 VAV1P15498 845 aa18.69■□□□□ 0.58
LTBP3-210ENST00000528516 CYP11B1P15538 503 aa18.69■□□□□ 0.58
LTBP3-210ENST00000528516 CHRNB2P17787 502 aa18.69■□□□□ 0.58
LTBP3-210ENST00000528516 CAV1Q03135 178 aa18.69■□□□□ 0.58
LTBP3-210ENST00000528516 BTKQ06187 659 aa18.69■□□□□ 0.58
LTBP3-210ENST00000528516 AMHR2Q16671 573 aa18.69■□□□□ 0.58
LTBP3-210ENST00000528516 PPP4R1Q8TF05 950 aa18.69■□□□□ 0.58
LTBP3-210ENST00000528516 TSSK1BQ9BXA7 367 aa18.69■□□□□ 0.58
LTBP3-210ENST00000528516 NUB1Q9Y5A7 615 aa18.69■□□□□ 0.58
LTBP3-210ENST00000528516 SLC16A3O15427 465 aaKnown RBP18.68■□□□□ 0.58
LTBP3-210ENST00000528516 CST8O60676 142 aa18.68■□□□□ 0.58
LTBP3-210ENST00000528516 JAM2P57087 298 aa18.68■□□□□ 0.58
LTBP3-210ENST00000528516 SESN2P58004 480 aaPredicted RBP18.68■□□□□ 0.58
LTBP3-210ENST00000528516 GSTA3Q16772 222 aa18.68■□□□□ 0.58
LTBP3-210ENST00000528516 TKFCQ3LXA3 575 aa18.68■□□□□ 0.58
LTBP3-210ENST00000528516 Q4G0T1 1027 aa18.68■□□□□ 0.58
LTBP3-210ENST00000528516 MICALL2Q8IY33 904 aa18.68■□□□□ 0.58
LTBP3-210ENST00000528516 PRPF31Q8WWY3 499 aaKnown RBP18.68■□□□□ 0.58
LTBP3-210ENST00000528516 CHD4Q14839 1912 aa18.68■□□□□ 0.58
LTBP3-210ENST00000528516 ZSCAN9O15535 394 aaPredicted RBP18.68■□□□□ 0.58
LTBP3-210ENST00000528516 KRT3P12035 628 aa18.68■□□□□ 0.58
LTBP3-210ENST00000528516 MMEL1Q495T6 779 aa18.68■□□□□ 0.58
LTBP3-210ENST00000528516 OTOP1Q7RTM1 612 aa18.68■□□□□ 0.58
LTBP3-210ENST00000528516 DEFB132Q7Z7B7 95 aa18.68■□□□□ 0.58
LTBP3-210ENST00000528516 LRRN4Q8WUT4 740 aa18.68■□□□□ 0.58
LTBP3-210ENST00000528516 DCPSQ96C86 337 aaKnown RBP18.68■□□□□ 0.58
LTBP3-210ENST00000528516 MTBPQ96DY7 904 aa18.68■□□□□ 0.58
LTBP3-210ENST00000528516 CDHR1Q96JP9 859 aa18.68■□□□□ 0.58
LTBP3-210ENST00000528516 NR1H4Q96RI1 486 aaPredicted RBP18.68■□□□□ 0.58
LTBP3-210ENST00000528516 VPS11Q9H270 941 aa18.68■□□□□ 0.58
LTBP3-210ENST00000528516 TAF1P21675 1872 aa18.68■□□□□ 0.58
LTBP3-210ENST00000528516 PDGFRBP09619 1106 aa18.68■□□□□ 0.58
LTBP3-210ENST00000528516 ADORA2BP29275 332 aa18.68■□□□□ 0.58
LTBP3-210ENST00000528516 SLC12A3P55017 1021 aa18.68■□□□□ 0.58
LTBP3-210ENST00000528516 YWHAEP62258 255 aaKnown RBP18.68■□□□□ 0.58
LTBP3-210ENST00000528516 DALRD3Q5D0E6 543 aaKnown RBP18.68■□□□□ 0.58
LTBP3-210ENST00000528516 SLC26A7Q8TE54 656 aa18.68■□□□□ 0.58
LTBP3-210ENST00000528516 ECSITQ9BQ95 431 aa18.68■□□□□ 0.58
LTBP3-210ENST00000528516 DHX35Q9H5Z1 703 aaKnown RBP18.68■□□□□ 0.58
LTBP3-210ENST00000528516 RPL26L1Q9UNX3 145 aaKnown RBP18.68■□□□□ 0.58
LTBP3-210ENST00000528516 ONECUT3O60422 494 aaPredicted RBP18.68■□□□□ 0.58
LTBP3-210ENST00000528516 CDK7P50613 346 aa18.68■□□□□ 0.58
LTBP3-210ENST00000528516 STAT5BP51692 787 aa18.68■□□□□ 0.58
LTBP3-210ENST00000528516 TNFAIP8L3Q5GJ75 292 aa18.68■□□□□ 0.58
LTBP3-210ENST00000528516 C11orf63Q6NUN7 778 aa18.68■□□□□ 0.58
LTBP3-210ENST00000528516 RINLQ6ZS11 566 aa18.68■□□□□ 0.58
LTBP3-210ENST00000528516 KBTBD2Q8IY47 623 aa18.68■□□□□ 0.58
LTBP3-210ENST00000528516 TMEM120AQ9BXJ8 343 aa18.68■□□□□ 0.58
LTBP3-210ENST00000528516 KIAA1586Q9HCI6 787 aa18.68■□□□□ 0.58
LTBP3-210ENST00000528516 PHF24Q9UPV7 400 aa18.68■□□□□ 0.58
LTBP3-210ENST00000528516 SCINQ9Y6U3 715 aa18.68■□□□□ 0.58
LTBP3-210ENST00000528516 C2CD2LO14523 706 aa18.67■□□□□ 0.58
LTBP3-210ENST00000528516 COPEO14579 308 aa18.67■□□□□ 0.58
LTBP3-210ENST00000528516 ZSCAN5DPP0CG00 497 aa18.67■□□□□ 0.58
LTBP3-210ENST00000528516 IL1R1P14778 569 aa18.67■□□□□ 0.58
LTBP3-210ENST00000528516 ATP6V1B1P15313 513 aa18.67■□□□□ 0.58
LTBP3-210ENST00000528516 ABCD1P33897 745 aa18.67■□□□□ 0.58
LTBP3-210ENST00000528516 SLC12A2P55011 1212 aa18.67■□□□□ 0.58
LTBP3-210ENST00000528516 ARL4CP56559 192 aa18.67■□□□□ 0.58
LTBP3-210ENST00000528516 ATP13A4Q4VNC1 1196 aa18.67■□□□□ 0.58
LTBP3-210ENST00000528516 GPAT2Q6NUI2 795 aa18.67■□□□□ 0.58
LTBP3-210ENST00000528516 TRABD2AQ86V40 505 aa18.67■□□□□ 0.58
LTBP3-210ENST00000528516 LRRC6Q86X45 466 aa18.67■□□□□ 0.58
LTBP3-210ENST00000528516 RBM12BQ8IXT5 1001 aaKnown RBP18.67■□□□□ 0.58
LTBP3-210ENST00000528516 PIP4K2CQ8TBX8 421 aa18.67■□□□□ 0.58
LTBP3-210ENST00000528516 CLPTM1LQ96KA5 538 aa18.67■□□□□ 0.58
LTBP3-210ENST00000528516 TMEM121Q9BTD3 319 aa18.67■□□□□ 0.58
LTBP3-210ENST00000528516 PIH1D1Q9NWS0 290 aaKnown RBP18.67■□□□□ 0.58
LTBP3-210ENST00000528516 TBX20Q9UMR3 447 aa18.67■□□□□ 0.58
LTBP3-210ENST00000528516 A0A1W2PPM1 405 aa18.67■□□□□ 0.58
LTBP3-210ENST00000528516 ANPEPP15144 967 aa18.67■□□□□ 0.58
LTBP3-210ENST00000528516 MOGSQ13724 837 aa18.67■□□□□ 0.58
LTBP3-210ENST00000528516 GATA6Q92908 595 aa18.67■□□□□ 0.58
LTBP3-210ENST00000528516 LENG1Q96BZ8 264 aaPredicted RBP18.67■□□□□ 0.58
LTBP3-210ENST00000528516 DEFB129Q9H1M3 183 aa18.67■□□□□ 0.58
LTBP3-210ENST00000528516 RAB6BQ9NRW1 208 aa18.67■□□□□ 0.58
LTBP3-210ENST00000528516 FAF1Q9UNN5 650 aaPredicted RBP18.67■□□□□ 0.58
LTBP3-210ENST00000528516 MYH3P11055 1940 aa18.67■□□□□ 0.58
LTBP3-210ENST00000528516 BAZ2AQ9UIF9 1905 aaKnown RBP18.67■□□□□ 0.58
LTBP3-210ENST00000528516 IL31RAQ8NI17 732 aa18.67■□□□□ 0.58
LTBP3-210ENST00000528516 NAT14Q8WUY8 206 aa18.67■□□□□ 0.58
LTBP3-210ENST00000528516 LNPEPQ9UIQ6 1025 aa18.67■□□□□ 0.58
LTBP3-210ENST00000528516 CASZ1Q86V15 1759 aa18.66■□□□□ 0.58
LTBP3-210ENST00000528516 SMARCA1P28370 1054 aa18.66■□□□□ 0.58
LTBP3-210ENST00000528516 HIF1AQ16665 826 aa18.66■□□□□ 0.58
LTBP3-210ENST00000528516 PCNX4Q63HM2 1172 aa18.66■□□□□ 0.58
LTBP3-210ENST00000528516 C3orf62Q6ZUJ4 267 aa18.66■□□□□ 0.58
LTBP3-210ENST00000528516 RTKN2Q8IZC4 609 aa18.66■□□□□ 0.58
LTBP3-210ENST00000528516 PPP2R3CQ969Q6 453 aa18.66■□□□□ 0.58
LTBP3-210ENST00000528516 ZDHHC15Q96MV8 337 aa18.66■□□□□ 0.58
LTBP3-210ENST00000528516 PEX10O60683 326 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms