RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 DLG4P78352 724 aa9.68□□□□□ -0.86
CMTM1-210ENST00000528441 ANGPT1Q15389 498 aa9.68□□□□□ -0.86
CMTM1-210ENST00000528441 CCDC142Q17RM4 750 aa9.68□□□□□ -0.86
CMTM1-210ENST00000528441 SGSM1Q2NKQ1 1148 aa9.68□□□□□ -0.86
CMTM1-210ENST00000528441 CCDC40Q4G0X9 1142 aa9.68□□□□□ -0.86
CMTM1-210ENST00000528441 SCARA3Q6AZY7 606 aa9.68□□□□□ -0.86
CMTM1-210ENST00000528441 DENND5BQ6ZUT9 1274 aa9.68□□□□□ -0.86
CMTM1-210ENST00000528441 CREBRFQ8IUR6 639 aa9.68□□□□□ -0.86
CMTM1-210ENST00000528441 SLC9A9Q8IVB4 645 aa9.68□□□□□ -0.86
CMTM1-210ENST00000528441 MFSD6LQ8IWD5 586 aa9.68□□□□□ -0.86
CMTM1-210ENST00000528441 PJA1Q8NG27 643 aa9.68□□□□□ -0.86
CMTM1-210ENST00000528441 BPIFB1Q8TDL5 484 aa9.68□□□□□ -0.86
CMTM1-210ENST00000528441 PARD3BQ8TEW8 1205 aa9.68□□□□□ -0.86
CMTM1-210ENST00000528441 FAM3CQ92520 227 aa9.68□□□□□ -0.86
CMTM1-210ENST00000528441 DNASE1L2Q92874 299 aa9.68□□□□□ -0.86
CMTM1-210ENST00000528441 JAKMIP2Q96AA8 810 aa9.68□□□□□ -0.86
CMTM1-210ENST00000528441 ELMO3Q96BJ8 720 aa9.68□□□□□ -0.86
CMTM1-210ENST00000528441 EEF2KMTQ96G04 330 aa9.68□□□□□ -0.86
CMTM1-210ENST00000528441 FUBP3Q96I24 572 aaKnown RBP eCLIP9.68□□□□□ -0.86
CMTM1-210ENST00000528441 ELOVL4Q9GZR5 314 aa9.68□□□□□ -0.86
CMTM1-210ENST00000528441 KCTD10Q9H3F6 313 aa9.68□□□□□ -0.86
CMTM1-210ENST00000528441 ABCB6Q9NP58 842 aa9.68□□□□□ -0.86
CMTM1-210ENST00000528441 TRPM5Q9NZQ8 1165 aa9.68□□□□□ -0.86
CMTM1-210ENST00000528441 PIAS3Q9Y6X2 628 aa9.68□□□□□ -0.86
CMTM1-210ENST00000528441 TICRRQ7Z2Z1 1910 aa9.68□□□□□ -0.86
CMTM1-210ENST00000528441 FAM237AA0A1B0GTK4 181 aa9.67□□□□□ -0.86
CMTM1-210ENST00000528441 TACC1O75410 805 aa9.67□□□□□ -0.86
CMTM1-210ENST00000528441 MOSPD3O75425 235 aa9.67□□□□□ -0.86
CMTM1-210ENST00000528441 HLA-DRAP01903 254 aa9.67□□□□□ -0.86
CMTM1-210ENST00000528441 NPR3P17342 541 aa9.67□□□□□ -0.86
CMTM1-210ENST00000528441 PTPN1P18031 435 aaKnown RBP9.67□□□□□ -0.86
CMTM1-210ENST00000528441 IFNAR2P48551 515 aa9.67□□□□□ -0.86
CMTM1-210ENST00000528441 MRE11P49959 708 aa9.67□□□□□ -0.86
CMTM1-210ENST00000528441 MXI1P50539 228 aa9.67□□□□□ -0.86
CMTM1-210ENST00000528441 PDE6CP51160 858 aa9.67□□□□□ -0.86
CMTM1-210ENST00000528441 CDH8P55286 799 aa9.67□□□□□ -0.86
CMTM1-210ENST00000528441 NLRP12P59046 1061 aa9.67□□□□□ -0.86
CMTM1-210ENST00000528441 TCF15Q12870 199 aa9.67□□□□□ -0.86
CMTM1-210ENST00000528441 ORC1Q13415 861 aa9.67□□□□□ -0.86
CMTM1-210ENST00000528441 ARHGAP29Q52LW3 1261 aa9.67□□□□□ -0.86
CMTM1-210ENST00000528441 WDR44Q5JSH3 913 aa9.67□□□□□ -0.86
CMTM1-210ENST00000528441 ZNF658Q5TYW1 1059 aaPredicted RBP9.67□□□□□ -0.86
CMTM1-210ENST00000528441 TXNDC8Q6A555 127 aa9.67□□□□□ -0.86
CMTM1-210ENST00000528441 SPOPLQ6IQ16 392 aa9.67□□□□□ -0.86
CMTM1-210ENST00000528441 PHLDB3Q6NSJ2 640 aa9.67□□□□□ -0.86
CMTM1-210ENST00000528441 VSTM1Q6UX27 236 aa9.67□□□□□ -0.86
CMTM1-210ENST00000528441 GAREM2Q75VX8 874 aa9.67□□□□□ -0.86
CMTM1-210ENST00000528441 CCDC105Q8IYK2 499 aa9.67□□□□□ -0.86
CMTM1-210ENST00000528441 FMR1NBQ8N0W7 255 aaPredicted RBP9.67□□□□□ -0.86
CMTM1-210ENST00000528441 CELF5Q8N6W0 485 aaKnown RBP9.67□□□□□ -0.86
CMTM1-210ENST00000528441 B3GALNT2Q8NCR0 500 aa9.67□□□□□ -0.86
CMTM1-210ENST00000528441 MYCBPAPQ8TBZ2 947 aa9.67□□□□□ -0.86
CMTM1-210ENST00000528441 KBTBD7Q8WVZ9 684 aa9.67□□□□□ -0.86
CMTM1-210ENST00000528441 ZNF516Q92618 1163 aa9.67□□□□□ -0.86
CMTM1-210ENST00000528441 PCED1BQ96HM7 432 aa9.67□□□□□ -0.86
CMTM1-210ENST00000528441 ZFYVE19Q96K21 471 aa9.67□□□□□ -0.86
CMTM1-210ENST00000528441 SLITRK1Q96PX8 696 aa9.67□□□□□ -0.86
CMTM1-210ENST00000528441 GTPBP4Q9BZE4 634 aaKnown RBP9.67□□□□□ -0.86
CMTM1-210ENST00000528441 DPEP3Q9H4B8 488 aa9.67□□□□□ -0.86
CMTM1-210ENST00000528441 LTB4R2Q9NPC1 389 aa9.67□□□□□ -0.86
CMTM1-210ENST00000528441 CRTAC1Q9NQ79 661 aa9.67□□□□□ -0.86
CMTM1-210ENST00000528441 ZMYM5Q9UJ78 669 aa9.67□□□□□ -0.86
CMTM1-210ENST00000528441 TRAF3IP3Q9Y228 551 aa9.67□□□□□ -0.86
CMTM1-210ENST00000528441 ZDBF2Q9HCK1 2354 aa9.67□□□□□ -0.86
CMTM1-210ENST00000528441 NUP210Q8TEM1 1887 aaPredicted RBP9.66□□□□□ -0.86
CMTM1-210ENST00000528441 F8VP50 259 aa9.66□□□□□ -0.86
CMTM1-210ENST00000528441 BIN1O00499 593 aa9.66□□□□□ -0.86
CMTM1-210ENST00000528441 CLDN5O00501 218 aa9.66□□□□□ -0.86
CMTM1-210ENST00000528441 GABRDO14764 452 aa9.66□□□□□ -0.86
CMTM1-210ENST00000528441 CHADO15335 359 aa9.66□□□□□ -0.86
CMTM1-210ENST00000528441 LRRN2O75325 713 aa9.66□□□□□ -0.86
CMTM1-210ENST00000528441 AP1G2O75843 785 aa9.66□□□□□ -0.86
CMTM1-210ENST00000528441 AKAP3O75969 853 aa9.66□□□□□ -0.86
CMTM1-210ENST00000528441 C4BPAP04003 597 aaKnown RBP9.66□□□□□ -0.86
CMTM1-210ENST00000528441 USP17L7P0C7H9 530 aa9.66□□□□□ -0.86
CMTM1-210ENST00000528441 FCARP24071 287 aa9.66□□□□□ -0.86
CMTM1-210ENST00000528441 CCNE1P24864 410 aa9.66□□□□□ -0.86
CMTM1-210ENST00000528441 ADORA2BP29275 332 aa9.66□□□□□ -0.86
CMTM1-210ENST00000528441 PRCPP42785 496 aa9.66□□□□□ -0.86
CMTM1-210ENST00000528441 STARD6P59095 220 aa9.66□□□□□ -0.86
CMTM1-210ENST00000528441 NOP14P78316 857 aaKnown RBP9.66□□□□□ -0.86
CMTM1-210ENST00000528441 PLCB2Q00722 1185 aa9.66□□□□□ -0.86
CMTM1-210ENST00000528441 LRRC32Q14392 662 aa9.66□□□□□ -0.86
CMTM1-210ENST00000528441 PPP2R5DQ14738 602 aa9.66□□□□□ -0.86
CMTM1-210ENST00000528441 ZACNQ401N2 412 aa9.66□□□□□ -0.86
CMTM1-210ENST00000528441 CFAP221Q4G0U5 840 aa9.66□□□□□ -0.86
CMTM1-210ENST00000528441 ZC3H14Q6PJT7 736 aaKnown RBP9.66□□□□□ -0.86
CMTM1-210ENST00000528441 SV2AQ7L0J3 742 aa9.66□□□□□ -0.86
CMTM1-210ENST00000528441 ACOT1Q86TX2 421 aa9.66□□□□□ -0.86
CMTM1-210ENST00000528441 CMTM8Q8IZV2 173 aa9.66□□□□□ -0.86
CMTM1-210ENST00000528441 PLEKHO2Q8TD55 490 aa9.66□□□□□ -0.86
CMTM1-210ENST00000528441 TAF4BQ92750 862 aa9.66□□□□□ -0.86
CMTM1-210ENST00000528441 FBXO32Q969P5 355 aa9.66□□□□□ -0.86
CMTM1-210ENST00000528441 EXOC4Q96A65 974 aa9.66□□□□□ -0.86
CMTM1-210ENST00000528441 GSDMAQ96QA5 445 aa9.66□□□□□ -0.86
CMTM1-210ENST00000528441 NELL2Q99435 816 aa9.66□□□□□ -0.86
CMTM1-210ENST00000528441 LRRC3Q9BY71 257 aa9.66□□□□□ -0.86
CMTM1-210ENST00000528441 ZNF518BQ9C0D4 1074 aa9.66□□□□□ -0.86
CMTM1-210ENST00000528441 KIF9Q9HAQ2 790 aa9.66□□□□□ -0.86
CMTM1-210ENST00000528441 FAM49BQ9NUQ9 324 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms