RNA–Protein interactions for RNA: ENST00000528414.5

PTPN22-207, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-207ENST00000528414 OPTNQ96CV9 577 aa3.93□□□□□ -1.78
PTPN22-207ENST00000528414 CDK5RAP1Q96SZ6 601 aaKnown RBP3.93□□□□□ -1.78
PTPN22-207ENST00000528414 SDF4Q9BRK5 362 aa3.93□□□□□ -1.78
PTPN22-207ENST00000528414 SENP6Q9GZR1 1112 aaPredicted RBP3.93□□□□□ -1.78
PTPN22-207ENST00000528414 PREBQ9HCU5 417 aa3.93□□□□□ -1.78
PTPN22-207ENST00000528414 NPDC1Q9NQX5 325 aaPredicted RBP3.93□□□□□ -1.78
PTPN22-207ENST00000528414 TBCCD1Q9NVR7 557 aa3.93□□□□□ -1.78
PTPN22-207ENST00000528414 PAQR5Q9NXK6 330 aaPredicted RBP3.93□□□□□ -1.78
PTPN22-207ENST00000528414 OR6C2Q9NZP2 312 aa3.93□□□□□ -1.78
PTPN22-207ENST00000528414 MORF4L1Q9UBU8 362 aa3.93□□□□□ -1.78
PTPN22-207ENST00000528414 CLEC11AQ9Y240 323 aa3.93□□□□□ -1.78
PTPN22-207ENST00000528414 PNMA6FA0A0J9YX94 578 aa3.93□□□□□ -1.78
PTPN22-207ENST00000528414 A0A1W2PPH5 198 aa3.93□□□□□ -1.78
PTPN22-207ENST00000528414 WDR46O15213 610 aaKnown RBP3.93□□□□□ -1.78
PTPN22-207ENST00000528414 GPR39O43194 453 aa3.93□□□□□ -1.78
PTPN22-207ENST00000528414 RB1P06400 928 aa3.93□□□□□ -1.78
PTPN22-207ENST00000528414 RARBP10826 455 aa3.93□□□□□ -1.78
PTPN22-207ENST00000528414 IL1R1P14778 569 aa3.93□□□□□ -1.78
PTPN22-207ENST00000528414 ARF4P18085 180 aaPredicted RBP3.93□□□□□ -1.78
PTPN22-207ENST00000528414 IL32P24001 234 aa3.93□□□□□ -1.78
PTPN22-207ENST00000528414 ARCN1P48444 511 aaKnown RBP3.93□□□□□ -1.78
PTPN22-207ENST00000528414 DRG2P55039 364 aaKnown RBP3.93□□□□□ -1.78
PTPN22-207ENST00000528414 EIF6P56537 245 aaKnown RBP3.93□□□□□ -1.78
PTPN22-207ENST00000528414 ACTN3Q08043 901 aaPredicted RBP3.93□□□□□ -1.78
PTPN22-207ENST00000528414 DUSP4Q13115 394 aa3.93□□□□□ -1.78
PTPN22-207ENST00000528414 GRAPQ13588 217 aa3.93□□□□□ -1.78
PTPN22-207ENST00000528414 CUL3Q13618 768 aa3.93□□□□□ -1.78
PTPN22-207ENST00000528414 ERV3-1Q14264 604 aa3.93□□□□□ -1.78
PTPN22-207ENST00000528414 NONOQ15233 471 aaKnown RBP eCLIP3.93□□□□□ -1.78
PTPN22-207ENST00000528414 CCDC153Q494R4 210 aa3.93□□□□□ -1.78
PTPN22-207ENST00000528414 FAM182BQ5T319 152 aa3.93□□□□□ -1.78
PTPN22-207ENST00000528414 PPP1R26Q5T8A7 1209 aaPredicted RBP3.93□□□□□ -1.78
PTPN22-207ENST00000528414 OLFML2BQ68BL8 750 aa3.93□□□□□ -1.78
PTPN22-207ENST00000528414 ATL3Q6DD88 541 aa3.93□□□□□ -1.78
PTPN22-207ENST00000528414 CSGALNACT2Q8N6G5 542 aa3.93□□□□□ -1.78
PTPN22-207ENST00000528414 CCDC155Q8N6L0 562 aa3.93□□□□□ -1.78
PTPN22-207ENST00000528414 ZNF321PQ8N8H1 164 aa3.93□□□□□ -1.78
PTPN22-207ENST00000528414 TTLQ8NG68 377 aa3.93□□□□□ -1.78
PTPN22-207ENST00000528414 RIN3Q8TB24 985 aa3.93□□□□□ -1.78
PTPN22-207ENST00000528414 GRAPLQ8TC17 118 aaPredicted RBP3.93□□□□□ -1.78
PTPN22-207ENST00000528414 LPPQ93052 612 aa3.93□□□□□ -1.78
PTPN22-207ENST00000528414 SLC22A18Q96BI1 424 aa3.93□□□□□ -1.78
PTPN22-207ENST00000528414 FAM83CQ9BQN1 747 aa3.93□□□□□ -1.78
PTPN22-207ENST00000528414 MKNK1Q9BUB5 465 aa3.93□□□□□ -1.78
PTPN22-207ENST00000528414 STRA6Q9BX79 667 aa3.93□□□□□ -1.78
PTPN22-207ENST00000528414 PINK1Q9BXM7 581 aa3.93□□□□□ -1.78
PTPN22-207ENST00000528414 ARHGAP39Q9C0H5 1083 aa3.93□□□□□ -1.78
PTPN22-207ENST00000528414 GBA3Q9H227 469 aa3.93□□□□□ -1.78
PTPN22-207ENST00000528414 GBA2Q9HCG7 927 aaPredicted RBP3.93□□□□□ -1.78
PTPN22-207ENST00000528414 C8orf4Q9NR00 106 aa3.93□□□□□ -1.78
PTPN22-207ENST00000528414 KBTBD4Q9NVX7 518 aa3.93□□□□□ -1.78
PTPN22-207ENST00000528414 SLC7A8Q9UHI5 535 aa3.93□□□□□ -1.78
PTPN22-207ENST00000528414 APOBEC2Q9Y235 224 aaKnown RBP3.93□□□□□ -1.78
PTPN22-207ENST00000528414 USP16Q9Y5T5 823 aa3.93□□□□□ -1.78
PTPN22-207ENST00000528414 GRIN2DO15399 1336 aa3.93□□□□□ -1.78
PTPN22-207ENST00000528414 IQANK1A0A1B0GTG1 560 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 KRT87PA6NCN2 255 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 C19orf67A6NJJ6 358 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 SNPHO15079 494 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 PRPSAP2O60256 369 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 NPTXRO95502 500 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 PLATP00750 562 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 PRKACAP17612 351 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 GNA15P30679 374 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 SOX5P35711 763 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 SOX11P35716 441 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 VCPP55072 806 aaKnown RBP3.92□□□□□ -1.78
PTPN22-207ENST00000528414 STARD6P59095 220 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 DGKZQ13574 1117 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 SEPT6Q14141 434 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 MBTPS1Q14703 1052 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 STILQ15468 1287 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 RTP2Q5QGT7 225 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 PDPK2PQ6A1A2 396 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 GPR139Q6DWJ6 353 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 PDZD4Q76G19 769 aaPredicted RBP3.92□□□□□ -1.78
PTPN22-207ENST00000528414 RHOUQ7L0Q8 258 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 GAS2L3Q86XJ1 694 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 RASEFQ8IZ41 740 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 OR8H3Q8N146 312 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 CNTD1Q8N815 330 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 ANKS4BQ8N8V4 417 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 POC1BQ8TC44 478 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 LRRN4Q8WUT4 740 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 GATAD2BQ8WXI9 593 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 TNFRSF25Q93038 417 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 FAM149B1Q96BN6 582 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 MS4A4AQ96JQ5 239 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 CABS1Q96KC9 395 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 CLUHP3Q96NS8 147 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 PPP1R16BQ96T49 567 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 ESYT1Q9BSJ8 1104 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 C1QTNF1Q9BXJ1 281 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 NUSAP1Q9BXS6 441 aaKnown RBP3.92□□□□□ -1.78
PTPN22-207ENST00000528414 MTMR10Q9NXD2 777 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 AASSQ9UDR5 926 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 KIAA1024Q9UPX6 916 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 ERVK-19Q9WJR5 959 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 NOX1Q9Y5S8 564 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 PTPRCP08575 1304 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms