RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 PIK3CAP42336 1068 aa35.22■■■■□ 3.23
SSSCA1-205ENST00000527920 ARHGAP29Q52LW3 1261 aa35.22■■■■□ 3.23
SSSCA1-205ENST00000527920 CELF5Q8N6W0 485 aaKnown RBP35.22■■■■□ 3.23
SSSCA1-205ENST00000527920 MSANTD3Q96H12 275 aa35.22■■■■□ 3.23
SSSCA1-205ENST00000527920 TNIP3Q96KP6 325 aa35.22■■■■□ 3.23
SSSCA1-205ENST00000527920 LRRC3BQ96PB8 259 aa35.22■■■■□ 3.23
SSSCA1-205ENST00000527920 DPEP3Q9H4B8 488 aa35.22■■■■□ 3.23
SSSCA1-205ENST00000527920 EHD2Q9NZN4 543 aa35.22■■■■□ 3.23
SSSCA1-205ENST00000527920 COL4A2P08572 1712 aa35.21■■■■□ 3.23
SSSCA1-205ENST00000527920 SHISA7A6NL88 538 aa35.21■■■■□ 3.23
SSSCA1-205ENST00000527920 CETN3O15182 167 aa35.21■■■■□ 3.23
SSSCA1-205ENST00000527920 HLA-DRAP01903 254 aa35.21■■■■□ 3.23
SSSCA1-205ENST00000527920 ANXA13P27216 316 aa35.21■■■■□ 3.23
SSSCA1-205ENST00000527920 AVPR1AP37288 418 aa35.21■■■■□ 3.23
SSSCA1-205ENST00000527920 GRIK1P39086 918 aa35.21■■■■□ 3.23
SSSCA1-205ENST00000527920 PLCB2Q00722 1185 aa35.21■■■■□ 3.23
SSSCA1-205ENST00000527920 UBXN2BQ14CS0 331 aa35.21■■■■□ 3.23
SSSCA1-205ENST00000527920 BPIFB1Q8TDL5 484 aa35.21■■■■□ 3.23
SSSCA1-205ENST00000527920 KIF9Q9HAQ2 790 aa35.21■■■■□ 3.23
SSSCA1-205ENST00000527920 FAM170BA6NMN3 283 aa35.2■■■■□ 3.23
SSSCA1-205ENST00000527920 KINO60870 393 aaKnown RBP35.2■■■■□ 3.23
SSSCA1-205ENST00000527920 CLSTN1O94985 981 aa35.2■■■■□ 3.23
SSSCA1-205ENST00000527920 CDH8P55286 799 aa35.2■■■■□ 3.23
SSSCA1-205ENST00000527920 ANGPT1Q15389 498 aa35.2■■■■□ 3.23
SSSCA1-205ENST00000527920 C1orf228Q6PIY5 440 aa35.2■■■■□ 3.23
SSSCA1-205ENST00000527920 MAB21L3Q8N8X9 362 aa35.2■■■■□ 3.23
SSSCA1-205ENST00000527920 CLDN23Q96B33 292 aa35.2■■■■□ 3.23
SSSCA1-205ENST00000527920 TTLL2Q9BWV7 592 aa35.2■■■■□ 3.23
SSSCA1-205ENST00000527920 IMPG2Q9BZV3 1241 aa35.2■■■■□ 3.23
SSSCA1-205ENST00000527920 NCAM2O15394 837 aa35.19■■■■□ 3.22
SSSCA1-205ENST00000527920 TRIM49P0CI25 452 aa35.19■■■■□ 3.22
SSSCA1-205ENST00000527920 TRIM49CP0CI26 452 aa35.19■■■■□ 3.22
SSSCA1-205ENST00000527920 MRE11P49959 708 aa35.19■■■■□ 3.22
SSSCA1-205ENST00000527920 NOP14P78316 857 aaKnown RBP35.19■■■■□ 3.22
SSSCA1-205ENST00000527920 PPP3CAQ08209 521 aa35.19■■■■□ 3.22
SSSCA1-205ENST00000527920 ZNF268Q14587 947 aaPredicted RBP35.19■■■■□ 3.22
SSSCA1-205ENST00000527920 TXNDC8Q6A555 127 aa35.19■■■■□ 3.22
SSSCA1-205ENST00000527920 SCARA5Q6ZMJ2 495 aa35.19■■■■□ 3.22
SSSCA1-205ENST00000527920 DENND5BQ6ZUT9 1274 aa35.19■■■■□ 3.22
SSSCA1-205ENST00000527920 ZC3H3Q8IXZ2 948 aaKnown RBP35.19■■■■□ 3.22
SSSCA1-205ENST00000527920 ADSSL1Q8N142 457 aa35.19■■■■□ 3.22
SSSCA1-205ENST00000527920 TSG101Q99816 390 aa35.19■■■■□ 3.22
SSSCA1-205ENST00000527920 BCO2Q9BYV7 579 aa35.19■■■■□ 3.22
SSSCA1-205ENST00000527920 SDCBP2Q9H190 292 aa35.19■■■■□ 3.22
SSSCA1-205ENST00000527920 TMEM8AQ9HCN3 771 aa35.19■■■■□ 3.22
SSSCA1-205ENST00000527920 MTF2Q9Y483 593 aaPredicted RBP35.19■■■■□ 3.22
SSSCA1-205ENST00000527920 PIAS3Q9Y6X2 628 aa35.19■■■■□ 3.22
SSSCA1-205ENST00000527920 PTPRDP23468 1912 aa35.18■■■■□ 3.22
SSSCA1-205ENST00000527920 EPB41P11171 864 aaKnown RBP35.18■■■■□ 3.22
SSSCA1-205ENST00000527920 CD72P21854 359 aa35.18■■■■□ 3.22
SSSCA1-205ENST00000527920 TARSP26639 723 aaKnown RBP35.18■■■■□ 3.22
SSSCA1-205ENST00000527920 GCLMP48507 274 aa35.18■■■■□ 3.22
SSSCA1-205ENST00000527920 UNC93AQ86WB7 457 aa35.18■■■■□ 3.22
SSSCA1-205ENST00000527920 CSGALNACT1Q8TDX6 532 aa35.18■■■■□ 3.22
SSSCA1-205ENST00000527920 B3GNT5Q9BYG0 378 aa35.18■■■■□ 3.22
SSSCA1-205ENST00000527920 TDP1Q9NUW8 608 aa35.18■■■■□ 3.22
SSSCA1-205ENST00000527920 THG1LQ9NWX6 298 aaKnown RBP35.18■■■■□ 3.22
SSSCA1-205ENST00000527920 COL4A3Q01955 1670 aa35.17■■■■□ 3.22
SSSCA1-205ENST00000527920 ATP8B3O60423 1300 aa35.17■■■■□ 3.22
SSSCA1-205ENST00000527920 F8VP50 259 aa35.17■■■■□ 3.22
SSSCA1-205ENST00000527920 ASPAP45381 313 aa35.17■■■■□ 3.22
SSSCA1-205ENST00000527920 RPS9P46781 194 aaKnown RBP35.17■■■■□ 3.22
SSSCA1-205ENST00000527920 RAP1GAPP47736 663 aa35.17■■■■□ 3.22
SSSCA1-205ENST00000527920 LRRC63Q05C16 580 aa35.17■■■■□ 3.22
SSSCA1-205ENST00000527920 ZNF687Q8N1G0 1237 aa35.17■■■■□ 3.22
SSSCA1-205ENST00000527920 TAS1R2Q8TE23 839 aa35.17■■■■□ 3.22
SSSCA1-205ENST00000527920 USP13Q92995 863 aaPredicted RBP35.17■■■■□ 3.22
SSSCA1-205ENST00000527920 PHOX2BQ99453 314 aa35.17■■■■□ 3.22
SSSCA1-205ENST00000527920 ZNF518BQ9C0D4 1074 aa35.17■■■■□ 3.22
SSSCA1-205ENST00000527920 C8orf33Q9H7E9 229 aaPredicted RBP35.17■■■■□ 3.22
SSSCA1-205ENST00000527920 FAM86C1Q9NVL1 165 aa35.17■■■■□ 3.22
SSSCA1-205ENST00000527920 DENND4CQ5VZ89 1909 aa35.16■■■■□ 3.22
SSSCA1-205ENST00000527920 PROB1E7EW31 1015 aa35.16■■■■□ 3.22
SSSCA1-205ENST00000527920 SLC16A3O15427 465 aaKnown RBP35.16■■■■□ 3.22
SSSCA1-205ENST00000527920 STX10O60499 249 aa35.16■■■■□ 3.22
SSSCA1-205ENST00000527920 LRRN2O75325 713 aa35.16■■■■□ 3.22
SSSCA1-205ENST00000527920 PFKLP17858 780 aa35.16■■■■□ 3.22
SSSCA1-205ENST00000527920 PPP1R2P41236 205 aa35.16■■■■□ 3.22
SSSCA1-205ENST00000527920 NBL1P41271 181 aa35.16■■■■□ 3.22
SSSCA1-205ENST00000527920 FKBP3Q00688 224 aaKnown RBP35.16■■■■□ 3.22
SSSCA1-205ENST00000527920 GPIHBP1Q8IV16 184 aa35.16■■■■□ 3.22
SSSCA1-205ENST00000527920 ERCC4Q92889 916 aaPredicted RBP35.16■■■■□ 3.22
SSSCA1-205ENST00000527920 PPP3CCP48454 512 aa35.15■■■■□ 3.22
SSSCA1-205ENST00000527920 KRT39Q6A163 491 aa35.15■■■■□ 3.22
SSSCA1-205ENST00000527920 ALYREFQ86V81 257 aaKnown RBP35.15■■■■□ 3.22
SSSCA1-205ENST00000527920 C1orf210Q8IVY1 113 aa35.15■■■■□ 3.22
SSSCA1-205ENST00000527920 CRYBG2Q8N1P7 616 aa35.15■■■■□ 3.22
SSSCA1-205ENST00000527920 FAXDC2Q96IV6 333 aa35.15■■■■□ 3.22
SSSCA1-205ENST00000527920 SMG9Q9H0W8 520 aaKnown RBP35.15■■■■□ 3.22
SSSCA1-205ENST00000527920 CYP3A43Q9HB55 503 aa35.15■■■■□ 3.22
SSSCA1-205ENST00000527920 TMEM30AQ9NV96 361 aa35.15■■■■□ 3.22
SSSCA1-205ENST00000527920 OBSL1O75147 1896 aa35.14■■■■□ 3.22
SSSCA1-205ENST00000527920 INCA1Q0VD86 236 aa35.14■■■■□ 3.22
SSSCA1-205ENST00000527920 STIM1Q13586 685 aa35.14■■■■□ 3.22
SSSCA1-205ENST00000527920 SPOPLQ6IQ16 392 aa35.14■■■■□ 3.22
SSSCA1-205ENST00000527920 FAM3CQ92520 227 aa35.14■■■■□ 3.22
SSSCA1-205ENST00000527920 ELMO3Q96BJ8 720 aa35.14■■■■□ 3.22
SSSCA1-205ENST00000527920 MIA3Q5JRA6 1907 aa35.14■■■■□ 3.22
SSSCA1-205ENST00000527920 TICRRQ7Z2Z1 1910 aa35.13■■■■□ 3.21
SSSCA1-205ENST00000527920 TRAV19A0A0A6YYK7 116 aa35.13■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms