RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 HOXA6P31267 233 aa15.16■□□□□ 0.02
CAPN1-212ENST00000527887 CNR2P34972 360 aa15.16■□□□□ 0.02
CAPN1-212ENST00000527887 GPR15P49685 360 aa15.16■□□□□ 0.02
CAPN1-212ENST00000527887 CDR1P51861 262 aa15.16■□□□□ 0.02
CAPN1-212ENST00000527887 CLDN10P78369 228 aa15.16■□□□□ 0.02
CAPN1-212ENST00000527887 FAM160A1Q05DH4 1040 aa15.16■□□□□ 0.02
CAPN1-212ENST00000527887 RUNX3Q13761 415 aa15.16■□□□□ 0.02
CAPN1-212ENST00000527887 WDR72Q3MJ13 1102 aa15.16■□□□□ 0.02
CAPN1-212ENST00000527887 GPIHBP1Q8IV16 184 aa15.16■□□□□ 0.02
CAPN1-212ENST00000527887 SPRYD3Q8NCJ5 442 aa15.16■□□□□ 0.02
CAPN1-212ENST00000527887 CCDC47Q96A33 483 aaKnown RBP15.16■□□□□ 0.02
CAPN1-212ENST00000527887 ZFYVE19Q96K21 471 aa15.16■□□□□ 0.02
CAPN1-212ENST00000527887 FAM84AQ96KN4 292 aa15.16■□□□□ 0.02
CAPN1-212ENST00000527887 SPATA32Q96LK8 384 aa15.16■□□□□ 0.02
CAPN1-212ENST00000527887 CRTAC1Q9NQ79 661 aa15.16■□□□□ 0.02
CAPN1-212ENST00000527887 DMAC2Q9NW81 257 aa15.16■□□□□ 0.02
CAPN1-212ENST00000527887 MIA3Q5JRA6 1907 aa15.15■□□□□ 0.02
CAPN1-212ENST00000527887 FAM237AA0A1B0GTK4 181 aa15.15■□□□□ 0.02
CAPN1-212ENST00000527887 PHACTR2O75167 634 aa15.15■□□□□ 0.02
CAPN1-212ENST00000527887 ATP2C2O75185 946 aa15.15■□□□□ 0.02
CAPN1-212ENST00000527887 PDGFRBP09619 1106 aa15.15■□□□□ 0.02
CAPN1-212ENST00000527887 PFKFB1P16118 471 aa15.15■□□□□ 0.02
CAPN1-212ENST00000527887 GRIK1P39086 918 aa15.15■□□□□ 0.02
CAPN1-212ENST00000527887 ID4P47928 161 aa15.15■□□□□ 0.02
CAPN1-212ENST00000527887 SOX9P48436 509 aa15.15■□□□□ 0.02
CAPN1-212ENST00000527887 NOP14P78316 857 aaKnown RBP15.15■□□□□ 0.02
CAPN1-212ENST00000527887 STK4Q13043 487 aa15.15■□□□□ 0.02
CAPN1-212ENST00000527887 CCINQ13939 588 aa15.15■□□□□ 0.02
CAPN1-212ENST00000527887 SDHAF4Q5VUM1 108 aa15.15■□□□□ 0.02
CAPN1-212ENST00000527887 TXNDC11Q6PKC3 985 aa15.15■□□□□ 0.02
CAPN1-212ENST00000527887 DENND5BQ6ZUT9 1274 aa15.15■□□□□ 0.02
CAPN1-212ENST00000527887 OR6B3Q8NGW1 331 aa15.15■□□□□ 0.02
CAPN1-212ENST00000527887 PARD3BQ8TEW8 1205 aa15.15■□□□□ 0.02
CAPN1-212ENST00000527887 ZNF516Q92618 1163 aa15.15■□□□□ 0.02
CAPN1-212ENST00000527887 MYLPFQ96A32 169 aa15.15■□□□□ 0.02
CAPN1-212ENST00000527887 C8orf48Q96LL4 319 aa15.15■□□□□ 0.02
CAPN1-212ENST00000527887 HINFPQ9BQA5 517 aa15.15■□□□□ 0.02
CAPN1-212ENST00000527887 TTLL2Q9BWV7 592 aa15.15■□□□□ 0.02
CAPN1-212ENST00000527887 SCAND2PQ9GZW5 306 aaPredicted RBP15.15■□□□□ 0.02
CAPN1-212ENST00000527887 SMG9Q9H0W8 520 aaKnown RBP15.15■□□□□ 0.02
CAPN1-212ENST00000527887 HPSEQ9Y251 543 aa15.15■□□□□ 0.02
CAPN1-212ENST00000527887 COL4A3Q01955 1670 aa15.14■□□□□ 0.01
CAPN1-212ENST00000527887 TRDMT1O14717 391 aaKnown RBP15.14■□□□□ 0.01
CAPN1-212ENST00000527887 TADA3O75528 432 aa15.14■□□□□ 0.01
CAPN1-212ENST00000527887 CKMP06732 381 aa15.14■□□□□ 0.01
CAPN1-212ENST00000527887 P4HA1P13674 534 aa15.14■□□□□ 0.01
CAPN1-212ENST00000527887 PTPN1P18031 435 aaKnown RBP15.14■□□□□ 0.01
CAPN1-212ENST00000527887 BDNFP23560 247 aa15.14■□□□□ 0.01
CAPN1-212ENST00000527887 SYKP43405 635 aa15.14■□□□□ 0.01
CAPN1-212ENST00000527887 PSMC1P62191 440 aaKnown RBP15.14■□□□□ 0.01
CAPN1-212ENST00000527887 CYP27A1Q02318 531 aa15.14■□□□□ 0.01
CAPN1-212ENST00000527887 TNK2Q07912 1038 aa15.14■□□□□ 0.01
CAPN1-212ENST00000527887 GRSF1Q12849 480 aaKnown RBP eCLIP15.14■□□□□ 0.01
CAPN1-212ENST00000527887 GAS6Q14393 721 aa15.14■□□□□ 0.01
CAPN1-212ENST00000527887 KMT5BQ4FZB7 885 aa15.14■□□□□ 0.01
CAPN1-212ENST00000527887 TSSK4Q6SA08 328 aa15.14■□□□□ 0.01
CAPN1-212ENST00000527887 ERMP1Q7Z2K6 904 aa15.14■□□□□ 0.01
CAPN1-212ENST00000527887 CCDC34Q96HJ3 373 aa15.14■□□□□ 0.01
CAPN1-212ENST00000527887 PCED1BQ96HM7 432 aa15.14■□□□□ 0.01
CAPN1-212ENST00000527887 MRPL45Q9BRJ2 306 aaKnown RBP15.14■□□□□ 0.01
CAPN1-212ENST00000527887 ELOVL4Q9GZR5 314 aa15.14■□□□□ 0.01
CAPN1-212ENST00000527887 GZF1Q9H116 711 aaPredicted RBP15.14■□□□□ 0.01
CAPN1-212ENST00000527887 XYLT2Q9H1B5 865 aa15.14■□□□□ 0.01
CAPN1-212ENST00000527887 KCTD10Q9H3F6 313 aa15.14■□□□□ 0.01
CAPN1-212ENST00000527887 TRPM5Q9NZQ8 1165 aa15.14■□□□□ 0.01
CAPN1-212ENST00000527887 NCDNQ9UBB6 729 aa15.14■□□□□ 0.01
CAPN1-212ENST00000527887 CCL26Q9Y258 94 aa15.14■□□□□ 0.01
CAPN1-212ENST00000527887 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.13■□□□□ 0.01
CAPN1-212ENST00000527887 A0A1B0GVL5 298 aa15.13■□□□□ 0.01
CAPN1-212ENST00000527887 A8MXQ7 604 aa15.13■□□□□ 0.01
CAPN1-212ENST00000527887 IKBKBO14920 756 aa15.13■□□□□ 0.01
CAPN1-212ENST00000527887 MAPK13O15264 365 aa15.13■□□□□ 0.01
CAPN1-212ENST00000527887 HCRTO43612 131 aa15.13■□□□□ 0.01
CAPN1-212ENST00000527887 CALUO43852 315 aaPredicted RBP15.13■□□□□ 0.01
CAPN1-212ENST00000527887 ATG13O75143 517 aa15.13■□□□□ 0.01
CAPN1-212ENST00000527887 RPN1P04843 607 aaKnown RBP15.13■□□□□ 0.01
CAPN1-212ENST00000527887 COL4A2P08572 1712 aa15.13■□□□□ 0.01
CAPN1-212ENST00000527887 HDCP19113 662 aa15.13■□□□□ 0.01
CAPN1-212ENST00000527887 SDHBP21912 280 aa15.13■□□□□ 0.01
CAPN1-212ENST00000527887 MYL6P60660 151 aa15.13■□□□□ 0.01
CAPN1-212ENST00000527887 NR1H3Q13133 447 aa15.13■□□□□ 0.01
CAPN1-212ENST00000527887 KCNB1Q14721 858 aa15.13■□□□□ 0.01
CAPN1-212ENST00000527887 MTF1Q14872 753 aa15.13■□□□□ 0.01
CAPN1-212ENST00000527887 PON2Q15165 354 aa15.13■□□□□ 0.01
CAPN1-212ENST00000527887 OTOGLQ3ZCN5 2332 aa15.13■□□□□ 0.01
CAPN1-212ENST00000527887 FBXO43Q4G163 708 aa15.13■□□□□ 0.01
CAPN1-212ENST00000527887 TMEM196Q5HYL7 178 aa15.13■□□□□ 0.01
CAPN1-212ENST00000527887 GRAMD1CQ8IYS0 662 aa15.13■□□□□ 0.01
CAPN1-212ENST00000527887 CPA6Q8N4T0 437 aa15.13■□□□□ 0.01
CAPN1-212ENST00000527887 KIAA0895Q8NCT3 520 aa15.13■□□□□ 0.01
CAPN1-212ENST00000527887 CCDC26Q8TAB7 109 aa15.13■□□□□ 0.01
CAPN1-212ENST00000527887 TTC8Q8TAM2 541 aa15.13■□□□□ 0.01
CAPN1-212ENST00000527887 TMC2Q8TDI7 906 aa15.13■□□□□ 0.01
CAPN1-212ENST00000527887 OSCP1Q8WVF1 389 aa15.13■□□□□ 0.01
CAPN1-212ENST00000527887 TAF4BQ92750 862 aa15.13■□□□□ 0.01
CAPN1-212ENST00000527887 ATP2A3Q93084 1043 aa15.13■□□□□ 0.01
CAPN1-212ENST00000527887 TNIP3Q96KP6 325 aa15.13■□□□□ 0.01
CAPN1-212ENST00000527887 TRPC7Q9HCX4 862 aa15.13■□□□□ 0.01
CAPN1-212ENST00000527887 HPS4Q9NQG7 708 aa15.13■□□□□ 0.01
CAPN1-212ENST00000527887 GCNT4Q9P109 453 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms