RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 KCNT1Q5JUK3 1230 aa15.75■□□□□ 0.11
USP47-207ENST00000527733 KLC3Q6P597 504 aa15.75■□□□□ 0.11
USP47-207ENST00000527733 UNC93AQ86WB7 457 aa15.75■□□□□ 0.11
USP47-207ENST00000527733 SRRM1Q8IYB3 904 aaKnown RBP15.75■□□□□ 0.11
USP47-207ENST00000527733 CD99L2Q8TCZ2 262 aa15.75■□□□□ 0.11
USP47-207ENST00000527733 BSNDQ8WZ55 320 aa15.75■□□□□ 0.11
USP47-207ENST00000527733 AVENQ9NQS1 362 aaPredicted RBP15.75■□□□□ 0.11
USP47-207ENST00000527733 SMAPO00193 183 aa15.75■□□□□ 0.11
USP47-207ENST00000527733 GPC4O75487 556 aa15.75■□□□□ 0.11
USP47-207ENST00000527733 DARSP14868 501 aaKnown RBP15.75■□□□□ 0.11
USP47-207ENST00000527733 PRAMEP78395 509 aa15.75■□□□□ 0.11
USP47-207ENST00000527733 BTG3Q14201 252 aaPredicted RBP15.75■□□□□ 0.11
USP47-207ENST00000527733 MEI1Q5TIA1 1274 aa15.75■□□□□ 0.11
USP47-207ENST00000527733 SHC3Q92529 594 aa15.75■□□□□ 0.11
USP47-207ENST00000527733 ZMYND15Q9H091 742 aa15.75■□□□□ 0.11
USP47-207ENST00000527733 ANGPTL3Q9Y5C1 460 aa15.75■□□□□ 0.11
USP47-207ENST00000527733 EPHB6O15197 1021 aa15.75■□□□□ 0.11
USP47-207ENST00000527733 PSMD3O43242 534 aa15.75■□□□□ 0.11
USP47-207ENST00000527733 STIP1P31948 543 aaKnown RBP15.75■□□□□ 0.11
USP47-207ENST00000527733 ITGA7Q13683 1181 aa15.75■□□□□ 0.11
USP47-207ENST00000527733 FAM171A1Q5VUB5 890 aa15.75■□□□□ 0.11
USP47-207ENST00000527733 OR6P1Q8NGX9 317 aa15.75■□□□□ 0.11
USP47-207ENST00000527733 EXOC4Q96A65 974 aa15.75■□□□□ 0.11
USP47-207ENST00000527733 HDAC11Q96DB2 347 aa15.75■□□□□ 0.11
USP47-207ENST00000527733 TRIM56Q9BRZ2 755 aaKnown RBP15.75■□□□□ 0.11
USP47-207ENST00000527733 PCDHB12Q9Y5F1 795 aa15.75■□□□□ 0.11
USP47-207ENST00000527733 TFDP3Q5H9I0 405 aa15.74■□□□□ 0.11
USP47-207ENST00000527733 MIB1Q86YT6 1006 aa15.74■□□□□ 0.11
USP47-207ENST00000527733 ZDHHC17Q8IUH5 632 aa15.74■□□□□ 0.11
USP47-207ENST00000527733 CEP120Q8N960 986 aa15.74■□□□□ 0.11
USP47-207ENST00000527733 EXD1Q8NHP7 514 aa15.74■□□□□ 0.11
USP47-207ENST00000527733 ARHGEF2Q92974 986 aaKnown RBP15.74■□□□□ 0.11
USP47-207ENST00000527733 ATP6V1E2Q96A05 226 aa15.74■□□□□ 0.11
USP47-207ENST00000527733 RMDN1Q96DB5 314 aa15.74■□□□□ 0.11
USP47-207ENST00000527733 FTHL17Q9BXU8 183 aa15.74■□□□□ 0.11
USP47-207ENST00000527733 PCDHB5Q9Y5E4 795 aa15.74■□□□□ 0.11
USP47-207ENST00000527733 RPTORQ8N122 1335 aa15.74■□□□□ 0.11
USP47-207ENST00000527733 UBR2Q8IWV8 1755 aa15.74■□□□□ 0.11
USP47-207ENST00000527733 SEPT4O43236 478 aa15.74■□□□□ 0.11
USP47-207ENST00000527733 ATP9BO43861 1147 aa15.74■□□□□ 0.11
USP47-207ENST00000527733 MICAL2O94851 1124 aa15.74■□□□□ 0.11
USP47-207ENST00000527733 CRHR2Q13324 411 aa15.74■□□□□ 0.11
USP47-207ENST00000527733 IKBKEQ14164 716 aa15.74■□□□□ 0.11
USP47-207ENST00000527733 STAT4Q14765 748 aa15.74■□□□□ 0.11
USP47-207ENST00000527733 C4orf22Q6V702 233 aa15.74■□□□□ 0.11
USP47-207ENST00000527733 FAM71AQ8IYT1 594 aa15.74■□□□□ 0.11
USP47-207ENST00000527733 CCDC197Q8NCU1 140 aa15.74■□□□□ 0.11
USP47-207ENST00000527733 SLC2A14Q8TDB8 520 aa15.74■□□□□ 0.11
USP47-207ENST00000527733 SCG3Q8WXD2 468 aaKnown RBP15.74■□□□□ 0.11
USP47-207ENST00000527733 IKZF4Q9H2S9 585 aa15.74■□□□□ 0.11
USP47-207ENST00000527733 TXNRD2Q9NNW7 524 aa15.74■□□□□ 0.11
USP47-207ENST00000527733 USP18Q9UMW8 372 aa15.74■□□□□ 0.11
USP47-207ENST00000527733 PJA2O43164 708 aa15.74■□□□□ 0.11
USP47-207ENST00000527733 CD52P31358 61 aa15.74■□□□□ 0.11
USP47-207ENST00000527733 IL31Q6EBC2 164 aa15.74■□□□□ 0.11
USP47-207ENST00000527733 TMC7Q7Z402 723 aa15.74■□□□□ 0.11
USP47-207ENST00000527733 SLFN11Q7Z7L1 901 aa15.74■□□□□ 0.11
USP47-207ENST00000527733 FAM131BQ86XD5 332 aa15.74■□□□□ 0.11
USP47-207ENST00000527733 KRT35Q92764 455 aa15.74■□□□□ 0.11
USP47-207ENST00000527733 NEU2Q9Y3R4 380 aa15.74■□□□□ 0.11
USP47-207ENST00000527733 BAZ2AQ9UIF9 1905 aaKnown RBP15.73■□□□□ 0.11
USP47-207ENST00000527733 NUDT18Q6ZVK8 323 aa15.73■□□□□ 0.11
USP47-207ENST00000527733 ZNF467Q7Z7K2 595 aaPredicted RBP15.73■□□□□ 0.11
USP47-207ENST00000527733 YAF2Q8IY57 180 aa15.73■□□□□ 0.11
USP47-207ENST00000527733 USP33Q8TEY7 942 aa15.73■□□□□ 0.11
USP47-207ENST00000527733 BAP1Q92560 729 aa15.73■□□□□ 0.11
USP47-207ENST00000527733 ASIC4Q96FT7 647 aa15.73■□□□□ 0.11
USP47-207ENST00000527733 SMYD3Q9H7B4 428 aa15.73■□□□□ 0.11
USP47-207ENST00000527733 RNF19AQ9NV58 838 aa15.73■□□□□ 0.11
USP47-207ENST00000527733 TRPM5Q9NZQ8 1165 aa15.73■□□□□ 0.11
USP47-207ENST00000527733 IRF1P10914 325 aa15.73■□□□□ 0.11
USP47-207ENST00000527733 SLC11A2P49281 568 aa15.73■□□□□ 0.11
USP47-207ENST00000527733 MAGOHP61326 146 aaKnown RBP15.73■□□□□ 0.11
USP47-207ENST00000527733 SPARCL1Q14515 664 aa15.73■□□□□ 0.11
USP47-207ENST00000527733 TRMT10CQ7L0Y3 403 aaKnown RBP15.73■□□□□ 0.11
USP47-207ENST00000527733 ACTRT1Q8TDG2 376 aa15.73■□□□□ 0.11
USP47-207ENST00000527733 SMARCD1Q96GM5 515 aa15.73■□□□□ 0.11
USP47-207ENST00000527733 FRMD8P1Q9BZ68 369 aaPredicted RBP15.73■□□□□ 0.11
USP47-207ENST00000527733 PCDHA2Q9Y5H9 948 aa15.73■□□□□ 0.11
USP47-207ENST00000527733 WDR91A4D1P6 747 aa15.73■□□□□ 0.11
USP47-207ENST00000527733 NEMP1O14524 444 aa15.73■□□□□ 0.11
USP47-207ENST00000527733 TSTA3Q13630 321 aaPredicted RBP15.73■□□□□ 0.11
USP47-207ENST00000527733 RAPGEF5Q92565 580 aa15.73■□□□□ 0.11
USP47-207ENST00000527733 DEFB118Q96PH6 123 aa15.73■□□□□ 0.11
USP47-207ENST00000527733 CYTH2Q99418 400 aa15.73■□□□□ 0.11
USP47-207ENST00000527733 AMHP03971 560 aa15.73■□□□□ 0.11
USP47-207ENST00000527733 COPS2P61201 443 aa15.73■□□□□ 0.11
USP47-207ENST00000527733 MAPK7Q13164 816 aa15.73■□□□□ 0.11
USP47-207ENST00000527733 MRPS31Q92665 395 aaKnown RBP15.73■□□□□ 0.11
USP47-207ENST00000527733 ISCUQ9H1K1 167 aa15.73■□□□□ 0.11
USP47-207ENST00000527733 XPNPEP1Q9NQW7 623 aa15.73■□□□□ 0.11
USP47-207ENST00000527733 CHST12Q9NRB3 414 aa15.73■□□□□ 0.11
USP47-207ENST00000527733 ASGR1P07306 291 aa15.72■□□□□ 0.11
USP47-207ENST00000527733 PPP1R2P1Q96PQ5 205 aa15.72■□□□□ 0.11
USP47-207ENST00000527733 ELOVL4Q9GZR5 314 aa15.72■□□□□ 0.11
USP47-207ENST00000527733 DMAP1Q9NPF5 467 aaPredicted RBP15.72■□□□□ 0.11
USP47-207ENST00000527733 VIRMAQ69YN4 1812 aaKnown RBP15.72■□□□□ 0.11
USP47-207ENST00000527733 ASS1P00966 412 aaKnown RBP15.72■□□□□ 0.11
USP47-207ENST00000527733 CARSP49589 748 aaKnown RBP15.72■□□□□ 0.11
USP47-207ENST00000527733 YWHAZP63104 245 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms