RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 F11P03951 625 aa10.66□□□□□ -0.7
CAPN1-210ENST00000527699 CYP11A1P05108 521 aa10.66□□□□□ -0.7
CAPN1-210ENST00000527699 ADRB2P07550 413 aa10.66□□□□□ -0.7
CAPN1-210ENST00000527699 KRT19P08727 400 aa10.66□□□□□ -0.7
CAPN1-210ENST00000527699 POLR2BP30876 1174 aaKnown RBP10.66□□□□□ -0.7
CAPN1-210ENST00000527699 AVPR1AP37288 418 aa10.66□□□□□ -0.7
CAPN1-210ENST00000527699 GALK1P51570 392 aa10.66□□□□□ -0.7
CAPN1-210ENST00000527699 SEC13P55735 322 aa10.66□□□□□ -0.7
CAPN1-210ENST00000527699 GTF2BQ00403 316 aa10.66□□□□□ -0.7
CAPN1-210ENST00000527699 SRSF1Q07955 248 aaKnown RBP eCLIP10.66□□□□□ -0.7
CAPN1-210ENST00000527699 GRSF1Q12849 480 aaKnown RBP eCLIP10.66□□□□□ -0.7
CAPN1-210ENST00000527699 CCINQ13939 588 aa10.66□□□□□ -0.7
CAPN1-210ENST00000527699 KYAT1Q16773 422 aa10.66□□□□□ -0.7
CAPN1-210ENST00000527699 ARL6IP4Q66PJ3 421 aaKnown RBP10.66□□□□□ -0.7
CAPN1-210ENST00000527699 OSTM1Q86WC4 334 aa10.66□□□□□ -0.7
CAPN1-210ENST00000527699 CD302Q8IX05 232 aa10.66□□□□□ -0.7
CAPN1-210ENST00000527699 DCP1BQ8IZD4 617 aaKnown RBP10.66□□□□□ -0.7
CAPN1-210ENST00000527699 RPLP0P6Q8NHW5 317 aa10.66□□□□□ -0.7
CAPN1-210ENST00000527699 GAB3Q8WWW8 586 aa10.66□□□□□ -0.7
CAPN1-210ENST00000527699 LARP4BQ92615 738 aaKnown RBP10.66□□□□□ -0.7
CAPN1-210ENST00000527699 FGFBP2Q9BYJ0 223 aa10.66□□□□□ -0.7
CAPN1-210ENST00000527699 GTF3C4Q9UKN8 822 aa10.66□□□□□ -0.7
CAPN1-210ENST00000527699 PCDHB5Q9Y5E4 795 aa10.66□□□□□ -0.7
CAPN1-210ENST00000527699 WNT6Q9Y6F9 365 aa10.66□□□□□ -0.7
CAPN1-210ENST00000527699 SPTAN1Q13813 2472 aaKnown RBP10.65□□□□□ -0.7
CAPN1-210ENST00000527699 TEX15Q9BXT5 2789 aa10.65□□□□□ -0.7
CAPN1-210ENST00000527699 CAPN9O14815 690 aa10.65□□□□□ -0.7
CAPN1-210ENST00000527699 ATP2C2O75185 946 aa10.65□□□□□ -0.7
CAPN1-210ENST00000527699 ITGB3P05106 788 aa10.65□□□□□ -0.7
CAPN1-210ENST00000527699 HMGA1P17096 107 aaKnown RBP10.65□□□□□ -0.7
CAPN1-210ENST00000527699 ADSSP30520 456 aa10.65□□□□□ -0.7
CAPN1-210ENST00000527699 ZNF131P52739 623 aa10.65□□□□□ -0.7
CAPN1-210ENST00000527699 PLCB2Q00722 1185 aa10.65□□□□□ -0.7
CAPN1-210ENST00000527699 SV2CQ496J9 727 aa10.65□□□□□ -0.7
CAPN1-210ENST00000527699 CC2D1AQ6P1N0 951 aaPredicted RBP10.65□□□□□ -0.7
CAPN1-210ENST00000527699 FAM173BQ6P4H8 233 aa10.65□□□□□ -0.7
CAPN1-210ENST00000527699 PDCL2Q8N4E4 241 aa10.65□□□□□ -0.7
CAPN1-210ENST00000527699 CSGALNACT2Q8N6G5 542 aa10.65□□□□□ -0.7
CAPN1-210ENST00000527699 ARL14EPQ8N8R7 260 aaPredicted RBP10.65□□□□□ -0.7
CAPN1-210ENST00000527699 KRI1Q8N9T8 703 aaKnown RBP10.65□□□□□ -0.7
CAPN1-210ENST00000527699 SPPL2BQ8TCT7 592 aa10.65□□□□□ -0.7
CAPN1-210ENST00000527699 MRPS31Q92665 395 aaKnown RBP10.65□□□□□ -0.7
CAPN1-210ENST00000527699 MSANTD3Q96H12 275 aa10.65□□□□□ -0.7
CAPN1-210ENST00000527699 CLIC6Q96NY7 704 aa10.65□□□□□ -0.7
CAPN1-210ENST00000527699 SLC22A12Q96S37 553 aa10.65□□□□□ -0.7
CAPN1-210ENST00000527699 TPSD1Q9BZJ3 242 aa10.65□□□□□ -0.7
CAPN1-210ENST00000527699 MRPL44Q9H9J2 332 aaKnown RBP10.65□□□□□ -0.7
CAPN1-210ENST00000527699 TDP1Q9NUW8 608 aa10.65□□□□□ -0.7
CAPN1-210ENST00000527699 DDX43Q9NXZ2 648 aaKnown RBP10.65□□□□□ -0.7
CAPN1-210ENST00000527699 OBP2AQ9NY56 170 aa10.65□□□□□ -0.7
CAPN1-210ENST00000527699 DSEQ9UL01 958 aa10.65□□□□□ -0.7
CAPN1-210ENST00000527699 L1RE1Q9UN81 338 aa10.65□□□□□ -0.7
CAPN1-210ENST00000527699 SCN1AP35498 2009 aa10.64□□□□□ -0.71
CAPN1-210ENST00000527699 C2orf78A6NCI8 922 aa10.64□□□□□ -0.71
CAPN1-210ENST00000527699 HUS1O60921 280 aa10.64□□□□□ -0.71
CAPN1-210ENST00000527699 TADA3O75528 432 aa10.64□□□□□ -0.71
CAPN1-210ENST00000527699 GCNT3O95395 438 aa10.64□□□□□ -0.71
CAPN1-210ENST00000527699 IDEP14735 1019 aa10.64□□□□□ -0.71
CAPN1-210ENST00000527699 DDIT3P35638 169 aa10.64□□□□□ -0.71
CAPN1-210ENST00000527699 CASP5P51878 434 aa10.64□□□□□ -0.71
CAPN1-210ENST00000527699 MLLT6P55198 1093 aaPredicted RBP10.64□□□□□ -0.71
CAPN1-210ENST00000527699 PSMC1P62191 440 aaKnown RBP10.64□□□□□ -0.71
CAPN1-210ENST00000527699 TSPY1Q01534 308 aa10.64□□□□□ -0.71
CAPN1-210ENST00000527699 PTPAQ15257 358 aa10.64□□□□□ -0.71
CAPN1-210ENST00000527699 RABEP1Q15276 862 aa10.64□□□□□ -0.71
CAPN1-210ENST00000527699 TMEM196Q5HYL7 178 aa10.64□□□□□ -0.71
CAPN1-210ENST00000527699 SLFN12LQ6IEE8 588 aa10.64□□□□□ -0.71
CAPN1-210ENST00000527699 ZNF720Q7Z2F6 126 aa10.64□□□□□ -0.71
CAPN1-210ENST00000527699 SYCP3Q8IZU3 236 aa10.64□□□□□ -0.71
CAPN1-210ENST00000527699 C1orf127Q8N9H9 656 aa10.64□□□□□ -0.71
CAPN1-210ENST00000527699 AK8Q96MA6 479 aa10.64□□□□□ -0.71
CAPN1-210ENST00000527699 ARID3AQ99856 593 aa10.64□□□□□ -0.71
CAPN1-210ENST00000527699 FAM83CQ9BQN1 747 aa10.64□□□□□ -0.71
CAPN1-210ENST00000527699 LINC00597Q9H2U6 94 aa10.64□□□□□ -0.71
CAPN1-210ENST00000527699 ASB7Q9H672 318 aa10.64□□□□□ -0.71
CAPN1-210ENST00000527699 FOXD4L1Q9NU39 408 aa10.64□□□□□ -0.71
CAPN1-210ENST00000527699 DUS2Q9NX74 493 aaKnown RBP10.64□□□□□ -0.71
CAPN1-210ENST00000527699 CIZ1Q9ULV3 898 aaPredicted RBP10.64□□□□□ -0.71
CAPN1-210ENST00000527699 SRPK3Q9UPE1 567 aa10.64□□□□□ -0.71
CAPN1-210ENST00000527699 DERAQ9Y315 318 aa10.64□□□□□ -0.71
CAPN1-210ENST00000527699 CFAP46Q8IYW2 2715 aa10.64□□□□□ -0.71
CAPN1-210ENST00000527699 DOPEY1Q5JWR5 2465 aa10.63□□□□□ -0.71
CAPN1-210ENST00000527699 TCHHQ07283 1943 aa10.63□□□□□ -0.71
CAPN1-210ENST00000527699 MYMKA6NI61 221 aa10.63□□□□□ -0.71
CAPN1-210ENST00000527699 KHNYNO15037 678 aaKnown RBP10.63□□□□□ -0.71
CAPN1-210ENST00000527699 PRPF6O94906 941 aaKnown RBP10.63□□□□□ -0.71
CAPN1-210ENST00000527699 PAPSS2O95340 614 aaPredicted RBP10.63□□□□□ -0.71
CAPN1-210ENST00000527699 PDGFRBP09619 1106 aa10.63□□□□□ -0.71
CAPN1-210ENST00000527699 CSH1P0DML2 217 aa10.63□□□□□ -0.71
CAPN1-210ENST00000527699 CSH2P0DML3 217 aa10.63□□□□□ -0.71
CAPN1-210ENST00000527699 GBP1P32455 592 aa10.63□□□□□ -0.71
CAPN1-210ENST00000527699 GJA4P35212 333 aa10.63□□□□□ -0.71
CAPN1-210ENST00000527699 LONP1P36776 959 aaKnown RBP10.63□□□□□ -0.71
CAPN1-210ENST00000527699 IFNAR2P48551 515 aa10.63□□□□□ -0.71
CAPN1-210ENST00000527699 DGKEP52429 567 aa10.63□□□□□ -0.71
CAPN1-210ENST00000527699 IFRD2Q12894 506 aaPredicted RBP10.63□□□□□ -0.71
CAPN1-210ENST00000527699 MTF1Q14872 753 aa10.63□□□□□ -0.71
CAPN1-210ENST00000527699 ELF2Q15723 593 aa10.63□□□□□ -0.71
CAPN1-210ENST00000527699 C1orf228Q6PIY5 440 aa10.63□□□□□ -0.71
CAPN1-210ENST00000527699 SPATA2LQ8IUW3 424 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms