RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 CCDC127Q96BQ5 260 aa23.95■■□□□ 1.42
TRAPPC4-208ENST00000527680 DUS2Q9NX74 493 aaKnown RBP23.95■■□□□ 1.42
TRAPPC4-208ENST00000527680 SLC8A2Q9UPR5 921 aa23.95■■□□□ 1.42
TRAPPC4-208ENST00000527680 TRDMT1O14717 391 aaKnown RBP23.94■■□□□ 1.42
TRAPPC4-208ENST00000527680 YEATS4O95619 227 aa23.94■■□□□ 1.42
TRAPPC4-208ENST00000527680 HSP90AA1P07900 732 aaKnown RBP23.94■■□□□ 1.42
TRAPPC4-208ENST00000527680 BDNFP23560 247 aa23.94■■□□□ 1.42
TRAPPC4-208ENST00000527680 MAGEA11P43364 429 aa23.94■■□□□ 1.42
TRAPPC4-208ENST00000527680 IFNAR2P48551 515 aa23.94■■□□□ 1.42
TRAPPC4-208ENST00000527680 GALK1P51570 392 aa23.94■■□□□ 1.42
TRAPPC4-208ENST00000527680 CYP2J2P51589 502 aa23.94■■□□□ 1.42
TRAPPC4-208ENST00000527680 MTF1Q14872 753 aa23.94■■□□□ 1.42
TRAPPC4-208ENST00000527680 SNRNP35Q16560 246 aaKnown RBP23.94■■□□□ 1.42
TRAPPC4-208ENST00000527680 FSTL4Q6MZW2 842 aa23.94■■□□□ 1.42
TRAPPC4-208ENST00000527680 TRAPPC11Q7Z392 1133 aa23.94■■□□□ 1.42
TRAPPC4-208ENST00000527680 CPA6Q8N4T0 437 aa23.94■■□□□ 1.42
TRAPPC4-208ENST00000527680 ARL14EPQ8N8R7 260 aaPredicted RBP23.94■■□□□ 1.42
TRAPPC4-208ENST00000527680 SNX25Q9H3E2 840 aa23.94■■□□□ 1.42
TRAPPC4-208ENST00000527680 POLR2DO15514 142 aaKnown RBP23.93■■□□□ 1.42
TRAPPC4-208ENST00000527680 TADA3O75528 432 aa23.93■■□□□ 1.42
TRAPPC4-208ENST00000527680 HDCP19113 662 aa23.93■■□□□ 1.42
TRAPPC4-208ENST00000527680 ANXA13P27216 316 aa23.93■■□□□ 1.42
TRAPPC4-208ENST00000527680 HOXC13P31276 330 aa23.93■■□□□ 1.42
TRAPPC4-208ENST00000527680 GNL1P36915 607 aaPredicted RBP23.93■■□□□ 1.42
TRAPPC4-208ENST00000527680 PXNP49023 591 aaPredicted RBP23.93■■□□□ 1.42
TRAPPC4-208ENST00000527680 KCNB1Q14721 858 aa23.93■■□□□ 1.42
TRAPPC4-208ENST00000527680 SHC4Q6S5L8 630 aa23.93■■□□□ 1.42
TRAPPC4-208ENST00000527680 HS2ST1Q7LGA3 356 aa23.93■■□□□ 1.42
TRAPPC4-208ENST00000527680 KBTBD7Q8WVZ9 684 aa23.93■■□□□ 1.42
TRAPPC4-208ENST00000527680 MYLPFQ96A32 169 aa23.93■■□□□ 1.42
TRAPPC4-208ENST00000527680 SLC22A12Q96S37 553 aa23.93■■□□□ 1.42
TRAPPC4-208ENST00000527680 P2RY13Q9BPV8 354 aa23.93■■□□□ 1.42
TRAPPC4-208ENST00000527680 C7orf25Q9BPX7 421 aa23.93■■□□□ 1.42
TRAPPC4-208ENST00000527680 AGPAT3Q9NRZ7 376 aa23.93■■□□□ 1.42
TRAPPC4-208ENST00000527680 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.93■■□□□ 1.42
TRAPPC4-208ENST00000527680 OBSL1O75147 1896 aa23.93■■□□□ 1.42
TRAPPC4-208ENST00000527680 CST3P01034 146 aaPredicted RBP23.92■■□□□ 1.42
TRAPPC4-208ENST00000527680 EGFP01133 1207 aa23.92■■□□□ 1.42
TRAPPC4-208ENST00000527680 WARSP23381 471 aaKnown RBP23.92■■□□□ 1.42
TRAPPC4-208ENST00000527680 HOXA6P31267 233 aa23.92■■□□□ 1.42
TRAPPC4-208ENST00000527680 NR1H3Q13133 447 aa23.92■■□□□ 1.42
TRAPPC4-208ENST00000527680 PKN3Q6P5Z2 889 aa23.92■■□□□ 1.42
TRAPPC4-208ENST00000527680 VSTM1Q6UX27 236 aa23.92■■□□□ 1.42
TRAPPC4-208ENST00000527680 EPM2AIP1Q7L775 607 aaPredicted RBP23.92■■□□□ 1.42
TRAPPC4-208ENST00000527680 WDR5BQ86VZ2 330 aa23.92■■□□□ 1.42
TRAPPC4-208ENST00000527680 XXYLT1Q8NBI6 393 aa23.92■■□□□ 1.42
TRAPPC4-208ENST00000527680 OR6B3Q8NGW1 331 aa23.92■■□□□ 1.42
TRAPPC4-208ENST00000527680 RIN3Q8TB24 985 aa23.92■■□□□ 1.42
TRAPPC4-208ENST00000527680 OSCP1Q8WVF1 389 aa23.92■■□□□ 1.42
TRAPPC4-208ENST00000527680 BLZF1Q9H2G9 400 aa23.92■■□□□ 1.42
TRAPPC4-208ENST00000527680 ECT2Q9H8V3 914 aa23.92■■□□□ 1.42
TRAPPC4-208ENST00000527680 CRTAC1Q9NQ79 661 aa23.92■■□□□ 1.42
TRAPPC4-208ENST00000527680 SEMA4GQ9NTN9 838 aa23.92■■□□□ 1.42
TRAPPC4-208ENST00000527680 FAM13BQ9NYF5 915 aa23.92■■□□□ 1.42
TRAPPC4-208ENST00000527680 SDK1Q7Z5N4 2213 aa23.92■■□□□ 1.42
TRAPPC4-208ENST00000527680 DCDC2BA2VCK2 349 aa23.91■■□□□ 1.42
TRAPPC4-208ENST00000527680 C2orf78A6NCI8 922 aa23.91■■□□□ 1.42
TRAPPC4-208ENST00000527680 TGFB1I1O43294 461 aa23.91■■□□□ 1.42
TRAPPC4-208ENST00000527680 LRP3O75074 770 aa23.91■■□□□ 1.42
TRAPPC4-208ENST00000527680 RNF40O75150 1001 aa23.91■■□□□ 1.42
TRAPPC4-208ENST00000527680 DRD1P21728 446 aa23.91■■□□□ 1.42
TRAPPC4-208ENST00000527680 GJA4P35212 333 aa23.91■■□□□ 1.42
TRAPPC4-208ENST00000527680 ME1P48163 572 aa23.91■■□□□ 1.42
TRAPPC4-208ENST00000527680 TNNC1P63316 161 aa23.91■■□□□ 1.42
TRAPPC4-208ENST00000527680 TRPC3Q13507 836 aa23.91■■□□□ 1.42
TRAPPC4-208ENST00000527680 UNC13DQ70J99 1090 aa23.91■■□□□ 1.42
TRAPPC4-208ENST00000527680 ATP2A3Q93084 1043 aa23.91■■□□□ 1.42
TRAPPC4-208ENST00000527680 CHFRQ96EP1 664 aa23.91■■□□□ 1.42
TRAPPC4-208ENST00000527680 SPATA17Q96L03 361 aa23.91■■□□□ 1.42
TRAPPC4-208ENST00000527680 RTKNQ9BST9 563 aa23.91■■□□□ 1.42
TRAPPC4-208ENST00000527680 FBRSL1Q9HCM7 1045 aaKnown RBP23.91■■□□□ 1.42
TRAPPC4-208ENST00000527680 TRPM5Q9NZQ8 1165 aa23.91■■□□□ 1.42
TRAPPC4-208ENST00000527680 WNT6Q9Y6F9 365 aa23.91■■□□□ 1.42
TRAPPC4-208ENST00000527680 CACNA1AO00555 2505 aa23.91■■□□□ 1.42
TRAPPC4-208ENST00000527680 CLSTN1O94985 981 aa23.9■■□□□ 1.42
TRAPPC4-208ENST00000527680 ABL1P00519 1130 aa23.9■■□□□ 1.42
TRAPPC4-208ENST00000527680 CASP1P29466 404 aa23.9■■□□□ 1.42
TRAPPC4-208ENST00000527680 AFMP43652 599 aa23.9■■□□□ 1.42
TRAPPC4-208ENST00000527680 PDE6CP51160 858 aa23.9■■□□□ 1.42
TRAPPC4-208ENST00000527680 SNRPFP62306 86 aaKnown RBP23.9■■□□□ 1.42
TRAPPC4-208ENST00000527680 PSMD2Q13200 908 aa23.9■■□□□ 1.42
TRAPPC4-208ENST00000527680 PSMD6Q15008 389 aa23.9■■□□□ 1.42
TRAPPC4-208ENST00000527680 WDR72Q3MJ13 1102 aa23.9■■□□□ 1.42
TRAPPC4-208ENST00000527680 MDH1BQ5I0G3 518 aa23.9■■□□□ 1.42
TRAPPC4-208ENST00000527680 CNNM4Q6P4Q7 775 aa23.9■■□□□ 1.42
TRAPPC4-208ENST00000527680 DENND5BQ6ZUT9 1274 aa23.9■■□□□ 1.42
TRAPPC4-208ENST00000527680 LIMS2Q7Z4I7 341 aa23.9■■□□□ 1.42
TRAPPC4-208ENST00000527680 FAM160A2Q8N612 972 aaPredicted RBP23.9■■□□□ 1.42
TRAPPC4-208ENST00000527680 MYCBPAPQ8TBZ2 947 aa23.9■■□□□ 1.42
TRAPPC4-208ENST00000527680 SH3RF2Q8TEC5 729 aa23.9■■□□□ 1.42
TRAPPC4-208ENST00000527680 SCFD1Q8WVM8 642 aa23.9■■□□□ 1.42
TRAPPC4-208ENST00000527680 PCED1BQ96HM7 432 aa23.9■■□□□ 1.42
TRAPPC4-208ENST00000527680 MRPL45Q9BRJ2 306 aaKnown RBP23.9■■□□□ 1.42
TRAPPC4-208ENST00000527680 MAGEF1Q9HAY2 307 aa23.9■■□□□ 1.42
TRAPPC4-208ENST00000527680 SLC39A2Q9NP94 309 aa23.9■■□□□ 1.42
TRAPPC4-208ENST00000527680 EHD2Q9NZN4 543 aa23.9■■□□□ 1.42
TRAPPC4-208ENST00000527680 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.89■■□□□ 1.41
TRAPPC4-208ENST00000527680 TRIM66O15016 1216 aa23.89■■□□□ 1.41
TRAPPC4-208ENST00000527680 AXIN1O15169 862 aa23.89■■□□□ 1.41
TRAPPC4-208ENST00000527680 PHACTR2O75167 634 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms