RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 SMTNP53814 917 aa17.51■□□□□ 0.39
CHMP4A-203ENST00000527154 MESP2Q0VG99 397 aa17.51■□□□□ 0.39
CHMP4A-203ENST00000527154 ANKRD1Q15327 319 aa17.51■□□□□ 0.39
CHMP4A-203ENST00000527154 SAFBQ15424 915 aaKnown RBP eCLIP17.51■□□□□ 0.39
CHMP4A-203ENST00000527154 HYIQ5T013 277 aa17.51■□□□□ 0.39
CHMP4A-203ENST00000527154 DCP1BQ8IZD4 617 aaKnown RBP17.51■□□□□ 0.39
CHMP4A-203ENST00000527154 THEM5Q8N1Q8 247 aa17.51■□□□□ 0.39
CHMP4A-203ENST00000527154 HDDC3Q8N4P3 179 aa17.51■□□□□ 0.39
CHMP4A-203ENST00000527154 MINDY1Q8N5J2 469 aa17.51■□□□□ 0.39
CHMP4A-203ENST00000527154 NECAB1Q8N987 351 aa17.51■□□□□ 0.39
CHMP4A-203ENST00000527154 ADAM32Q8TC27 787 aa17.51■□□□□ 0.39
CHMP4A-203ENST00000527154 SH3RF2Q8TEC5 729 aa17.51■□□□□ 0.39
CHMP4A-203ENST00000527154 LRRC15Q8TF66 581 aa17.51■□□□□ 0.39
CHMP4A-203ENST00000527154 FOXP1Q9H334 677 aaPredicted RBP17.51■□□□□ 0.39
CHMP4A-203ENST00000527154 CCDC86Q9H6F5 360 aaKnown RBP17.51■□□□□ 0.39
CHMP4A-203ENST00000527154 ANAPC1Q9H1A4 1944 aa17.51■□□□□ 0.39
CHMP4A-203ENST00000527154 KALRNO60229 2985 aa17.5■□□□□ 0.39
CHMP4A-203ENST00000527154 MAST4O15021 2626 aa17.5■□□□□ 0.39
CHMP4A-203ENST00000527154 TRAV19A0A0A6YYK7 116 aa17.5■□□□□ 0.39
CHMP4A-203ENST00000527154 ARHGAP33O14559 1287 aa17.5■□□□□ 0.39
CHMP4A-203ENST00000527154 ADAM23O75077 832 aa17.5■□□□□ 0.39
CHMP4A-203ENST00000527154 PFKLP17858 780 aa17.5■□□□□ 0.39
CHMP4A-203ENST00000527154 CDR1P51861 262 aa17.5■□□□□ 0.39
CHMP4A-203ENST00000527154 ST3GAL1Q11201 340 aa17.5■□□□□ 0.39
CHMP4A-203ENST00000527154 NFE2Q16621 373 aaPredicted RBP17.5■□□□□ 0.39
CHMP4A-203ENST00000527154 TTC38Q5R3I4 469 aa17.5■□□□□ 0.39
CHMP4A-203ENST00000527154 SLC39A4Q6P5W5 647 aa17.5■□□□□ 0.39
CHMP4A-203ENST00000527154 ARMCX6Q7L4S7 300 aa17.5■□□□□ 0.39
CHMP4A-203ENST00000527154 RABEPKQ7Z6M1 372 aa17.5■□□□□ 0.39
CHMP4A-203ENST00000527154 GLRX5Q86SX6 157 aa17.5■□□□□ 0.39
CHMP4A-203ENST00000527154 SFTPA1Q8IWL2 248 aa17.5■□□□□ 0.39
CHMP4A-203ENST00000527154 CCDC33Q8N5R6 958 aa17.5■□□□□ 0.39
CHMP4A-203ENST00000527154 KCTD17Q8N5Z5 321 aa17.5■□□□□ 0.39
CHMP4A-203ENST00000527154 STKLD1Q8NE28 680 aa17.5■□□□□ 0.39
CHMP4A-203ENST00000527154 ASB7Q9H672 318 aa17.5■□□□□ 0.39
CHMP4A-203ENST00000527154 FSCN3Q9NQT6 498 aa17.5■□□□□ 0.39
CHMP4A-203ENST00000527154 KCND2Q9NZV8 630 aa17.5■□□□□ 0.39
CHMP4A-203ENST00000527154 H0YCG3 227 aa17.49■□□□□ 0.39
CHMP4A-203ENST00000527154 DKK1O94907 266 aa17.49■□□□□ 0.39
CHMP4A-203ENST00000527154 CYP17A1P05093 508 aa17.49■□□□□ 0.39
CHMP4A-203ENST00000527154 SCP2P22307 547 aa17.49■□□□□ 0.39
CHMP4A-203ENST00000527154 TAF6P49848 677 aa17.49■□□□□ 0.39
CHMP4A-203ENST00000527154 SEC13P55735 322 aa17.49■□□□□ 0.39
CHMP4A-203ENST00000527154 POU5F1Q01860 360 aaKnown RBP17.49■□□□□ 0.39
CHMP4A-203ENST00000527154 GFPT1Q06210 699 aaPredicted RBP17.49■□□□□ 0.39
CHMP4A-203ENST00000527154 BYSLQ13895 437 aaKnown RBP17.49■□□□□ 0.39
CHMP4A-203ENST00000527154 TRIM29Q14134 588 aa17.49■□□□□ 0.39
CHMP4A-203ENST00000527154 NBR1Q14596 966 aa17.49■□□□□ 0.39
CHMP4A-203ENST00000527154 ZC2HC1CQ53FD0 456 aaPredicted RBP17.49■□□□□ 0.39
CHMP4A-203ENST00000527154 METTL23Q86XA0 190 aa17.49■□□□□ 0.39
CHMP4A-203ENST00000527154 ADGRG2Q8IZP9 1017 aa17.49■□□□□ 0.39
CHMP4A-203ENST00000527154 PHTF2Q8N3S3 785 aa17.49■□□□□ 0.39
CHMP4A-203ENST00000527154 ALLCQ8N6M5 410 aa17.49■□□□□ 0.39
CHMP4A-203ENST00000527154 ARL14EPQ8N8R7 260 aaPredicted RBP17.49■□□□□ 0.39
CHMP4A-203ENST00000527154 TXNDC5Q8NBS9 432 aaKnown RBP17.49■□□□□ 0.39
CHMP4A-203ENST00000527154 GLIS3Q8NEA6 775 aa17.49■□□□□ 0.39
CHMP4A-203ENST00000527154 CD248Q9HCU0 757 aa17.49■□□□□ 0.39
CHMP4A-203ENST00000527154 ATXN2Q99700 1313 aaKnown RBP17.48■□□□□ 0.39
CHMP4A-203ENST00000527154 URB1O60287 2271 aaKnown RBP17.48■□□□□ 0.39
CHMP4A-203ENST00000527154 AP5Z1O43299 807 aa17.48■□□□□ 0.39
CHMP4A-203ENST00000527154 CBFA2T3O75081 653 aa17.48■□□□□ 0.39
CHMP4A-203ENST00000527154 OLFM2O95897 454 aa17.48■□□□□ 0.39
CHMP4A-203ENST00000527154 CKMP06732 381 aa17.48■□□□□ 0.39
CHMP4A-203ENST00000527154 FTH1P19P0C7X4 201 aa17.48■□□□□ 0.39
CHMP4A-203ENST00000527154 SLC12A3P55017 1021 aa17.48■□□□□ 0.39
CHMP4A-203ENST00000527154 RPL10AP62906 217 aaKnown RBP17.48■□□□□ 0.39
CHMP4A-203ENST00000527154 TMEM132DQ14C87 1099 aa17.48■□□□□ 0.39
CHMP4A-203ENST00000527154 TRIP6Q15654 476 aaKnown RBP17.48■□□□□ 0.39
CHMP4A-203ENST00000527154 IL17AQ16552 155 aa17.48■□□□□ 0.39
CHMP4A-203ENST00000527154 DDR2Q16832 855 aa17.48■□□□□ 0.39
CHMP4A-203ENST00000527154 CFAP221Q4G0U5 840 aa17.48■□□□□ 0.39
CHMP4A-203ENST00000527154 SDHAF4Q5VUM1 108 aa17.48■□□□□ 0.39
CHMP4A-203ENST00000527154 SYT2Q8N9I0 419 aaPredicted RBP17.48■□□□□ 0.39
CHMP4A-203ENST00000527154 ACBD6Q9BR61 282 aa17.48■□□□□ 0.39
CHMP4A-203ENST00000527154 PYM1Q9BRP8 204 aaKnown RBP17.48■□□□□ 0.39
CHMP4A-203ENST00000527154 PI4K2AQ9BTU6 479 aa17.48■□□□□ 0.39
CHMP4A-203ENST00000527154 POLMQ9NP87 494 aaPredicted RBP17.48■□□□□ 0.39
CHMP4A-203ENST00000527154 MAGED2Q9UNF1 606 aaPredicted RBP17.48■□□□□ 0.39
CHMP4A-203ENST00000527154 HELZP42694 1942 aaKnown RBP17.47■□□□□ 0.39
CHMP4A-203ENST00000527154 A0A1W2PQD8 194 aa17.47■□□□□ 0.39
CHMP4A-203ENST00000527154 C2orf78A6NCI8 922 aa17.47■□□□□ 0.39
CHMP4A-203ENST00000527154 PP2D1A8MPX8 630 aa17.47■□□□□ 0.39
CHMP4A-203ENST00000527154 MAP3K13O43283 966 aa17.47■□□□□ 0.39
CHMP4A-203ENST00000527154 PRPF40AO75400 957 aaKnown RBP17.47■□□□□ 0.39
CHMP4A-203ENST00000527154 ZIC2O95409 532 aaPredicted RBP17.47■□□□□ 0.39
CHMP4A-203ENST00000527154 CFIP05156 583 aa17.47■□□□□ 0.39
CHMP4A-203ENST00000527154 ATXN3P54252 364 aaPredicted RBP17.47■□□□□ 0.39
CHMP4A-203ENST00000527154 EOGTQ5NDL2 527 aa17.47■□□□□ 0.39
CHMP4A-203ENST00000527154 KRT79Q5XKE5 535 aa17.47■□□□□ 0.39
CHMP4A-203ENST00000527154 RAB34Q9BZG1 259 aa17.47■□□□□ 0.39
CHMP4A-203ENST00000527154 KIAA1522Q9P206 1035 aaPredicted RBP17.47■□□□□ 0.39
CHMP4A-203ENST00000527154 LARSQ9P2J5 1176 aaKnown RBP17.47■□□□□ 0.39
CHMP4A-203ENST00000527154 RAXQ9Y2V3 346 aa17.47■□□□□ 0.39
CHMP4A-203ENST00000527154 ADAMTS9Q9P2N4 1935 aa17.47■□□□□ 0.39
CHMP4A-203ENST00000527154 A0A087WV48 116 aa17.46■□□□□ 0.39
CHMP4A-203ENST00000527154 KPNA7A9QM74 516 aa17.46■□□□□ 0.39
CHMP4A-203ENST00000527154 HNRNPDLO14979 420 aaKnown RBP17.46■□□□□ 0.39
CHMP4A-203ENST00000527154 SH3BP5O60239 455 aa17.46■□□□□ 0.39
CHMP4A-203ENST00000527154 KAT7O95251 611 aa17.46■□□□□ 0.39
CHMP4A-203ENST00000527154 KLF8O95600 359 aaPredicted RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms