RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 PSMD5Q16401 504 aa13.49□□□□□ -0.25
SSSCA1-203ENST00000526877 TMEM270Q6UE05 265 aa13.49□□□□□ -0.25
SSSCA1-203ENST00000526877 RSPO2Q6UXX9 243 aaPredicted RBP13.49□□□□□ -0.25
SSSCA1-203ENST00000526877 RAD9BQ6WBX8 426 aa13.49□□□□□ -0.25
SSSCA1-203ENST00000526877 PLCD3Q8N3E9 789 aa13.49□□□□□ -0.25
SSSCA1-203ENST00000526877 RBBP8NLQ8NC74 664 aaPredicted RBP13.49□□□□□ -0.25
SSSCA1-203ENST00000526877 KREMEN2Q8NCW0 462 aa13.49□□□□□ -0.25
SSSCA1-203ENST00000526877 WDR6Q9NNW5 1121 aaKnown RBP13.49□□□□□ -0.25
SSSCA1-203ENST00000526877 ZDHHC7Q9NXF8 308 aa13.49□□□□□ -0.25
SSSCA1-203ENST00000526877 GDAP2Q9NXN4 497 aa13.49□□□□□ -0.25
SSSCA1-203ENST00000526877 PYCARDQ9ULZ3 195 aa13.49□□□□□ -0.25
SSSCA1-203ENST00000526877 CNTN6Q9UQ52 1028 aa13.49□□□□□ -0.25
SSSCA1-203ENST00000526877 HCN4Q9Y3Q4 1203 aa13.49□□□□□ -0.25
SSSCA1-203ENST00000526877 SPDYE4A6NLX3 237 aa13.48□□□□□ -0.25
SSSCA1-203ENST00000526877 EIF3CLB5ME19 914 aaKnown RBP13.48□□□□□ -0.25
SSSCA1-203ENST00000526877 I3L4J1 428 aa13.48□□□□□ -0.25
SSSCA1-203ENST00000526877 ZSCAN12O43309 604 aa13.48□□□□□ -0.25
SSSCA1-203ENST00000526877 ASGR2P07307 311 aa13.48□□□□□ -0.25
SSSCA1-203ENST00000526877 PLEKP08567 350 aaPredicted RBP13.48□□□□□ -0.25
SSSCA1-203ENST00000526877 FAM163BP0C2L3 166 aa13.48□□□□□ -0.25
SSSCA1-203ENST00000526877 TNFAIP3P21580 790 aa13.48□□□□□ -0.25
SSSCA1-203ENST00000526877 TKTP29401 623 aaKnown RBP13.48□□□□□ -0.25
SSSCA1-203ENST00000526877 CLCN1P35523 988 aa13.48□□□□□ -0.25
SSSCA1-203ENST00000526877 KIF11P52732 1056 aa13.48□□□□□ -0.25
SSSCA1-203ENST00000526877 CDH8P55286 799 aa13.48□□□□□ -0.25
SSSCA1-203ENST00000526877 KRT83P78385 493 aa13.48□□□□□ -0.25
SSSCA1-203ENST00000526877 RAB33AQ14088 237 aa13.48□□□□□ -0.25
SSSCA1-203ENST00000526877 MTF1Q14872 753 aa13.48□□□□□ -0.25
SSSCA1-203ENST00000526877 ELMSAN1Q6PJG2 1045 aa13.48□□□□□ -0.25
SSSCA1-203ENST00000526877 DSTYKQ6XUX3 929 aa13.48□□□□□ -0.25
SSSCA1-203ENST00000526877 CCDC149Q6ZUS6 474 aa13.48□□□□□ -0.25
SSSCA1-203ENST00000526877 DPH6Q7L8W6 267 aa13.48□□□□□ -0.25
SSSCA1-203ENST00000526877 OTOP3Q7RTS5 596 aa13.48□□□□□ -0.25
SSSCA1-203ENST00000526877 ZNF571Q7Z3V5 609 aaPredicted RBP13.48□□□□□ -0.25
SSSCA1-203ENST00000526877 ZNF677Q86XU0 584 aa13.48□□□□□ -0.25
SSSCA1-203ENST00000526877 UBR7Q8N806 425 aa13.48□□□□□ -0.25
SSSCA1-203ENST00000526877 TDRD5Q8NAT2 981 aaKnown RBP13.48□□□□□ -0.25
SSSCA1-203ENST00000526877 APPL2Q8NEU8 664 aa13.48□□□□□ -0.25
SSSCA1-203ENST00000526877 KIAA1524Q8TCG1 905 aa13.48□□□□□ -0.25
SSSCA1-203ENST00000526877 SMG7Q92540 1137 aaKnown RBP13.48□□□□□ -0.25
SSSCA1-203ENST00000526877 PBXIP1Q96AQ6 731 aa13.48□□□□□ -0.25
SSSCA1-203ENST00000526877 EIF3CQ99613 913 aaKnown RBP13.48□□□□□ -0.25
SSSCA1-203ENST00000526877 AGPAT1Q99943 283 aa13.48□□□□□ -0.25
SSSCA1-203ENST00000526877 PRKD2Q9BZL6 878 aa13.48□□□□□ -0.25
SSSCA1-203ENST00000526877 SMOC2Q9H3U7 446 aa13.48□□□□□ -0.25
SSSCA1-203ENST00000526877 SMYD3Q9H7B4 428 aa13.48□□□□□ -0.25
SSSCA1-203ENST00000526877 LUC7LQ9NQ29 371 aaKnown RBP13.48□□□□□ -0.25
SSSCA1-203ENST00000526877 MTRRQ9UBK8 725 aa13.48□□□□□ -0.25
SSSCA1-203ENST00000526877 FBXW11Q9UKB1 542 aa13.48□□□□□ -0.25
SSSCA1-203ENST00000526877 SORCS3Q9UPU3 1222 aa13.48□□□□□ -0.25
SSSCA1-203ENST00000526877 BACE2Q9Y5Z0 518 aa13.48□□□□□ -0.25
SSSCA1-203ENST00000526877 NOTCH4Q99466 2003 aa13.47□□□□□ -0.25
SSSCA1-203ENST00000526877 ARHGEF37A1IGU5 675 aa13.47□□□□□ -0.25
SSSCA1-203ENST00000526877 SPTLC1O15269 473 aa13.47□□□□□ -0.25
SSSCA1-203ENST00000526877 TRAPPC3O43617 180 aa13.47□□□□□ -0.25
SSSCA1-203ENST00000526877 TBC1D4O60343 1298 aa13.47□□□□□ -0.25
SSSCA1-203ENST00000526877 CCDC175P0C221 793 aa13.47□□□□□ -0.25
SSSCA1-203ENST00000526877 CYP11B1P15538 503 aa13.47□□□□□ -0.25
SSSCA1-203ENST00000526877 OR1D2P34982 312 aa13.47□□□□□ -0.25
SSSCA1-203ENST00000526877 PLA2G5P39877 138 aa13.47□□□□□ -0.25
SSSCA1-203ENST00000526877 RAP1GAPP47736 663 aa13.47□□□□□ -0.25
SSSCA1-203ENST00000526877 MRPL58Q14197 206 aaKnown RBP13.47□□□□□ -0.25
SSSCA1-203ENST00000526877 SLC47A2Q86VL8 602 aa13.47□□□□□ -0.25
SSSCA1-203ENST00000526877 TXLNBQ8N3L3 684 aa13.47□□□□□ -0.25
SSSCA1-203ENST00000526877 TOP6BLQ8N6T0 577 aa13.47□□□□□ -0.25
SSSCA1-203ENST00000526877 ACSF2Q96CM8 615 aaPredicted RBP13.47□□□□□ -0.25
SSSCA1-203ENST00000526877 SDCBP2Q9H190 292 aa13.47□□□□□ -0.25
SSSCA1-203ENST00000526877 SNX25Q9H3E2 840 aa13.47□□□□□ -0.25
SSSCA1-203ENST00000526877 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.47□□□□□ -0.25
SSSCA1-203ENST00000526877 CLUHO75153 1309 aa13.46□□□□□ -0.25
SSSCA1-203ENST00000526877 ESPNB1AK53 854 aa13.46□□□□□ -0.25
SSSCA1-203ENST00000526877 CYB561D2O14569 222 aa13.46□□□□□ -0.25
SSSCA1-203ENST00000526877 CILPO75339 1184 aa13.46□□□□□ -0.25
SSSCA1-203ENST00000526877 TACC1O75410 805 aa13.46□□□□□ -0.25
SSSCA1-203ENST00000526877 LCA5LO95447 670 aa13.46□□□□□ -0.25
SSSCA1-203ENST00000526877 PAEPP09466 180 aa13.46□□□□□ -0.25
SSSCA1-203ENST00000526877 GNA15P30679 374 aa13.46□□□□□ -0.25
SSSCA1-203ENST00000526877 ZNF132P52740 706 aa13.46□□□□□ -0.25
SSSCA1-203ENST00000526877 CDR2Q01850 454 aa13.46□□□□□ -0.25
SSSCA1-203ENST00000526877 INCA1Q0VD86 236 aa13.46□□□□□ -0.25
SSSCA1-203ENST00000526877 MTMR3Q13615 1198 aa13.46□□□□□ -0.25
SSSCA1-203ENST00000526877 SLC18A3Q16572 532 aa13.46□□□□□ -0.25
SSSCA1-203ENST00000526877 ASTE1Q2TB18 679 aaPredicted RBP13.46□□□□□ -0.25
SSSCA1-203ENST00000526877 ZNF394Q53GI3 561 aa13.46□□□□□ -0.25
SSSCA1-203ENST00000526877 C10orf76Q5T2E6 689 aa13.46□□□□□ -0.25
SSSCA1-203ENST00000526877 TOGARAM2Q6ZUX3 1019 aa13.46□□□□□ -0.25
SSSCA1-203ENST00000526877 ANKS3Q6ZW76 656 aa13.46□□□□□ -0.25
SSSCA1-203ENST00000526877 UNC93AQ86WB7 457 aa13.46□□□□□ -0.25
SSSCA1-203ENST00000526877 UBALD2Q8IYN6 164 aa13.46□□□□□ -0.25
SSSCA1-203ENST00000526877 FBXL6Q8N531 539 aa13.46□□□□□ -0.25
SSSCA1-203ENST00000526877 EPS8L1Q8TE68 723 aa13.46□□□□□ -0.25
SSSCA1-203ENST00000526877 SENP8Q96LD8 212 aa13.46□□□□□ -0.25
SSSCA1-203ENST00000526877 MYADMQ96S97 322 aa13.46□□□□□ -0.25
SSSCA1-203ENST00000526877 NT5C1AQ9BXI3 368 aa13.46□□□□□ -0.25
SSSCA1-203ENST00000526877 PDCL3Q9H2J4 239 aa13.46□□□□□ -0.25
SSSCA1-203ENST00000526877 KCNK12Q9HB15 430 aa13.46□□□□□ -0.25
SSSCA1-203ENST00000526877 SPTLC3Q9NUV7 552 aa13.46□□□□□ -0.25
SSSCA1-203ENST00000526877 SEPT11Q9NVA2 429 aaKnown RBP13.46□□□□□ -0.25
SSSCA1-203ENST00000526877 ADAMTS1Q9UHI8 967 aa13.46□□□□□ -0.25
SSSCA1-203ENST00000526877 PPP2R2CQ9Y2T4 447 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms