RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 SLITRK6Q9H5Y7 841 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 ADAMTS5Q9UNA0 930 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 POLIQ9UNA4 740 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 NQO1P15559 274 aaKnown RBP10.34□□□□□ -0.75
USP35-201ENST00000526425 PSMA2P25787 234 aa10.34□□□□□ -0.75
USP35-201ENST00000526425 TBL3Q12788 808 aaKnown RBP10.34□□□□□ -0.75
USP35-201ENST00000526425 FOXR2Q6PJQ5 311 aa10.34□□□□□ -0.75
USP35-201ENST00000526425 EMC1Q8N766 993 aa10.34□□□□□ -0.75
USP35-201ENST00000526425 AFG1LQ8WV93 481 aa10.34□□□□□ -0.75
USP35-201ENST00000526425 PWWP2AQ96N64 755 aa10.34□□□□□ -0.75
USP35-201ENST00000526425 MAK16Q9BXY0 300 aaKnown RBP10.34□□□□□ -0.75
USP35-201ENST00000526425 C10orf88Q9H8K7 445 aa10.34□□□□□ -0.75
USP35-201ENST00000526425 MRPL47Q9HD33 250 aaKnown RBP10.34□□□□□ -0.75
USP35-201ENST00000526425 PARP2Q9UGN5 583 aa10.34□□□□□ -0.75
USP35-201ENST00000526425 GTF3C4Q9UKN8 822 aa10.34□□□□□ -0.75
USP35-201ENST00000526425 KCNH4Q9UQ05 1017 aa10.34□□□□□ -0.75
USP35-201ENST00000526425 SH3GLB1Q9Y371 365 aa10.34□□□□□ -0.75
USP35-201ENST00000526425 A0A087WZ62 844 aa10.34□□□□□ -0.75
USP35-201ENST00000526425 SOWAHBA6NEL2 793 aa10.34□□□□□ -0.75
USP35-201ENST00000526425 UBOX5O94941 541 aa10.34□□□□□ -0.75
USP35-201ENST00000526425 GARTP22102 1010 aa10.34□□□□□ -0.75
USP35-201ENST00000526425 NAMPTP43490 491 aa10.34□□□□□ -0.75
USP35-201ENST00000526425 SLC29A2Q14542 456 aa10.34□□□□□ -0.75
USP35-201ENST00000526425 UTS2BQ765I0 119 aa10.34□□□□□ -0.75
USP35-201ENST00000526425 SLC13A5Q86YT5 568 aaPredicted RBP10.34□□□□□ -0.75
USP35-201ENST00000526425 FAM71AQ8IYT1 594 aa10.34□□□□□ -0.75
USP35-201ENST00000526425 GDAP1Q8TB36 358 aa10.34□□□□□ -0.75
USP35-201ENST00000526425 SCFD2Q8WU76 684 aa10.34□□□□□ -0.75
USP35-201ENST00000526425 SHC3Q92529 594 aa10.34□□□□□ -0.75
USP35-201ENST00000526425 RAPGEF5Q92565 580 aa10.34□□□□□ -0.75
USP35-201ENST00000526425 ATP6V1G3Q96LB4 118 aa10.34□□□□□ -0.75
USP35-201ENST00000526425 FDXACB1Q9BRP7 624 aaPredicted RBP10.34□□□□□ -0.75
USP35-201ENST00000526425 TXNRD2Q9NNW7 524 aa10.34□□□□□ -0.75
USP35-201ENST00000526425 NGRNQ9NPE2 291 aaKnown RBP10.34□□□□□ -0.75
USP35-201ENST00000526425 RBPJLQ9UBG7 517 aa10.34□□□□□ -0.75
USP35-201ENST00000526425 AGAP1Q9UPQ3 857 aa10.34□□□□□ -0.75
USP35-201ENST00000526425 PHF24Q9UPV7 400 aa10.34□□□□□ -0.75
USP35-201ENST00000526425 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.34□□□□□ -0.75
USP35-201ENST00000526425 DYNC1LI2O43237 492 aaPredicted RBP10.34□□□□□ -0.75
USP35-201ENST00000526425 CST3P01034 146 aaPredicted RBP10.34□□□□□ -0.75
USP35-201ENST00000526425 RARAP10276 462 aa10.34□□□□□ -0.75
USP35-201ENST00000526425 TGFB3P10600 412 aa10.34□□□□□ -0.75
USP35-201ENST00000526425 ADARP55265 1226 aaKnown RBP10.34□□□□□ -0.75
USP35-201ENST00000526425 PSMC1P62191 440 aaKnown RBP10.34□□□□□ -0.75
USP35-201ENST00000526425 TAF1CQ15572 869 aaPredicted RBP10.34□□□□□ -0.75
USP35-201ENST00000526425 KIZQ2M2Z5 673 aa10.34□□□□□ -0.75
USP35-201ENST00000526425 BSPRYQ5W0U4 402 aa10.34□□□□□ -0.75
USP35-201ENST00000526425 EEF1DP3Q658K8 133 aa10.34□□□□□ -0.75
USP35-201ENST00000526425 ILDR2Q71H61 639 aa10.34□□□□□ -0.75
USP35-201ENST00000526425 CATSPER4Q7RTX7 472 aa10.34□□□□□ -0.75
USP35-201ENST00000526425 CCDC33Q8N5R6 958 aa10.34□□□□□ -0.75
USP35-201ENST00000526425 TEX9Q8N6V9 391 aa10.34□□□□□ -0.75
USP35-201ENST00000526425 TMEM35BQ8NCS4 154 aa10.34□□□□□ -0.75
USP35-201ENST00000526425 ARHGEF2Q92974 986 aaKnown RBP10.34□□□□□ -0.75
USP35-201ENST00000526425 FAM167AQ96KS9 214 aa10.34□□□□□ -0.75
USP35-201ENST00000526425 PORCNQ9H237 461 aa10.34□□□□□ -0.75
USP35-201ENST00000526425 FAF1Q9UNN5 650 aaPredicted RBP10.34□□□□□ -0.75
USP35-201ENST00000526425 HEY1Q9Y5J3 304 aa10.34□□□□□ -0.75
USP35-201ENST00000526425 SPO11Q9Y5K1 396 aa10.34□□□□□ -0.75
USP35-201ENST00000526425 PHF2O75151 1096 aa10.33□□□□□ -0.76
USP35-201ENST00000526425 ARIH2O95376 493 aa10.33□□□□□ -0.76
USP35-201ENST00000526425 ITGB3P05106 788 aa10.33□□□□□ -0.76
USP35-201ENST00000526425 KRT16P08779 473 aa10.33□□□□□ -0.76
USP35-201ENST00000526425 TROVE2P10155 538 aaKnown RBP eCLIP10.33□□□□□ -0.76
USP35-201ENST00000526425 CHRNB2P17787 502 aa10.33□□□□□ -0.76
USP35-201ENST00000526425 WNT7BP56706 349 aa10.33□□□□□ -0.76
USP35-201ENST00000526425 RALGDSQ12967 914 aa10.33□□□□□ -0.76
USP35-201ENST00000526425 LONRF1Q17RB8 773 aa10.33□□□□□ -0.76
USP35-201ENST00000526425 FAM117BQ6P1L5 589 aa10.33□□□□□ -0.76
USP35-201ENST00000526425 METTL7BQ6UX53 244 aa10.33□□□□□ -0.76
USP35-201ENST00000526425 CCDC89Q8N998 374 aa10.33□□□□□ -0.76
USP35-201ENST00000526425 TMC2Q8TDI7 906 aa10.33□□□□□ -0.76
USP35-201ENST00000526425 ZNF516Q92618 1163 aa10.33□□□□□ -0.76
USP35-201ENST00000526425 SENP7Q9BQF6 1050 aa10.33□□□□□ -0.76
USP35-201ENST00000526425 MIS12Q9H081 205 aa10.33□□□□□ -0.76
USP35-201ENST00000526425 ETNK1Q9HBU6 452 aa10.33□□□□□ -0.76
USP35-201ENST00000526425 FAM49BQ9NUQ9 324 aa10.33□□□□□ -0.76
USP35-201ENST00000526425 TMEM247A6NEH6 219 aa10.33□□□□□ -0.76
USP35-201ENST00000526425 M0QYV0 167 aa10.33□□□□□ -0.76
USP35-201ENST00000526425 INSRRP14616 1297 aa10.33□□□□□ -0.76
USP35-201ENST00000526425 KRT15P19012 456 aa10.33□□□□□ -0.76
USP35-201ENST00000526425 INHBCP55103 352 aa10.33□□□□□ -0.76
USP35-201ENST00000526425 C1orf220Q5T0J3 134 aa10.33□□□□□ -0.76
USP35-201ENST00000526425 TRIM67Q6ZTA4 783 aa10.33□□□□□ -0.76
USP35-201ENST00000526425 VSIG1Q86XK7 387 aa10.33□□□□□ -0.76
USP35-201ENST00000526425 RFX6Q8HWS3 928 aa10.33□□□□□ -0.76
USP35-201ENST00000526425 HELQQ8TDG4 1101 aa10.33□□□□□ -0.76
USP35-201ENST00000526425 SEMA4AQ9H3S1 761 aa10.33□□□□□ -0.76
USP35-201ENST00000526425 C17orf75Q9HAS0 396 aa10.33□□□□□ -0.76
USP35-201ENST00000526425 DMAP1Q9NPF5 467 aaPredicted RBP10.33□□□□□ -0.76
USP35-201ENST00000526425 NMRK2Q9NPI5 230 aa10.33□□□□□ -0.76
USP35-201ENST00000526425 CHST7Q9NS84 486 aa10.33□□□□□ -0.76
USP35-201ENST00000526425 WDR37Q9Y2I8 494 aa10.33□□□□□ -0.76
USP35-201ENST00000526425 A0A0A6YYK5 440 aaPredicted RBP10.33□□□□□ -0.76
USP35-201ENST00000526425 BTBD19C9JJ37 291 aa10.33□□□□□ -0.76
USP35-201ENST00000526425 ADCY3O60266 1144 aa10.33□□□□□ -0.76
USP35-201ENST00000526425 DNAJC8O75937 253 aaPredicted RBP10.33□□□□□ -0.76
USP35-201ENST00000526425 FARP2O94887 1054 aaPredicted RBP10.33□□□□□ -0.76
USP35-201ENST00000526425 SHBGP04278 402 aa10.33□□□□□ -0.76
USP35-201ENST00000526425 ANXA13P27216 316 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms