RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 TMEM240Q5SV17 173 aa5.24□□□□□ -1.57
CSDE1-210ENST00000525878 GALNT4Q8N4A0 578 aa5.24□□□□□ -1.57
CSDE1-210ENST00000525878 BRIX1Q8TDN6 353 aaKnown RBP5.24□□□□□ -1.57
CSDE1-210ENST00000525878 R3HDM4Q96D70 268 aa5.24□□□□□ -1.57
CSDE1-210ENST00000525878 DAZAP1Q96EP5 407 aaKnown RBP5.24□□□□□ -1.57
CSDE1-210ENST00000525878 LENG8Q96PV6 779 aaPredicted RBP5.24□□□□□ -1.57
CSDE1-210ENST00000525878 PUS7Q96PZ0 661 aaKnown RBP5.24□□□□□ -1.57
CSDE1-210ENST00000525878 SNX18Q96RF0 628 aa5.24□□□□□ -1.57
CSDE1-210ENST00000525878 CCND1P24385 295 aa5.23□□□□□ -1.57
CSDE1-210ENST00000525878 RABEP1Q15276 862 aa5.23□□□□□ -1.57
CSDE1-210ENST00000525878 Q4G0T1 1027 aa5.23□□□□□ -1.57
CSDE1-210ENST00000525878 RNF187Q5TA31 235 aaPredicted RBP5.23□□□□□ -1.57
CSDE1-210ENST00000525878 PXDC1Q5TGL8 231 aa5.23□□□□□ -1.57
CSDE1-210ENST00000525878 ABHD11Q8NFV4 315 aa5.23□□□□□ -1.57
CSDE1-210ENST00000525878 PIGOQ8TEQ8 1089 aa5.23□□□□□ -1.57
CSDE1-210ENST00000525878 MOGAT1Q96PD6 335 aa5.23□□□□□ -1.57
CSDE1-210ENST00000525878 AFG3L2Q9Y4W6 797 aa5.23□□□□□ -1.57
CSDE1-210ENST00000525878 SBNO2Q9Y2G9 1366 aa5.22□□□□□ -1.57
CSDE1-210ENST00000525878 INSIG1O15503 277 aa5.22□□□□□ -1.57
CSDE1-210ENST00000525878 CHRM5P08912 532 aaPredicted RBP5.22□□□□□ -1.57
CSDE1-210ENST00000525878 CYP2A6P11509 494 aaPredicted RBP5.22□□□□□ -1.57
CSDE1-210ENST00000525878 TPTEP56180 551 aa5.22□□□□□ -1.57
CSDE1-210ENST00000525878 EVA1CP58658 441 aa5.22□□□□□ -1.57
CSDE1-210ENST00000525878 TERB1Q8NA31 727 aa5.22□□□□□ -1.57
CSDE1-210ENST00000525878 COQ8BQ96D53 544 aa5.22□□□□□ -1.57
CSDE1-210ENST00000525878 SLC35A4Q96G79 324 aa5.22□□□□□ -1.57
CSDE1-210ENST00000525878 GTPBP4Q9BZE4 634 aaKnown RBP5.22□□□□□ -1.57
CSDE1-210ENST00000525878 XPR1Q9UBH6 696 aa5.22□□□□□ -1.57
CSDE1-210ENST00000525878 SHOC2Q9UQ13 582 aa5.22□□□□□ -1.57
CSDE1-210ENST00000525878 TCRBV5S1A1TA0A578 114 aa5.21□□□□□ -1.58
CSDE1-210ENST00000525878 H3BUI4 141 aa5.21□□□□□ -1.58
CSDE1-210ENST00000525878 hCG_1984214I3L0E3 225 aa5.21□□□□□ -1.58
CSDE1-210ENST00000525878 FCHO1O14526 889 aa5.21□□□□□ -1.58
CSDE1-210ENST00000525878 PDE8BO95263 885 aa5.21□□□□□ -1.58
CSDE1-210ENST00000525878 GRPP07492 148 aa5.21□□□□□ -1.58
CSDE1-210ENST00000525878 ATP5F1P24539 256 aaPredicted RBP5.21□□□□□ -1.58
CSDE1-210ENST00000525878 CCKBRP32239 447 aa5.21□□□□□ -1.58
CSDE1-210ENST00000525878 PDE6CP51160 858 aa5.21□□□□□ -1.58
CSDE1-210ENST00000525878 GPSM2P81274 684 aa5.21□□□□□ -1.58
CSDE1-210ENST00000525878 MYO1EQ12965 1108 aa5.21□□□□□ -1.58
CSDE1-210ENST00000525878 CYP1B1Q16678 543 aa5.21□□□□□ -1.58
CSDE1-210ENST00000525878 MEX3CQ5U5Q3 659 aaKnown RBP5.21□□□□□ -1.58
CSDE1-210ENST00000525878 MIS18BP1Q6P0N0 1132 aa5.21□□□□□ -1.58
CSDE1-210ENST00000525878 CATIPQ7Z7H3 387 aa5.21□□□□□ -1.58
CSDE1-210ENST00000525878 CNGA4Q8IV77 575 aa5.21□□□□□ -1.58
CSDE1-210ENST00000525878 PCSK9Q8NBP7 692 aaKnown RBP5.21□□□□□ -1.58
CSDE1-210ENST00000525878 XAGE5Q8WWM1 108 aa5.21□□□□□ -1.58
CSDE1-210ENST00000525878 MESP1Q9BRJ9 268 aa5.21□□□□□ -1.58
CSDE1-210ENST00000525878 BRIP1Q9BX63 1249 aa5.21□□□□□ -1.58
CSDE1-210ENST00000525878 SCAF8Q9UPN6 1271 aaKnown RBP5.21□□□□□ -1.58
CSDE1-210ENST00000525878 MRPS17Q9Y2R5 130 aaKnown RBP5.21□□□□□ -1.58
CSDE1-210ENST00000525878 MED16Q9Y2X0 877 aa5.21□□□□□ -1.58
CSDE1-210ENST00000525878 USP1O94782 785 aa5.2□□□□□ -1.58
CSDE1-210ENST00000525878 SNUPNO95149 360 aaKnown RBP5.2□□□□□ -1.58
CSDE1-210ENST00000525878 DLDP09622 509 aaKnown RBP5.2□□□□□ -1.58
CSDE1-210ENST00000525878 AKAP5P24588 427 aa5.2□□□□□ -1.58
CSDE1-210ENST00000525878 LRPAP1P30533 357 aa5.2□□□□□ -1.58
CSDE1-210ENST00000525878 RENBPP51606 427 aa5.2□□□□□ -1.58
CSDE1-210ENST00000525878 POLGP54098 1239 aaPredicted RBP5.2□□□□□ -1.58
CSDE1-210ENST00000525878 RAPGEF1Q13905 1077 aa5.2□□□□□ -1.58
CSDE1-210ENST00000525878 ZNF260Q3ZCT1 412 aa5.2□□□□□ -1.58
CSDE1-210ENST00000525878 CERKLQ49MI3 558 aaPredicted RBP5.2□□□□□ -1.58
CSDE1-210ENST00000525878 KLHL22Q53GT1 634 aa5.2□□□□□ -1.58
CSDE1-210ENST00000525878 RNASE12Q5GAN4 147 aaKnown RBP5.2□□□□□ -1.58
CSDE1-210ENST00000525878 ZNF813Q6ZN06 617 aa5.2□□□□□ -1.58
CSDE1-210ENST00000525878 SAMD14Q8IZD0 417 aaPredicted RBP5.2□□□□□ -1.58
CSDE1-210ENST00000525878 ZNF398Q8TD17 642 aa5.2□□□□□ -1.58
CSDE1-210ENST00000525878 MVB12AQ96EY5 273 aa5.2□□□□□ -1.58
CSDE1-210ENST00000525878 CDK5RAP3Q96JB5 506 aa5.2□□□□□ -1.58
CSDE1-210ENST00000525878 CXorf36Q9H7Y0 433 aa5.2□□□□□ -1.58
CSDE1-210ENST00000525878 KLHL13Q9P2N7 655 aa5.2□□□□□ -1.58
CSDE1-210ENST00000525878 PCDHA6Q9UN73 950 aa5.2□□□□□ -1.58
CSDE1-210ENST00000525878 SOCS2O14508 198 aa5.19□□□□□ -1.58
CSDE1-210ENST00000525878 FGBP02675 491 aa5.19□□□□□ -1.58
CSDE1-210ENST00000525878 PRKCBP05771 671 aa5.19□□□□□ -1.58
CSDE1-210ENST00000525878 CYP2C9P11712 490 aa5.19□□□□□ -1.58
CSDE1-210ENST00000525878 PLCD1P51178 756 aa5.19□□□□□ -1.58
CSDE1-210ENST00000525878 WNT3P56703 355 aa5.19□□□□□ -1.58
CSDE1-210ENST00000525878 HTRA4P83105 476 aaPredicted RBP5.19□□□□□ -1.58
CSDE1-210ENST00000525878 TWIST1Q15672 202 aa5.19□□□□□ -1.58
CSDE1-210ENST00000525878 ZIK1Q3SY52 487 aaPredicted RBP5.19□□□□□ -1.58
CSDE1-210ENST00000525878 KHDC1LQ5JSQ8 128 aa5.19□□□□□ -1.58
CSDE1-210ENST00000525878 L1TD1Q5T7N2 865 aaKnown RBP5.19□□□□□ -1.58
CSDE1-210ENST00000525878 ZNF280BQ86YH2 543 aa5.19□□□□□ -1.58
CSDE1-210ENST00000525878 ABRAQ8N0Z2 381 aa5.19□□□□□ -1.58
CSDE1-210ENST00000525878 CELF5Q8N6W0 485 aaKnown RBP5.19□□□□□ -1.58
CSDE1-210ENST00000525878 PRSS3P2Q8NHM4 247 aa5.19□□□□□ -1.58
CSDE1-210ENST00000525878 MRGPRX1Q96LB2 322 aa5.19□□□□□ -1.58
CSDE1-210ENST00000525878 FAM118BQ9BPY3 351 aa5.19□□□□□ -1.58
CSDE1-210ENST00000525878 ADGRE3Q9BY15 652 aa5.19□□□□□ -1.58
CSDE1-210ENST00000525878 TCF7L1Q9HCS4 588 aa5.19□□□□□ -1.58
CSDE1-210ENST00000525878 TRNAU1APQ9NX07 287 aaKnown RBP5.19□□□□□ -1.58
CSDE1-210ENST00000525878 UBE2Q2LH0YL09 131 aa5.18□□□□□ -1.58
CSDE1-210ENST00000525878 EXOC3O60645 756 aa5.18□□□□□ -1.58
CSDE1-210ENST00000525878 THP07101 528 aa5.18□□□□□ -1.58
CSDE1-210ENST00000525878 FPR3P25089 353 aa5.18□□□□□ -1.58
CSDE1-210ENST00000525878 IL1R2P27930 398 aa5.18□□□□□ -1.58
CSDE1-210ENST00000525878 SLC11A2P49281 568 aa5.18□□□□□ -1.58
CSDE1-210ENST00000525878 DGKEP52429 567 aa5.18□□□□□ -1.58
CSDE1-210ENST00000525878 UCP3P55916 312 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms