RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 ATP6V1B1P15313 513 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 ATF2P15336 505 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 HSPA13P48723 471 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 KCNQ4P56696 695 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 PPP4CP60510 307 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 DLG1Q12959 904 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 MESDQ14696 234 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 OASLQ15646 514 aaKnown RBP8.76□□□□□ -1.01
CSMD1-213ENST00000523488 NDUFA5Q16718 116 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 GRAMD1BQ3KR37 738 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 PLA2G4FQ68DD2 849 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 AADACL2Q6P093 401 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 TRIM50Q86XT4 487 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 PALB2Q86YC2 1186 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 DZIP1Q86YF9 867 aaKnown RBP8.76□□□□□ -1.01
CSMD1-213ENST00000523488 MARCH10Q8NA82 808 aaPredicted RBP8.76□□□□□ -1.01
CSMD1-213ENST00000523488 HM13Q8TCT9 377 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 SNX29Q8TEQ0 813 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 C9orf72Q96LT7 481 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 ZNF597Q96LX8 424 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 CFAP57Q96MR6 1250 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 PLVAPQ9BX97 442 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 PSMC3IPQ9P2W1 217 aaPredicted RBP8.76□□□□□ -1.01
CSMD1-213ENST00000523488 TRMT112Q9UI30 125 aaKnown RBP8.76□□□□□ -1.01
CSMD1-213ENST00000523488 PTBP2Q9UKA9 531 aaKnown RBP8.76□□□□□ -1.01
CSMD1-213ENST00000523488 ZSWIM8A7E2V4 1837 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 ZNF236Q9UL36 1845 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 TSPY2A6NKD2 308 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 ATMINO43313 823 aaPredicted RBP8.76□□□□□ -1.01
CSMD1-213ENST00000523488 PSTPIP1O43586 416 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 XRCC5P13010 732 aaKnown RBP8.76□□□□□ -1.01
CSMD1-213ENST00000523488 RRM1P23921 792 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 HALP42357 657 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 CSRP3P50461 194 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 CASP5P51878 434 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 WASHC5Q12768 1159 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 CCDC14Q49A88 953 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 TMEM53Q6P2H8 277 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 DCDC5Q6ZRR9 648 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 CAPN12Q6ZSI9 719 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 PATL1Q86TB9 770 aaKnown RBP8.76□□□□□ -1.01
CSMD1-213ENST00000523488 NKD2Q969F2 451 aaPredicted RBP8.76□□□□□ -1.01
CSMD1-213ENST00000523488 MTBPQ96DY7 904 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 PPP1R10Q96QC0 940 aaKnown RBP8.76□□□□□ -1.01
CSMD1-213ENST00000523488 THTPAQ9BU02 230 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 RTFDC1Q9BY42 306 aaPredicted RBP8.76□□□□□ -1.01
CSMD1-213ENST00000523488 FRMD8P1Q9BZ68 369 aaPredicted RBP8.76□□□□□ -1.01
CSMD1-213ENST00000523488 OSBPL6Q9BZF3 934 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 ACSS3Q9H6R3 686 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 BTG4Q9NY30 223 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 TCRBV5S1A1TA0A578 114 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 G3V3G9 751 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 TNFAIP8O95379 198 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 COMTP21964 271 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 DCKP27707 260 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 GNA11P29992 359 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 KCTD21Q4G0X4 260 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 DCAF8Q5TAQ9 597 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 POTEHQ6S545 545 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 COLGALT2Q8IYK4 626 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 DHX38Q92620 1227 aaKnown RBP8.76□□□□□ -1.01
CSMD1-213ENST00000523488 CLK4Q9HAZ1 481 aaKnown RBP8.76□□□□□ -1.01
CSMD1-213ENST00000523488 VPS45Q9NRW7 570 aa8.76□□□□□ -1.01
CSMD1-213ENST00000523488 HBS1LQ9Y450 684 aaKnown RBP8.76□□□□□ -1.01
CSMD1-213ENST00000523488 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.76□□□□□ -1.01
CSMD1-213ENST00000523488 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.75□□□□□ -1.01
CSMD1-213ENST00000523488 H3BRJ5 948 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 CALUO43852 315 aaPredicted RBP8.75□□□□□ -1.01
CSMD1-213ENST00000523488 NR2F2P24468 414 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 SERPINB6P35237 376 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 FMO5P49326 533 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 NAPAP54920 295 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 AQP4P55087 323 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 SNRPFP62306 86 aaKnown RBP8.75□□□□□ -1.01
CSMD1-213ENST00000523488 CCDC153Q494R4 210 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 SGO2Q562F6 1265 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 B3GNT9Q6UX72 402 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 MAMDC4Q6UXC1 1216 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 TIFABQ6ZNK6 161 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 CYS1Q717R9 158 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 PTF1AQ7RTS3 328 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 RTKN2Q8IZC4 609 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 LSMEM2Q8N112 164 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 ADCY4Q8NFM4 1077 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 FBXO27Q8NI29 283 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 TRIB2Q92519 343 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 ST6GALNAC4Q9H4F1 302 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 GNPTGQ9UJJ9 305 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 FUOMA2VDF0 154 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 USP1O94782 785 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 STK10O94804 968 aaKnown RBP8.75□□□□□ -1.01
CSMD1-213ENST00000523488 SPATA31C1P0DKV0 1188 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 PIK3CAP42336 1068 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 IRX4P78413 519 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 MINDY2Q8NBR6 621 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 HSPBAP1Q96EW2 488 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 NGLY1Q96IV0 654 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 COX4I2Q96KJ9 171 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 PCDHB18PQ96TA0 734 aa8.75□□□□□ -1.01
CSMD1-213ENST00000523488 CTRCQ99895 268 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms