RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 TRIM5Q9C035 493 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 PITHD1Q9GZP4 211 aaPredicted RBP4.38□□□□□ -1.71
SKP1-209ENST00000522552 DNAI2Q9GZS0 605 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 DUSP15Q9H1R2 295 aaPredicted RBP4.38□□□□□ -1.71
SKP1-209ENST00000522552 VPS33BQ9H267 617 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 VPS16Q9H269 839 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 MANSC1Q9H8J5 431 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 IL21RQ9HBE5 538 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 A1CFQ9NQ94 594 aaKnown RBP4.38□□□□□ -1.71
SKP1-209ENST00000522552 TBCCD1Q9NVR7 557 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 ADPRHL2Q9NX46 363 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 ZDHHC7Q9NXF8 308 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 TAS2R10Q9NYW0 307 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 COQ3Q9NZJ6 369 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 BTBD7Q9P203 1132 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 SH3BGRL2Q9UJC5 107 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 MOSPD1Q9UJG1 213 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 DTNAQ9Y4J8 743 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 LYVE1Q9Y5Y7 322 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 IKBKGQ9Y6K9 419 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 A0A1W2PQ09 198 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 SSU72P8A0A1W2PR75 194 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 TMEM82A0PJX8 343 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 A8MXE2 369 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 C1QTNF9BB2RNN3 333 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 TAF4O00268 1085 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 KLK10O43240 276 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 SEC24DO94855 1032 aaPredicted RBP4.37□□□□□ -1.71
SKP1-209ENST00000522552 MATN4O95460 622 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 SPATA31C1P0DKV0 1188 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 PCP11498 1178 aaKnown RBP4.37□□□□□ -1.71
SKP1-209ENST00000522552 ALADP13716 330 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 CPA1P15085 419 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 EEF1DP29692 281 aaKnown RBP4.37□□□□□ -1.71
SKP1-209ENST00000522552 GCH1P30793 250 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 CIITAP33076 1130 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 SLC14A1Q13336 389 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 SLC5A9Q2M3M2 681 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 DEPDC1Q5TB30 811 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 DCAF12L1Q5VU92 463 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 ANO7Q6IWH7 933 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 TAF2Q6P1X5 1199 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 FDX2Q6P4F2 183 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 C11orf88Q6PI97 169 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 INO80CQ6PI98 192 aaPredicted RBP4.37□□□□□ -1.71
SKP1-209ENST00000522552 CYP20A1Q6UW02 462 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 FAM180AQ6UWF9 173 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 SHISA2Q6UWI4 295 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 CCDC73Q6ZRK6 1079 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.37□□□□□ -1.71
SKP1-209ENST00000522552 Q6ZVL8 140 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.37□□□□□ -1.71
SKP1-209ENST00000522552 CD163Q86VB7 1156 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 MPP5Q8N3R9 675 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 PCSK9Q8NBP7 692 aaKnown RBP4.37□□□□□ -1.71
SKP1-209ENST00000522552 AGBL5Q8NDL9 886 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 CHST13Q8NET6 341 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 GPR150Q8NGU9 434 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 NFKBIDQ8NI38 313 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 ETNPPLQ8TBG4 499 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 PIWIL2Q8TC59 973 aaKnown RBP4.37□□□□□ -1.71
SKP1-209ENST00000522552 CLEC4DQ8WXI8 215 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 KRT35Q92764 455 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 EXOC4Q96A65 974 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 KIF1BPQ96EK5 621 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 MAP6Q96JE9 813 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 GOLGA2P5Q9HBQ8 144 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 UCKL1Q9NWZ5 548 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 COMMD8Q9NX08 183 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 ERVK13-1Q9NX77 482 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.37□□□□□ -1.71
SKP1-209ENST00000522552 ZC3H7BQ9UGR2 993 aaKnown RBP4.37□□□□□ -1.71
SKP1-209ENST00000522552 KCND3Q9UK17 655 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 RWDD3Q9Y3V2 267 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 PAXBP1Q9Y5B6 917 aa4.37□□□□□ -1.71
SKP1-209ENST00000522552 MYBBP1AQ9BQG0 1328 aaKnown RBP4.37□□□□□ -1.71
SKP1-209ENST00000522552 A0A0A6YYJ9 748 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 ARHGAP10A1A4S6 786 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 NPIPB15A6NHN6 443 aaPredicted RBP4.36□□□□□ -1.71
SKP1-209ENST00000522552 NFIBO00712 420 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 USP2O75604 605 aaPredicted RBP4.36□□□□□ -1.71
SKP1-209ENST00000522552 RASSF9O75901 435 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 PIAS2O75928 621 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 NTSR2O95665 410 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 AMY1AP04745 511 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 SNRNP70P08621 437 aaKnown RBP4.36□□□□□ -1.71
SKP1-209ENST00000522552 NFICP08651 508 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 GAP43P17677 238 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 BTF3P20290 206 aaKnown RBP4.36□□□□□ -1.71
SKP1-209ENST00000522552 LTKP29376 864 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 GRK5P34947 590 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 KRT2P35908 639 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 GARSP41250 739 aaKnown RBP4.36□□□□□ -1.71
SKP1-209ENST00000522552 RAC1P63000 192 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 NSUN2Q08J23 767 aaKnown RBP eCLIP4.36□□□□□ -1.71
SKP1-209ENST00000522552 MGAT5Q09328 741 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 COASYQ13057 564 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 HABP2Q14520 560 aaPredicted RBP4.36□□□□□ -1.71
SKP1-209ENST00000522552 WSCD2Q2TBF2 565 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 TCP11X2Q5H9J9 407 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms