RNA–Protein interactions for RNA: ENST00000522539.1

BRF2-204, Transcript of BRF2, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF2, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2-204ENST00000522539 LIMS2Q7Z4I7 341 aa13.21□□□□□ -0.29
BRF2-204ENST00000522539 C1orf127Q8N9H9 656 aa13.21□□□□□ -0.29
BRF2-204ENST00000522539 HVCN1Q96D96 273 aa13.21□□□□□ -0.29
BRF2-204ENST00000522539 CALML4Q96GE6 196 aa13.21□□□□□ -0.29
BRF2-204ENST00000522539 FUBP3Q96I24 572 aaKnown RBP eCLIP13.21□□□□□ -0.29
BRF2-204ENST00000522539 IKZF4Q9H2S9 585 aa13.21□□□□□ -0.29
BRF2-204ENST00000522539 LINC00597Q9H2U6 94 aa13.21□□□□□ -0.29
BRF2-204ENST00000522539 GDAP2Q9NXN4 497 aa13.21□□□□□ -0.29
BRF2-204ENST00000522539 DDX43Q9NXZ2 648 aaKnown RBP13.21□□□□□ -0.29
BRF2-204ENST00000522539 MMP17Q9ULZ9 603 aa13.21□□□□□ -0.29
BRF2-204ENST00000522539 ASCC3Q8N3C0 2202 aaKnown RBP13.2□□□□□ -0.3
BRF2-204ENST00000522539 C2orf78A6NCI8 922 aa13.2□□□□□ -0.3
BRF2-204ENST00000522539 TBCAO75347 108 aaKnown RBP13.2□□□□□ -0.3
BRF2-204ENST00000522539 TOP3BO95985 862 aaKnown RBP13.2□□□□□ -0.3
BRF2-204ENST00000522539 CKMP06732 381 aa13.2□□□□□ -0.3
BRF2-204ENST00000522539 PFKLP17858 780 aa13.2□□□□□ -0.3
BRF2-204ENST00000522539 PLCG1P19174 1290 aa13.2□□□□□ -0.3
BRF2-204ENST00000522539 SPINK2P20155 84 aa13.2□□□□□ -0.3
BRF2-204ENST00000522539 POLR2BP30876 1174 aaKnown RBP13.2□□□□□ -0.3
BRF2-204ENST00000522539 GBP1P32455 592 aa13.2□□□□□ -0.3
BRF2-204ENST00000522539 UBA7P41226 1012 aa13.2□□□□□ -0.3
BRF2-204ENST00000522539 MAGEA11P43364 429 aa13.2□□□□□ -0.3
BRF2-204ENST00000522539 DHX8Q14562 1220 aaKnown RBP13.2□□□□□ -0.3
BRF2-204ENST00000522539 POSTNQ15063 836 aa13.2□□□□□ -0.3
BRF2-204ENST00000522539 CRY1Q16526 586 aa13.2□□□□□ -0.3
BRF2-204ENST00000522539 CCDC142Q17RM4 750 aa13.2□□□□□ -0.3
BRF2-204ENST00000522539 SCARA3Q6AZY7 606 aa13.2□□□□□ -0.3
BRF2-204ENST00000522539 FAM171BQ6P995 826 aa13.2□□□□□ -0.3
BRF2-204ENST00000522539 OSTM1Q86WC4 334 aa13.2□□□□□ -0.3
BRF2-204ENST00000522539 HSCBQ8IWL3 235 aa13.2□□□□□ -0.3
BRF2-204ENST00000522539 LRRC52Q8N7C0 313 aa13.2□□□□□ -0.3
BRF2-204ENST00000522539 ARL14EPQ8N8R7 260 aaPredicted RBP13.2□□□□□ -0.3
BRF2-204ENST00000522539 MDGA1Q8NFP4 955 aa13.2□□□□□ -0.3
BRF2-204ENST00000522539 SH3RF2Q8TEC5 729 aa13.2□□□□□ -0.3
BRF2-204ENST00000522539 CEP295NLQ96MC4 621 aa13.2□□□□□ -0.3
BRF2-204ENST00000522539 SCNM1Q9BWG6 230 aa13.2□□□□□ -0.3
BRF2-204ENST00000522539 TPSD1Q9BZJ3 242 aa13.2□□□□□ -0.3
BRF2-204ENST00000522539 TRPC7Q9HCX4 862 aa13.2□□□□□ -0.3
BRF2-204ENST00000522539 GTF3C4Q9UKN8 822 aa13.2□□□□□ -0.3
BRF2-204ENST00000522539 INVSQ9Y283 1065 aa13.2□□□□□ -0.3
BRF2-204ENST00000522539 KIF3AQ9Y496 699 aa13.2□□□□□ -0.3
BRF2-204ENST00000522539 A0A0A0MRY4 1105 aa13.19□□□□□ -0.3
BRF2-204ENST00000522539 ANTXRLA6NF34 631 aa13.19□□□□□ -0.3
BRF2-204ENST00000522539 HUS1O60921 280 aa13.19□□□□□ -0.3
BRF2-204ENST00000522539 NFATC1O95644 943 aa13.19□□□□□ -0.3
BRF2-204ENST00000522539 KRT18P05783 430 aaKnown RBP13.19□□□□□ -0.3
BRF2-204ENST00000522539 HOXB3P14651 431 aaPredicted RBP13.19□□□□□ -0.3
BRF2-204ENST00000522539 HNRNPLP14866 589 aaKnown RBP eCLIP13.19□□□□□ -0.3
BRF2-204ENST00000522539 ACAT1P24752 427 aaKnown RBP13.19□□□□□ -0.3
BRF2-204ENST00000522539 LONP1P36776 959 aaKnown RBP13.19□□□□□ -0.3
BRF2-204ENST00000522539 MRPS21P82921 87 aaKnown RBP13.19□□□□□ -0.3
BRF2-204ENST00000522539 MYL7Q01449 175 aa13.19□□□□□ -0.3
BRF2-204ENST00000522539 PSMD2Q13200 908 aa13.19□□□□□ -0.3
BRF2-204ENST00000522539 COL9A2Q14055 689 aaPredicted RBP13.19□□□□□ -0.3
BRF2-204ENST00000522539 RABEP1Q15276 862 aa13.19□□□□□ -0.3
BRF2-204ENST00000522539 PEAR1Q5VY43 1037 aaPredicted RBP13.19□□□□□ -0.3
BRF2-204ENST00000522539 MCTP1Q6DN14 999 aa13.19□□□□□ -0.3
BRF2-204ENST00000522539 ANO7Q6IWH7 933 aa13.19□□□□□ -0.3
BRF2-204ENST00000522539 TMEM92Q6UXU6 159 aa13.19□□□□□ -0.3
BRF2-204ENST00000522539 CYP2U1Q7Z449 544 aa13.19□□□□□ -0.3
BRF2-204ENST00000522539 BRSK2Q8IWQ3 736 aa13.19□□□□□ -0.3
BRF2-204ENST00000522539 TOP6BLQ8N6T0 577 aa13.19□□□□□ -0.3
BRF2-204ENST00000522539 FSIP1Q8NA03 581 aa13.19□□□□□ -0.3
BRF2-204ENST00000522539 POMGNT1Q8WZA1 660 aa13.19□□□□□ -0.3
BRF2-204ENST00000522539 LARP4BQ92615 738 aaKnown RBP13.19□□□□□ -0.3
BRF2-204ENST00000522539 SPATA17Q96L03 361 aa13.19□□□□□ -0.3
BRF2-204ENST00000522539 AGAP1Q9UPQ3 857 aa13.19□□□□□ -0.3
BRF2-204ENST00000522539 THADAQ6YHU6 1953 aa13.19□□□□□ -0.3
BRF2-204ENST00000522539 AKAP13Q12802 2813 aa13.18□□□□□ -0.3
BRF2-204ENST00000522539 TNRC6BQ9UPQ9 1833 aaKnown RBP13.18□□□□□ -0.3
BRF2-204ENST00000522539 PCNX2A6NKB5 2137 aa13.18□□□□□ -0.3
BRF2-204ENST00000522539 HELZP42694 1942 aaKnown RBP13.18□□□□□ -0.3
BRF2-204ENST00000522539 SRRM3A6NNA2 597 aaPredicted RBP13.18□□□□□ -0.3
BRF2-204ENST00000522539 UPK3BL1B0FP48 263 aa13.18□□□□□ -0.3
BRF2-204ENST00000522539 UPK3BL2E5RIL1 263 aa13.18□□□□□ -0.3
BRF2-204ENST00000522539 TNFRSF10BO14763 440 aa13.18□□□□□ -0.3
BRF2-204ENST00000522539 OLFM2O95897 454 aa13.18□□□□□ -0.3
BRF2-204ENST00000522539 ITGB3P05106 788 aa13.18□□□□□ -0.3
BRF2-204ENST00000522539 HDCP19113 662 aa13.18□□□□□ -0.3
BRF2-204ENST00000522539 DDIT3P35638 169 aa13.18□□□□□ -0.3
BRF2-204ENST00000522539 EIF2DP41214 584 aaKnown RBP13.18□□□□□ -0.3
BRF2-204ENST00000522539 P2RY2P41231 377 aa13.18□□□□□ -0.3
BRF2-204ENST00000522539 LHX1P48742 406 aa13.18□□□□□ -0.3
BRF2-204ENST00000522539 PDE6CP51160 858 aa13.18□□□□□ -0.3
BRF2-204ENST00000522539 GRIN1Q05586 938 aa13.18□□□□□ -0.3
BRF2-204ENST00000522539 LMAN2Q12907 356 aa13.18□□□□□ -0.3
BRF2-204ENST00000522539 KCNB1Q14721 858 aa13.18□□□□□ -0.3
BRF2-204ENST00000522539 SOWAHAQ2M3V2 549 aa13.18□□□□□ -0.3
BRF2-204ENST00000522539 HSF5Q4G112 596 aaPredicted RBP13.18□□□□□ -0.3
BRF2-204ENST00000522539 C2orf27AQ580R0 203 aa13.18□□□□□ -0.3
BRF2-204ENST00000522539 SPDYCQ5MJ68 293 aa13.18□□□□□ -0.3
BRF2-204ENST00000522539 PIP4P1Q86T03 277 aa13.18□□□□□ -0.3
BRF2-204ENST00000522539 SPATA2LQ8IUW3 424 aaPredicted RBP13.18□□□□□ -0.3
BRF2-204ENST00000522539 ADGRG2Q8IZP9 1017 aa13.18□□□□□ -0.3
BRF2-204ENST00000522539 ZSWIM2Q8NEG5 633 aa13.18□□□□□ -0.3
BRF2-204ENST00000522539 FNBP1Q96RU3 617 aa13.18□□□□□ -0.3
BRF2-204ENST00000522539 TTLL2Q9BWV7 592 aa13.18□□□□□ -0.3
BRF2-204ENST00000522539 ZHX3Q9H4I2 956 aa13.18□□□□□ -0.3
BRF2-204ENST00000522539 SIX4Q9UIU6 781 aa13.18□□□□□ -0.3
BRF2-204ENST00000522539 ITGA11Q9UKX5 1188 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms