RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 ZNF699Q32M78 642 aa18.2■□□□□ 0.5
SQLE-205ENST00000521232 ZNF667Q5HYK9 610 aa18.2■□□□□ 0.5
SQLE-205ENST00000521232 C1orf220Q5T0J3 134 aa18.2■□□□□ 0.5
SQLE-205ENST00000521232 TXNDC8Q6A555 127 aa18.2■□□□□ 0.5
SQLE-205ENST00000521232 SV2AQ7L0J3 742 aa18.2■□□□□ 0.5
SQLE-205ENST00000521232 MAB21L3Q8N8X9 362 aa18.2■□□□□ 0.5
SQLE-205ENST00000521232 CSGALNACT1Q8TDX6 532 aa18.2■□□□□ 0.5
SQLE-205ENST00000521232 PIAS3Q9Y6X2 628 aa18.2■□□□□ 0.5
SQLE-205ENST00000521232 ANAPC1Q9H1A4 1944 aa18.19■□□□□ 0.5
SQLE-205ENST00000521232 A8MXQ7 604 aa18.19■□□□□ 0.5
SQLE-205ENST00000521232 TADA3O75528 432 aa18.19■□□□□ 0.5
SQLE-205ENST00000521232 AKAP3O75969 853 aa18.19■□□□□ 0.5
SQLE-205ENST00000521232 RPL13P26373 211 aaKnown RBP18.19■□□□□ 0.5
SQLE-205ENST00000521232 AVPR1AP37288 418 aa18.19■□□□□ 0.5
SQLE-205ENST00000521232 GRIK1P39086 918 aa18.19■□□□□ 0.5
SQLE-205ENST00000521232 PLCB2Q00722 1185 aa18.19■□□□□ 0.5
SQLE-205ENST00000521232 ENPEPQ07075 957 aa18.19■□□□□ 0.5
SQLE-205ENST00000521232 PNOCQ13519 176 aa18.19■□□□□ 0.5
SQLE-205ENST00000521232 ZCWPW2Q504Y3 356 aa18.19■□□□□ 0.5
SQLE-205ENST00000521232 MDH1BQ5I0G3 518 aa18.19■□□□□ 0.5
SQLE-205ENST00000521232 FRMD5Q7Z6J6 570 aa18.19■□□□□ 0.5
SQLE-205ENST00000521232 MAML2Q8IZL2 1156 aaPredicted RBP18.19■□□□□ 0.5
SQLE-205ENST00000521232 FAM3CQ92520 227 aa18.19■□□□□ 0.5
SQLE-205ENST00000521232 TAF4BQ92750 862 aa18.19■□□□□ 0.5
SQLE-205ENST00000521232 MSANTD3Q96H12 275 aa18.19■□□□□ 0.5
SQLE-205ENST00000521232 SMG9Q9H0W8 520 aaKnown RBP18.19■□□□□ 0.5
SQLE-205ENST00000521232 DPEP3Q9H4B8 488 aa18.19■□□□□ 0.5
SQLE-205ENST00000521232 C8orf33Q9H7E9 229 aaPredicted RBP18.19■□□□□ 0.5
SQLE-205ENST00000521232 TDP1Q9NUW8 608 aa18.19■□□□□ 0.5
SQLE-205ENST00000521232 CFAP54Q96N23 3096 aa18.19■□□□□ 0.5
SQLE-205ENST00000521232 FAM186AA6NE01 2351 aa18.18■□□□□ 0.5
SQLE-205ENST00000521232 TRIM66O15016 1216 aa18.18■□□□□ 0.5
SQLE-205ENST00000521232 SP9P0CG40 484 aa18.18■□□□□ 0.5
SQLE-205ENST00000521232 VAMP7P51809 220 aa18.18■□□□□ 0.5
SQLE-205ENST00000521232 CDH8P55286 799 aa18.18■□□□□ 0.5
SQLE-205ENST00000521232 ADAM9Q13443 819 aa18.18■□□□□ 0.5
SQLE-205ENST00000521232 ZNF268Q14587 947 aaPredicted RBP18.18■□□□□ 0.5
SQLE-205ENST00000521232 C1orf228Q6PIY5 440 aa18.18■□□□□ 0.5
SQLE-205ENST00000521232 INTS8Q75QN2 995 aaKnown RBP18.18■□□□□ 0.5
SQLE-205ENST00000521232 B3GALNT2Q8NCR0 500 aa18.18■□□□□ 0.5
SQLE-205ENST00000521232 USP13Q92995 863 aaPredicted RBP18.18■□□□□ 0.5
SQLE-205ENST00000521232 ZFYVE19Q96K21 471 aa18.18■□□□□ 0.5
SQLE-205ENST00000521232 C8orf48Q96LL4 319 aa18.18■□□□□ 0.5
SQLE-205ENST00000521232 SMYD3Q9H7B4 428 aa18.18■□□□□ 0.5
SQLE-205ENST00000521232 SPATA6Q9NWH7 488 aaPredicted RBP18.18■□□□□ 0.5
SQLE-205ENST00000521232 THG1LQ9NWX6 298 aaKnown RBP18.18■□□□□ 0.5
SQLE-205ENST00000521232 CCL26Q9Y258 94 aa18.18■□□□□ 0.5
SQLE-205ENST00000521232 PATJQ8NI35 1801 aa18.17■□□□□ 0.5
SQLE-205ENST00000521232 FANCMQ8IYD8 2048 aa18.17■□□□□ 0.5
SQLE-205ENST00000521232 GFRA3O60609 400 aa18.17■□□□□ 0.5
SQLE-205ENST00000521232 CCNE1P24864 410 aa18.17■□□□□ 0.5
SQLE-205ENST00000521232 PSMC2P35998 433 aaKnown RBP18.17■□□□□ 0.5
SQLE-205ENST00000521232 FAM160A1Q05DH4 1040 aa18.17■□□□□ 0.5
SQLE-205ENST00000521232 EDRF1Q3B7T1 1238 aa18.17■□□□□ 0.5
SQLE-205ENST00000521232 MAMSTRQ6ZN01 415 aa18.17■□□□□ 0.5
SQLE-205ENST00000521232 DENND5BQ6ZUT9 1274 aa18.17■□□□□ 0.5
SQLE-205ENST00000521232 SPATA20Q8TB22 786 aa18.17■□□□□ 0.5
SQLE-205ENST00000521232 TIGD1Q96MW7 591 aa18.17■□□□□ 0.5
SQLE-205ENST00000521232 GSDMAQ96QA5 445 aa18.17■□□□□ 0.5
SQLE-205ENST00000521232 B3GNT5Q9BYG0 378 aa18.17■□□□□ 0.5
SQLE-205ENST00000521232 SDCBP2Q9H190 292 aa18.17■□□□□ 0.5
SQLE-205ENST00000521232 KIF9Q9HAQ2 790 aa18.17■□□□□ 0.5
SQLE-205ENST00000521232 RMND1Q9NWS8 449 aa18.17■□□□□ 0.5
SQLE-205ENST00000521232 GTSE1Q9NYZ3 720 aa18.17■□□□□ 0.5
SQLE-205ENST00000521232 EHD2Q9NZN4 543 aa18.17■□□□□ 0.5
SQLE-205ENST00000521232 FBXO4Q9UKT5 387 aa18.17■□□□□ 0.5
SQLE-205ENST00000521232 NDRG2Q9UN36 371 aaKnown RBP18.17■□□□□ 0.5
SQLE-205ENST00000521232 KIF26AQ9ULI4 1882 aaPredicted RBP18.16■□□□□ 0.5
SQLE-205ENST00000521232 F8VP50 259 aa18.16■□□□□ 0.5
SQLE-205ENST00000521232 LAMTOR5O43504 91 aa18.16■□□□□ 0.5
SQLE-205ENST00000521232 ASS1P00966 412 aaKnown RBP18.16■□□□□ 0.5
SQLE-205ENST00000521232 P4HA1P13674 534 aa18.16■□□□□ 0.5
SQLE-205ENST00000521232 ANXA13P27216 316 aa18.16■□□□□ 0.5
SQLE-205ENST00000521232 KPNA1P52294 538 aaPredicted RBP18.16■□□□□ 0.5
SQLE-205ENST00000521232 NOP14P78316 857 aaKnown RBP18.16■□□□□ 0.5
SQLE-205ENST00000521232 ZNF528Q3MIS6 628 aa18.16■□□□□ 0.5
SQLE-205ENST00000521232 COBLL1Q53SF7 1204 aa18.16■□□□□ 0.5
SQLE-205ENST00000521232 ASCL5Q7RTU5 278 aa18.16■□□□□ 0.5
SQLE-205ENST00000521232 RALGPS2Q86X27 583 aaPredicted RBP18.16■□□□□ 0.5
SQLE-205ENST00000521232 FAM186BQ8IYM0 893 aa18.16■□□□□ 0.5
SQLE-205ENST00000521232 SMYD4Q8IYR2 804 aaPredicted RBP18.16■□□□□ 0.5
SQLE-205ENST00000521232 NKD2Q969F2 451 aaPredicted RBP18.16■□□□□ 0.5
SQLE-205ENST00000521232 ELMO3Q96BJ8 720 aa18.16■□□□□ 0.5
SQLE-205ENST00000521232 FAM83CQ9BQN1 747 aa18.16■□□□□ 0.5
SQLE-205ENST00000521232 TTLL2Q9BWV7 592 aa18.16■□□□□ 0.5
SQLE-205ENST00000521232 ELOVL4Q9GZR5 314 aa18.16■□□□□ 0.5
SQLE-205ENST00000521232 LMAN1LQ9HAT1 526 aa18.16■□□□□ 0.5
SQLE-205ENST00000521232 GKN1Q9NS71 199 aa18.16■□□□□ 0.5
SQLE-205ENST00000521232 GCNT4Q9P109 453 aa18.16■□□□□ 0.5
SQLE-205ENST00000521232 FRYLO94915 3013 aa18.16■□□□□ 0.5
SQLE-205ENST00000521232 PRR23AA6NEV1 266 aa18.15■□□□□ 0.5
SQLE-205ENST00000521232 SPECC1L-ADORA2AF8WAN1 911 aa18.15■□□□□ 0.5
SQLE-205ENST00000521232 HLA-DRAP01903 254 aa18.15■□□□□ 0.5
SQLE-205ENST00000521232 CHRNB1P11230 501 aa18.15■□□□□ 0.5
SQLE-205ENST00000521232 KRT13P13646 458 aa18.15■□□□□ 0.5
SQLE-205ENST00000521232 PRCPP42785 496 aa18.15■□□□□ 0.5
SQLE-205ENST00000521232 RAP1GAPP47736 663 aa18.15■□□□□ 0.5
SQLE-205ENST00000521232 SOX9P48436 509 aa18.15■□□□□ 0.5
SQLE-205ENST00000521232 CACNA2D1P54289 1103 aa18.15■□□□□ 0.5
SQLE-205ENST00000521232 USP46P62068 366 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms