RNA–Protein interactions for RNA: ENST00000521129.1

MCPH1-204, Transcript of microcephalin 1, humanhuman

TSL 2

Gene MCPH1, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-204ENST00000521129 EXTL3O43909 919 aa11.96□□□□□ -0.49
MCPH1-204ENST00000521129 EXOC3O60645 756 aa11.96□□□□□ -0.49
MCPH1-204ENST00000521129 RETP07949 1114 aa11.96□□□□□ -0.49
MCPH1-204ENST00000521129 HMGA1P17096 107 aaKnown RBP11.96□□□□□ -0.49
MCPH1-204ENST00000521129 DDX6P26196 483 aaKnown RBP eCLIP11.96□□□□□ -0.49
MCPH1-204ENST00000521129 STX17P56962 302 aa11.96□□□□□ -0.49
MCPH1-204ENST00000521129 LRRC63Q05C16 580 aa11.96□□□□□ -0.49
MCPH1-204ENST00000521129 PAK1Q13153 545 aa11.96□□□□□ -0.49
MCPH1-204ENST00000521129 NFE2Q16621 373 aaPredicted RBP11.96□□□□□ -0.49
MCPH1-204ENST00000521129 STX1AQ16623 288 aa11.96□□□□□ -0.49
MCPH1-204ENST00000521129 ITPRIPL2Q3MIP1 535 aa11.96□□□□□ -0.49
MCPH1-204ENST00000521129 ZCWPW2Q504Y3 356 aa11.96□□□□□ -0.49
MCPH1-204ENST00000521129 ANKRD40Q6AI12 368 aa11.96□□□□□ -0.49
MCPH1-204ENST00000521129 Q6ZS52 159 aa11.96□□□□□ -0.49
MCPH1-204ENST00000521129 TMEM150AQ86TG1 271 aa11.96□□□□□ -0.49
MCPH1-204ENST00000521129 GPIHBP1Q8IV16 184 aa11.96□□□□□ -0.49
MCPH1-204ENST00000521129 BRSK2Q8IWQ3 736 aa11.96□□□□□ -0.49
MCPH1-204ENST00000521129 CMTM8Q8IZV2 173 aa11.96□□□□□ -0.49
MCPH1-204ENST00000521129 XXYLT1Q8NBI6 393 aa11.96□□□□□ -0.49
MCPH1-204ENST00000521129 ZSWIM2Q8NEG5 633 aa11.96□□□□□ -0.49
MCPH1-204ENST00000521129 CXorf38Q8TB03 319 aa11.96□□□□□ -0.49
MCPH1-204ENST00000521129 GIPC2Q8TF65 315 aa11.96□□□□□ -0.49
MCPH1-204ENST00000521129 ZFYVE19Q96K21 471 aa11.96□□□□□ -0.49
MCPH1-204ENST00000521129 KIAA1586Q9HCI6 787 aa11.96□□□□□ -0.49
MCPH1-204ENST00000521129 ABCB6Q9NP58 842 aa11.96□□□□□ -0.49
MCPH1-204ENST00000521129 PARD6AQ9NPB6 346 aa11.96□□□□□ -0.49
MCPH1-204ENST00000521129 ANO10Q9NW15 660 aa11.96□□□□□ -0.49
MCPH1-204ENST00000521129 THG1LQ9NWX6 298 aaKnown RBP11.96□□□□□ -0.49
MCPH1-204ENST00000521129 ABI2Q9NYB9 513 aaPredicted RBP11.96□□□□□ -0.49
MCPH1-204ENST00000521129 PCDHB5Q9Y5E4 795 aa11.96□□□□□ -0.49
MCPH1-204ENST00000521129 SPAG17Q6Q759 2223 aa11.96□□□□□ -0.49
MCPH1-204ENST00000521129 CHD8Q9HCK8 2581 aa11.95□□□□□ -0.5
MCPH1-204ENST00000521129 RALGAPA1Q6GYQ0 2036 aa11.95□□□□□ -0.5
MCPH1-204ENST00000521129 SYCE3A1L190 88 aa11.95□□□□□ -0.5
MCPH1-204ENST00000521129 ZNF233A6NK53 670 aa11.95□□□□□ -0.5
MCPH1-204ENST00000521129 HRO43593 1189 aa11.95□□□□□ -0.5
MCPH1-204ENST00000521129 F11P03951 625 aa11.95□□□□□ -0.5
MCPH1-204ENST00000521129 NR2F2P24468 414 aa11.95□□□□□ -0.5
MCPH1-204ENST00000521129 RPL13P26373 211 aaKnown RBP11.95□□□□□ -0.5
MCPH1-204ENST00000521129 ATXN1P54253 815 aaKnown RBP11.95□□□□□ -0.5
MCPH1-204ENST00000521129 PMS1P54277 932 aaKnown RBP11.95□□□□□ -0.5
MCPH1-204ENST00000521129 WNT7BP56706 349 aa11.95□□□□□ -0.5
MCPH1-204ENST00000521129 TSPY1Q01534 308 aa11.95□□□□□ -0.5
MCPH1-204ENST00000521129 TYRO3Q06418 890 aa11.95□□□□□ -0.5
MCPH1-204ENST00000521129 TNK2Q07912 1038 aa11.95□□□□□ -0.5
MCPH1-204ENST00000521129 DMWDQ09019 674 aa11.95□□□□□ -0.5
MCPH1-204ENST00000521129 ADAM9Q13443 819 aa11.95□□□□□ -0.5
MCPH1-204ENST00000521129 PON2Q15165 354 aa11.95□□□□□ -0.5
MCPH1-204ENST00000521129 TAF12Q16514 161 aa11.95□□□□□ -0.5
MCPH1-204ENST00000521129 NFIL3Q16649 462 aa11.95□□□□□ -0.5
MCPH1-204ENST00000521129 EDRF1Q3B7T1 1238 aa11.95□□□□□ -0.5
MCPH1-204ENST00000521129 CEP135Q66GS9 1140 aa11.95□□□□□ -0.5
MCPH1-204ENST00000521129 LONP2Q86WA8 852 aa11.95□□□□□ -0.5
MCPH1-204ENST00000521129 SLC9A9Q8IVB4 645 aa11.95□□□□□ -0.5
MCPH1-204ENST00000521129 TMEM86AQ8N2M4 240 aa11.95□□□□□ -0.5
MCPH1-204ENST00000521129 PDCL2Q8N4E4 241 aa11.95□□□□□ -0.5
MCPH1-204ENST00000521129 LRRC52Q8N7C0 313 aa11.95□□□□□ -0.5
MCPH1-204ENST00000521129 C1orf127Q8N9H9 656 aa11.95□□□□□ -0.5
MCPH1-204ENST00000521129 RDH13Q8NBN7 331 aa11.95□□□□□ -0.5
MCPH1-204ENST00000521129 SPATA18Q8TC71 538 aa11.95□□□□□ -0.5
MCPH1-204ENST00000521129 CACTINQ8WUQ7 758 aaKnown RBP11.95□□□□□ -0.5
MCPH1-204ENST00000521129 FAM83CQ9BQN1 747 aa11.95□□□□□ -0.5
MCPH1-204ENST00000521129 ACBD6Q9BR61 282 aa11.95□□□□□ -0.5
MCPH1-204ENST00000521129 KIF9Q9HAQ2 790 aa11.95□□□□□ -0.5
MCPH1-204ENST00000521129 TMLHEQ9NVH6 421 aa11.95□□□□□ -0.5
MCPH1-204ENST00000521129 DMAC2Q9NW81 257 aa11.95□□□□□ -0.5
MCPH1-204ENST00000521129 GDAP2Q9NXN4 497 aa11.95□□□□□ -0.5
MCPH1-204ENST00000521129 RBAKQ9NYW8 714 aaPredicted RBP11.95□□□□□ -0.5
MCPH1-204ENST00000521129 ITGA11Q9UKX5 1188 aa11.95□□□□□ -0.5
MCPH1-204ENST00000521129 CDV3Q9UKY7 258 aaKnown RBP11.95□□□□□ -0.5
MCPH1-204ENST00000521129 USP18Q9UMW8 372 aa11.95□□□□□ -0.5
MCPH1-204ENST00000521129 CACNA1BQ00975 2339 aa11.95□□□□□ -0.5
MCPH1-204ENST00000521129 SDK1Q7Z5N4 2213 aa11.95□□□□□ -0.5
MCPH1-204ENST00000521129 CHURC1-FNTBB4DL54 471 aa11.94□□□□□ -0.5
MCPH1-204ENST00000521129 CETN3O15182 167 aa11.94□□□□□ -0.5
MCPH1-204ENST00000521129 ITGB3P05106 788 aa11.94□□□□□ -0.5
MCPH1-204ENST00000521129 CSH1P0DML2 217 aa11.94□□□□□ -0.5
MCPH1-204ENST00000521129 CSH2P0DML3 217 aa11.94□□□□□ -0.5
MCPH1-204ENST00000521129 POLR2BP30876 1174 aaKnown RBP11.94□□□□□ -0.5
MCPH1-204ENST00000521129 AVPR1AP37288 418 aa11.94□□□□□ -0.5
MCPH1-204ENST00000521129 FNTBP49356 437 aa11.94□□□□□ -0.5
MCPH1-204ENST00000521129 CDR1P51861 262 aa11.94□□□□□ -0.5
MCPH1-204ENST00000521129 TFAMQ00059 246 aaKnown RBP11.94□□□□□ -0.5
MCPH1-204ENST00000521129 FKBP3Q00688 224 aaKnown RBP11.94□□□□□ -0.5
MCPH1-204ENST00000521129 SIM2Q14190 667 aaPredicted RBP11.94□□□□□ -0.5
MCPH1-204ENST00000521129 ZNF268Q14587 947 aaPredicted RBP11.94□□□□□ -0.5
MCPH1-204ENST00000521129 SNRNP35Q16560 246 aaKnown RBP11.94□□□□□ -0.5
MCPH1-204ENST00000521129 ZSCAN23Q3MJ62 389 aa11.94□□□□□ -0.5
MCPH1-204ENST00000521129 PRR23BQ6ZRT6 265 aa11.94□□□□□ -0.5
MCPH1-204ENST00000521129 CBWD2Q8IUF1 395 aa11.94□□□□□ -0.5
MCPH1-204ENST00000521129 TTC8Q8TAM2 541 aa11.94□□□□□ -0.5
MCPH1-204ENST00000521129 USP13Q92995 863 aaPredicted RBP11.94□□□□□ -0.5
MCPH1-204ENST00000521129 TRMT2BQ96GJ1 504 aaKnown RBP11.94□□□□□ -0.5
MCPH1-204ENST00000521129 PKMYT1Q99640 499 aa11.94□□□□□ -0.5
MCPH1-204ENST00000521129 RTKNQ9BST9 563 aa11.94□□□□□ -0.5
MCPH1-204ENST00000521129 SMG9Q9H0W8 520 aaKnown RBP11.94□□□□□ -0.5
MCPH1-204ENST00000521129 GKN1Q9NS71 199 aa11.94□□□□□ -0.5
MCPH1-204ENST00000521129 TDP1Q9NUW8 608 aa11.94□□□□□ -0.5
MCPH1-204ENST00000521129 C2orf42Q9NWW7 574 aa11.94□□□□□ -0.5
MCPH1-204ENST00000521129 RWDD2AQ9UIY3 292 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms