RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-208	ENST00000520580	NGEF	Q8N5V2	710 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	ANKRD53	Q8N9V6	530 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	NSUN7	Q8NE18	718 aa	Known RBP	4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	ZMIZ2	Q8NF64	920 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	MCRS1	Q96EZ8	462 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	RBM17	Q96I25	401 aa	Known RBP	4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	APOPT1	Q96IL0	206 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	RPL10L	Q96L21	214 aa	Known RBP	4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	TTC14	Q96N46	770 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	CLIC6	Q96NY7	704 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	MED15	Q96RN5	788 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	NDC1	Q9BTX1	674 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	MXD3	Q9BW11	206 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	FTO	Q9C0B1	505 aa	Known RBP eCLIP	4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	TWSG1	Q9GZX9	223 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	KCNH6	Q9H252	994 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	PRDM13	Q9H4Q3	707 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	IL21R	Q9HBE5	538 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	EIF2B3	Q9NR50	452 aa	Known RBP	4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	PIAS3	Q9Y6X2	628 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	PNMA6E	A0A0J9YXQ4	647 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580		E9PLN8	166 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	KLK10	O43240	276 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	TEX33	O43247	280 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	MTSS1	O43312	755 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	PIAS2	O75928	621 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	NTSR2	O95665	410 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	APOA4	P06727	396 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	CYP21A2	P08686	494 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	RAC2	P15153	192 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	UBA7	P41226	1012 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	CUL4A	Q13619	759 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	BECN1	Q14457	450 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	EIF4H	Q15056	248 aa	Known RBP	4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	NPY5R	Q15761	445 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	TRIM71	Q2Q1W2	868 aa	Known RBP	4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	AMOT	Q4VCS5	1084 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	SLC30A6	Q6NXT4	461 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	BBS12	Q6ZW61	710 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	CNTROB	Q8N137	903 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	LILRA2	Q8N149	483 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	GALNT4	Q8N4A0	578 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	CCDC191	Q8NCU4	936 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	HMGB4	Q8WW32	186 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	ASB2	Q96Q27	587 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	GPR20	Q99678	358 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	VKORC1	Q9BQB6	163 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	GORASP1	Q9BQQ3	440 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	KATNBL1	Q9H079	304 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	SLC25A18	Q9H1K4	315 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	JKAMP	Q9P055	326 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	RPS6KA6	Q9UK32	745 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	PNPLA7	Q6ZV29	1317 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	CXorf49	A8MYA2	514 aa	Predicted RBP	4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	KIAA0355	O15063	1070 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	RGS10	O43665	173 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	TAF5L	O75529	589 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	RPP40	O75818	363 aa	Known RBP	4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	SASH1	O94885	1247 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	HAUS5	O94927	633 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	PEPD	P12955	493 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	POLD1	P28340	1107 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	MLH1	P40692	756 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	MRE11	P49959	708 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	SNX16	P57768	344 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	RPP30	P78346	268 aa	Known RBP	4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	DCTN2	Q13561	401 aa	Known RBP	4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	BOP1	Q14137	746 aa	Known RBP	4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	PCOLCE	Q15113	449 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	ANKRD1	Q15327	319 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	P3H1	Q32P28	736 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	TTC22	Q5TAA0	569 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	MANEAL	Q5VSG8	457 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	ANKS6	Q68DC2	871 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	KRTAP5-3	Q6L8H2	238 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	USP17L6P	Q6QN14	398 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	SLC30A10	Q6XR72	485 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	TMTC3	Q6ZXV5	915 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	XYLT1	Q86Y38	959 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	DNER	Q8NFT8	737 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	SMCR8	Q8TEV9	937 aa	Predicted RBP	4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	CREB3L4	Q8TEY5	395 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	CPT1B	Q92523	772 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	GFM2	Q969S9	779 aa	Known RBP	4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	MPHOSPH8	Q99549	860 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	EPC1	Q9H2F5	836 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	G6PC2	Q9NQR9	355 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	PLSCR4	Q9NRQ2	329 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	ZSCAN32	Q9NX65	697 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	DKK4	Q9UBT3	224 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	STK17A	Q9UEE5	414 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	MRPS17	Q9Y2R5	130 aa	Known RBP	4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	YBX2	Q9Y2T7	364 aa	Known RBP	4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	PAXBP1	Q9Y5B6	917 aa		4.05	□□□□□ -1.76
SREK1-208	ENST00000520580	KNG1	P01042	644 aa		4.04	□□□□□ -1.76
SREK1-208	ENST00000520580	ALAD	P13716	330 aa		4.04	□□□□□ -1.76
SREK1-208	ENST00000520580	ACSL1	P33121	698 aa		4.04	□□□□□ -1.76
SREK1-208	ENST00000520580	GDNF	P39905	211 aa		4.04	□□□□□ -1.76
SREK1-208	ENST00000520580	RGS2	P41220	211 aa		4.04	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms