RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 RBM41Q96IZ5 413 aaKnown RBP9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 MAGEB18Q96M61 343 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 CFAP57Q96MR6 1250 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 ELAC2Q9BQ52 826 aaKnown RBP9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 C17orf80Q9BSJ5 609 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 SEMA4AQ9H3S1 761 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 PCIF1Q9H4Z3 704 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 CXorf56Q9H5V9 222 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 AGO4Q9HCK5 861 aaKnown RBP9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 CD248Q9HCU0 757 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 BATF3Q9NR55 127 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 KLHL14Q9P2G3 628 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 GTF2IRD1Q9UHL9 959 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 ANAPC7Q9UJX3 599 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 ANAPC5Q9UJX4 755 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 TPX2Q9ULW0 747 aaKnown RBP9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 NR2E1Q9Y466 385 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 GSTTP1A0A1W2PQM5 241 aa9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 TMEM120BA0PK00 339 aa9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 LINC01553A4QN01 128 aa9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 GPR37O15354 613 aa9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 HNRNPCL1O60812 293 aaKnown RBP9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 LUC7L3O95232 432 aaKnown RBP9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 TTC4O95801 387 aa9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 OAS1P00973 400 aaKnown RBP9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 CTSHP09668 335 aa9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 ARP10275 920 aa9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 CHRNB2P17787 502 aa9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 ALDH3A1P30838 453 aa9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 GBP2P32456 591 aaPredicted RBP9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 ADCY8P40145 1251 aa9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 THPOP40225 353 aa9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 IFNAR2P48551 515 aa9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 MARCKSL1P49006 195 aa9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 IKBKEQ14164 716 aa9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 CCDC62Q6P9F0 684 aa9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.1□□□□□ -0.953e-7■□□□□ 9.8
CTNNA1-223ENST00000520520 PALB2Q86YC2 1186 aa9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 KSR1Q8IVT5 923 aa9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 GPD1LQ8N335 351 aa9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 GPATCH11Q8N954 259 aa9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 CKAP2Q8WWK9 683 aa9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 PSPC1Q8WXF1 523 aaKnown RBP9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 ATP6V0A1Q93050 837 aa9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 ZDHHC16Q969W1 377 aa9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 VCPIP1Q96JH7 1222 aa9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 TGS1Q96RS0 853 aaKnown RBP9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 RAD9AQ99638 391 aa9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 CBWD1Q9BRT8 395 aa9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 ADAM33Q9BZ11 813 aa9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 ADAM7Q9H2U9 754 aa9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 UBE2ZQ9H832 354 aaPredicted RBP9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 RXFP1Q9HBX9 757 aa9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 NOD2Q9HC29 1040 aa9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 KCNK9Q9NPC2 374 aa9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 CD320Q9NPF0 282 aa9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 KMT5AQ9NQR1 393 aa9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 RAB20Q9NX57 234 aa9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 NOP53Q9NZM5 478 aaKnown RBP9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 TBX20Q9UMR3 447 aa9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 SMG5Q9UPR3 1016 aaKnown RBP9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 UBIAD1Q9Y5Z9 338 aa9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 BDP1A6H8Y1 2624 aa9.1□□□□□ -0.95
CTNNA1-223ENST00000520520 KIAA1217Q5T5P2 1943 aa9.09□□□□□ -0.95
CTNNA1-223ENST00000520520 TCP11X1B4DZS4 312 aa9.09□□□□□ -0.95
CTNNA1-223ENST00000520520 H3BQ06 376 aaPredicted RBP9.09□□□□□ -0.95
CTNNA1-223ENST00000520520 DDX39AO00148 427 aaKnown RBP9.09□□□□□ -0.95
CTNNA1-223ENST00000520520 CLDN3O15551 220 aa9.09□□□□□ -0.95
CTNNA1-223ENST00000520520 DCTN3O75935 186 aa9.09□□□□□ -0.95
CTNNA1-223ENST00000520520 PROSCO94903 275 aa9.09□□□□□ -0.95
CTNNA1-223ENST00000520520 GJB5O95377 273 aa9.09□□□□□ -0.95
CTNNA1-223ENST00000520520 GJB6O95452 261 aa9.09□□□□□ -0.95
CTNNA1-223ENST00000520520 ACSL3O95573 720 aa9.09□□□□□ -0.95
CTNNA1-223ENST00000520520 NR3C2P08235 984 aa9.09□□□□□ -0.95
CTNNA1-223ENST00000520520 BRAFP15056 766 aa9.09□□□□□ -0.95
CTNNA1-223ENST00000520520 IL9P15248 144 aa9.09□□□□□ -0.95
CTNNA1-223ENST00000520520 NQO1P15559 274 aaKnown RBP9.09□□□□□ -0.95
CTNNA1-223ENST00000520520 POU3F3P20264 500 aaPredicted RBP9.09□□□□□ -0.95
CTNNA1-223ENST00000520520 CCND1P24385 295 aa9.09□□□□□ -0.95
CTNNA1-223ENST00000520520 TBXAS1P24557 533 aaPredicted RBP9.09□□□□□ -0.95
CTNNA1-223ENST00000520520 SLCO1A2P46721 670 aa9.09□□□□□ -0.95
CTNNA1-223ENST00000520520 RASSF2P50749 326 aa9.09□□□□□ -0.95
CTNNA1-223ENST00000520520 SLC18A1P54219 525 aa9.09□□□□□ -0.95
CTNNA1-223ENST00000520520 PEX3P56589 373 aa9.09□□□□□ -0.95
CTNNA1-223ENST00000520520 SLC8A3P57103 927 aa9.09□□□□□ -0.95
CTNNA1-223ENST00000520520 COPS2P61201 443 aa9.09□□□□□ -0.95
CTNNA1-223ENST00000520520 DLG4P78352 724 aa9.09□□□□□ -0.95
CTNNA1-223ENST00000520520 IFI35P80217 286 aaPredicted RBP9.09□□□□□ -0.95
CTNNA1-223ENST00000520520 MCL1Q07820 350 aa9.09□□□□□ -0.95
CTNNA1-223ENST00000520520 CYP24A1Q07973 514 aa9.09□□□□□ -0.95
CTNNA1-223ENST00000520520 SIX1Q15475 284 aaPredicted RBP9.09□□□□□ -0.95
CTNNA1-223ENST00000520520 CCNG2Q16589 344 aa9.09□□□□□ -0.95
CTNNA1-223ENST00000520520 XKR9Q5GH70 373 aa9.09□□□□□ -0.95
CTNNA1-223ENST00000520520 FAM102BQ5T8I3 360 aa9.09□□□□□ -0.95
CTNNA1-223ENST00000520520 RNF43Q68DV7 783 aa9.09□□□□□ -0.95
CTNNA1-223ENST00000520520 RHBDF2Q6PJF5 856 aa9.09□□□□□ -0.95
CTNNA1-223ENST00000520520 NLRX1Q86UT6 975 aa9.09□□□□□ -0.95
CTNNA1-223ENST00000520520 SLC47A2Q86VL8 602 aa9.09□□□□□ -0.95
CTNNA1-223ENST00000520520 KATNAL2Q8IYT4 538 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms