RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 Q96MF0 132 aa4□□□□□ -1.77
HMGB1P41-201ENST00000520234 TBCBQ99426 244 aa4□□□□□ -1.77
HMGB1P41-201ENST00000520234 TPSD1Q9BZJ3 242 aa4□□□□□ -1.77
HMGB1P41-201ENST00000520234 STARD7Q9NQZ5 370 aa4□□□□□ -1.77
HMGB1P41-201ENST00000520234 SYBUQ9NX95 663 aa4□□□□□ -1.77
HMGB1P41-201ENST00000520234 PHTF1Q9UMS5 762 aa4□□□□□ -1.77
HMGB1P41-201ENST00000520234 CORO2BQ9UQ03 480 aa4□□□□□ -1.77
HMGB1P41-201ENST00000520234 MROH2BQ7Z745 1585 aa4□□□□□ -1.77
HMGB1P41-201ENST00000520234 TMEM233B4DJY2 109 aa3.99□□□□□ -1.77
HMGB1P41-201ENST00000520234 YY2O15391 372 aa3.99□□□□□ -1.77
HMGB1P41-201ENST00000520234 MPPED1O15442 326 aa3.99□□□□□ -1.77
HMGB1P41-201ENST00000520234 THAP12O43422 761 aa3.99□□□□□ -1.77
HMGB1P41-201ENST00000520234 RASSF9O75901 435 aa3.99□□□□□ -1.77
HMGB1P41-201ENST00000520234 RHOBTB3O94955 611 aa3.99□□□□□ -1.77
HMGB1P41-201ENST00000520234 MT-ND5P03915 603 aa3.99□□□□□ -1.77
HMGB1P41-201ENST00000520234 ANXA2P07355 339 aaKnown RBP3.99□□□□□ -1.77
HMGB1P41-201ENST00000520234 PARP1P09874 1014 aaKnown RBP3.99□□□□□ -1.77
HMGB1P41-201ENST00000520234 IFIT2P09913 472 aaKnown RBP3.99□□□□□ -1.77
HMGB1P41-201ENST00000520234 TXNP10599 105 aaKnown RBP3.99□□□□□ -1.77
HMGB1P41-201ENST00000520234 PPP3CBP16298 524 aa3.99□□□□□ -1.77
HMGB1P41-201ENST00000520234 FOLR3P41439 243 aa3.99□□□□□ -1.77
HMGB1P41-201ENST00000520234 PRIM2P49643 509 aa3.99□□□□□ -1.77
HMGB1P41-201ENST00000520234 MRPS21P82921 87 aaKnown RBP3.99□□□□□ -1.77
HMGB1P41-201ENST00000520234 MYO1EQ12965 1108 aa3.99□□□□□ -1.77
HMGB1P41-201ENST00000520234 MPP3Q13368 585 aa3.99□□□□□ -1.77
HMGB1P41-201ENST00000520234 PTPRRQ15256 657 aa3.99□□□□□ -1.77
HMGB1P41-201ENST00000520234 IL31Q6EBC2 164 aa3.99□□□□□ -1.77
HMGB1P41-201ENST00000520234 LAIR1Q6GTX8 287 aa3.99□□□□□ -1.77
HMGB1P41-201ENST00000520234 PCSK4Q6UW60 755 aa3.99□□□□□ -1.77
HMGB1P41-201ENST00000520234 Q6YL49 198 aa3.99□□□□□ -1.77
HMGB1P41-201ENST00000520234 Q6ZNX1 250 aa3.99□□□□□ -1.77
HMGB1P41-201ENST00000520234 UNC13DQ70J99 1090 aa3.99□□□□□ -1.77
HMGB1P41-201ENST00000520234 RNF44Q7L0R7 432 aa3.99□□□□□ -1.77
HMGB1P41-201ENST00000520234 DTX2Q86UW9 622 aa3.99□□□□□ -1.77
HMGB1P41-201ENST00000520234 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.99□□□□□ -1.77
HMGB1P41-201ENST00000520234 ATP11CQ8NB49 1132 aa3.99□□□□□ -1.77
HMGB1P41-201ENST00000520234 SMCR8Q8TEV9 937 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P41-201ENST00000520234 RAPGEF4Q8WZA2 1011 aa3.99□□□□□ -1.77
HMGB1P41-201ENST00000520234 LPIN2Q92539 896 aa3.99□□□□□ -1.77
HMGB1P41-201ENST00000520234 CAVIN3Q969G5 261 aa3.99□□□□□ -1.77
HMGB1P41-201ENST00000520234 MYD88Q99836 296 aa3.99□□□□□ -1.77
HMGB1P41-201ENST00000520234 ALG8Q9BVK2 526 aa3.99□□□□□ -1.77
HMGB1P41-201ENST00000520234 STK31Q9BXU1 1019 aa3.99□□□□□ -1.77
HMGB1P41-201ENST00000520234 ACTRT3Q9BYD9 372 aa3.99□□□□□ -1.77
HMGB1P41-201ENST00000520234 CHST8Q9H2A9 424 aa3.99□□□□□ -1.77
HMGB1P41-201ENST00000520234 TOR3AQ9H497 397 aa3.99□□□□□ -1.77
HMGB1P41-201ENST00000520234 NDRG4Q9ULP0 352 aaKnown RBP3.99□□□□□ -1.77
HMGB1P41-201ENST00000520234 DMRT1Q9Y5R6 373 aa3.99□□□□□ -1.77
HMGB1P41-201ENST00000520234 BAZ1AQ9NRL2 1556 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 GRID2IPA4D2P6 1211 aa3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 CCDC151A5D8V7 595 aa3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 POM121BA6NF01 834 aa3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 RASA4BC9J798 803 aa3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 F8W8V4 182 aa3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 KPNA5O15131 536 aa3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 RASA4O43374 803 aa3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 TLR5O60602 858 aa3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 IL1R1P14778 569 aa3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 KCNA3P22001 575 aa3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 IL1R2P27930 398 aa3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 STT3AP46977 705 aa3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 CARSP49589 748 aaKnown RBP3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 ALDH5A1P51649 535 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 NEK3P51956 506 aa3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 SEC24CP53992 1094 aa3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 HTRA4P83105 476 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 ARHGEF7Q14155 803 aa3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 SLC29A2Q14542 456 aa3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 LONRF1Q17RB8 773 aa3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 ARHGAP40Q5TG30 622 aa3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 VPS53Q5VIR6 699 aa3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 KIAA0895LQ68EN5 471 aa3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 RGS7BPQ6MZT1 257 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 Q6ZPA2 131 aa3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 BEND5Q7L4P6 421 aa3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 ZNF627Q7L945 461 aa3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 VRK3Q8IV63 474 aa3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 SLC15A3Q8IY34 581 aa3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 TOR1AIP2Q8NFQ8 470 aa3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 BPIFB1Q8TDL5 484 aa3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 BRI3BPQ8WY22 251 aa3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 IQCDQ96DY2 449 aa3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 FBXL20Q96IG2 436 aa3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 CCDC138Q96M89 665 aa3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 ELAC2Q9BQ52 826 aaKnown RBP3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 FAM83DQ9H4H8 585 aa3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 KLC4Q9NSK0 619 aa3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 TRMT13Q9NUP7 481 aaKnown RBP3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 ZNF212Q9UDV6 495 aa3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 ITGB1BP2Q9UKP3 347 aa3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 PACSIN3Q9UKS6 424 aa3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 HDAC9Q9UKV0 1011 aa3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 EPN1Q9Y6I3 576 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P41-201ENST00000520234 CLSPNQ9HAW4 1339 aa3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 AQP7P3A6NL99 342 aa3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 CLCA1A8K7I4 914 aa3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 AREL1O15033 823 aa3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 FOXN1O15353 648 aa3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 SLC16A3O15427 465 aaKnown RBP3.97□□□□□ -1.77
HMGB1P41-201ENST00000520234 ORC4O43929 436 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms