RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 TPSD1Q9BZJ3 242 aa4.48□□□□□ -1.69
VPS13B-207ENST00000518569 FAM83DQ9H4H8 585 aa4.48□□□□□ -1.69
VPS13B-207ENST00000518569 HS3ST3A1Q9Y663 406 aa4.48□□□□□ -1.69
VPS13B-207ENST00000518569 A0A1W2PPC4 97 aa4.47□□□□□ -1.69
VPS13B-207ENST00000518569 CLCA1A8K7I4 914 aa4.47□□□□□ -1.69
VPS13B-207ENST00000518569 YY2O15391 372 aa4.47□□□□□ -1.69
VPS13B-207ENST00000518569 THAP12O43422 761 aa4.47□□□□□ -1.69
VPS13B-207ENST00000518569 SLPIP03973 132 aa4.47□□□□□ -1.69
VPS13B-207ENST00000518569 MYL3P08590 195 aa4.47□□□□□ -1.69
VPS13B-207ENST00000518569 ACVR2AP27037 513 aa4.47□□□□□ -1.69
VPS13B-207ENST00000518569 MPLP40238 635 aa4.47□□□□□ -1.69
VPS13B-207ENST00000518569 SEC24CP53992 1094 aa4.47□□□□□ -1.69
VPS13B-207ENST00000518569 BTKQ06187 659 aa4.47□□□□□ -1.69
VPS13B-207ENST00000518569 MPP3Q13368 585 aa4.47□□□□□ -1.69
VPS13B-207ENST00000518569 ARHGEF7Q14155 803 aa4.47□□□□□ -1.69
VPS13B-207ENST00000518569 SLC29A2Q14542 456 aa4.47□□□□□ -1.69
VPS13B-207ENST00000518569 NPY5RQ15761 445 aa4.47□□□□□ -1.69
VPS13B-207ENST00000518569 ZIK1Q3SY52 487 aaPredicted RBP4.47□□□□□ -1.69
VPS13B-207ENST00000518569 TEDDM1Q5T9Z0 273 aa4.47□□□□□ -1.69
VPS13B-207ENST00000518569 ARHGAP40Q5TG30 622 aa4.47□□□□□ -1.69
VPS13B-207ENST00000518569 CATSPERGQ6ZRH7 1159 aa4.47□□□□□ -1.69
VPS13B-207ENST00000518569 RNF44Q7L0R7 432 aa4.47□□□□□ -1.69
VPS13B-207ENST00000518569 BEND5Q7L4P6 421 aa4.47□□□□□ -1.69
VPS13B-207ENST00000518569 ZNF627Q7L945 461 aa4.47□□□□□ -1.69
VPS13B-207ENST00000518569 ZNF280BQ86YH2 543 aa4.47□□□□□ -1.69
VPS13B-207ENST00000518569 VRK3Q8IV63 474 aa4.47□□□□□ -1.69
VPS13B-207ENST00000518569 SLC15A3Q8IY34 581 aa4.47□□□□□ -1.69
VPS13B-207ENST00000518569 FAM186BQ8IYM0 893 aa4.47□□□□□ -1.69
VPS13B-207ENST00000518569 OR2C3Q8N628 320 aa4.47□□□□□ -1.69
VPS13B-207ENST00000518569 MYCBPAPQ8TBZ2 947 aa4.47□□□□□ -1.69
VPS13B-207ENST00000518569 BPIFB1Q8TDL5 484 aa4.47□□□□□ -1.69
VPS13B-207ENST00000518569 PARD3BQ8TEW8 1205 aa4.47□□□□□ -1.69
VPS13B-207ENST00000518569 NEU4Q8WWR8 484 aaPredicted RBP4.47□□□□□ -1.69
VPS13B-207ENST00000518569 CAVIN3Q969G5 261 aa4.47□□□□□ -1.69
VPS13B-207ENST00000518569 IQCDQ96DY2 449 aa4.47□□□□□ -1.69
VPS13B-207ENST00000518569 CCDC138Q96M89 665 aa4.47□□□□□ -1.69
VPS13B-207ENST00000518569 EIF2AQ9BY44 585 aaKnown RBP4.47□□□□□ -1.69
VPS13B-207ENST00000518569 ACTRT3Q9BYD9 372 aa4.47□□□□□ -1.69
VPS13B-207ENST00000518569 TOR3AQ9H497 397 aa4.47□□□□□ -1.69
VPS13B-207ENST00000518569 NLRC4Q9NPP4 1024 aa4.47□□□□□ -1.69
VPS13B-207ENST00000518569 KLC4Q9NSK0 619 aa4.47□□□□□ -1.69
VPS13B-207ENST00000518569 DNMT3BQ9UBC3 853 aaKnown RBP4.47□□□□□ -1.69
VPS13B-207ENST00000518569 MYO1AQ9UBC5 1043 aa4.47□□□□□ -1.69
VPS13B-207ENST00000518569 MID2Q9UJV3 735 aa4.47□□□□□ -1.69
VPS13B-207ENST00000518569 ITGB1BP2Q9UKP3 347 aa4.47□□□□□ -1.69
VPS13B-207ENST00000518569 SSX2IPQ9Y2D8 614 aa4.47□□□□□ -1.69
VPS13B-207ENST00000518569 CDY1Q9Y6F8 540 aa4.47□□□□□ -1.69
VPS13B-207ENST00000518569 EPN1Q9Y6I3 576 aaPredicted RBP4.47□□□□□ -1.69
VPS13B-207ENST00000518569 WDR27A2RRH5 827 aa4.46□□□□□ -1.7
VPS13B-207ENST00000518569 CCDC151A5D8V7 595 aa4.46□□□□□ -1.7
VPS13B-207ENST00000518569 AQP7P3A6NL99 342 aa4.46□□□□□ -1.7
VPS13B-207ENST00000518569 OVOL3O00110 214 aa4.46□□□□□ -1.7
VPS13B-207ENST00000518569 FOXN1O15353 648 aa4.46□□□□□ -1.7
VPS13B-207ENST00000518569 TLR5O60602 858 aa4.46□□□□□ -1.7
VPS13B-207ENST00000518569 FGF18O76093 207 aa4.46□□□□□ -1.7
VPS13B-207ENST00000518569 RHOBTB3O94955 611 aa4.46□□□□□ -1.7
VPS13B-207ENST00000518569 A1BGP04217 495 aa4.46□□□□□ -1.7
VPS13B-207ENST00000518569 FGFR2P21802 821 aa4.46□□□□□ -1.7
VPS13B-207ENST00000518569 TNFSF4P23510 183 aa4.46□□□□□ -1.7
VPS13B-207ENST00000518569 CPT1AP50416 773 aa4.46□□□□□ -1.7
VPS13B-207ENST00000518569 PDE6CP51160 858 aa4.46□□□□□ -1.7
VPS13B-207ENST00000518569 BRD3Q15059 726 aa4.46□□□□□ -1.7
VPS13B-207ENST00000518569 ZNF750Q32MQ0 723 aa4.46□□□□□ -1.7
VPS13B-207ENST00000518569 FAM209BQ5JX69 171 aa4.46□□□□□ -1.7
VPS13B-207ENST00000518569 DGKKQ5KSL6 1271 aa4.46□□□□□ -1.7
VPS13B-207ENST00000518569 IZUMO3Q5VZ72 239 aa4.46□□□□□ -1.7
VPS13B-207ENST00000518569 FCRL6Q6DN72 434 aa4.46□□□□□ -1.7
VPS13B-207ENST00000518569 LAIR1Q6GTX8 287 aa4.46□□□□□ -1.7
VPS13B-207ENST00000518569 RGS7BPQ6MZT1 257 aaPredicted RBP4.46□□□□□ -1.7
VPS13B-207ENST00000518569 TOGARAM2Q6ZUX3 1019 aa4.46□□□□□ -1.7
VPS13B-207ENST00000518569 KRT28Q7Z3Y7 464 aa4.46□□□□□ -1.7
VPS13B-207ENST00000518569 SRLQ86TD4 932 aa4.46□□□□□ -1.7
VPS13B-207ENST00000518569 VGLL2Q8N8G2 317 aa4.46□□□□□ -1.7
VPS13B-207ENST00000518569 TOR1AIP2Q8NFQ8 470 aa4.46□□□□□ -1.7
VPS13B-207ENST00000518569 DEPTORQ8TB45 409 aa4.46□□□□□ -1.7
VPS13B-207ENST00000518569 PPP2R3CQ969Q6 453 aa4.46□□□□□ -1.7
VPS13B-207ENST00000518569 RIPOR3Q96MK2 946 aa4.46□□□□□ -1.7
VPS13B-207ENST00000518569 TRIM5Q9C035 493 aa4.46□□□□□ -1.7
VPS13B-207ENST00000518569 CXorf36Q9H7Y0 433 aa4.46□□□□□ -1.7
VPS13B-207ENST00000518569 DKK4Q9UBT3 224 aa4.46□□□□□ -1.7
VPS13B-207ENST00000518569 ZNF212Q9UDV6 495 aa4.46□□□□□ -1.7
VPS13B-207ENST00000518569 PACSIN3Q9UKS6 424 aa4.46□□□□□ -1.7
VPS13B-207ENST00000518569 HDAC9Q9UKV0 1011 aa4.46□□□□□ -1.7
VPS13B-207ENST00000518569 SH2B3Q9UQQ2 575 aa4.46□□□□□ -1.7
VPS13B-207ENST00000518569 ADGRA2Q96PE1 1338 aa4.46□□□□□ -1.7
VPS13B-207ENST00000518569 hCG_1984214I3L0E3 225 aa4.45□□□□□ -1.7
VPS13B-207ENST00000518569 APOL1O14791 398 aa4.45□□□□□ -1.7
VPS13B-207ENST00000518569 SLC16A3O15427 465 aaKnown RBP4.45□□□□□ -1.7
VPS13B-207ENST00000518569 ONECUT2O95948 504 aa4.45□□□□□ -1.7
VPS13B-207ENST00000518569 CSF1RP07333 972 aa4.45□□□□□ -1.7
VPS13B-207ENST00000518569 KRT4P19013 534 aa4.45□□□□□ -1.7
VPS13B-207ENST00000518569 ADRA1BP35368 520 aa4.45□□□□□ -1.7
VPS13B-207ENST00000518569 PRKAG1P54619 331 aa4.45□□□□□ -1.7
VPS13B-207ENST00000518569 RHBDL3P58872 404 aa4.45□□□□□ -1.7
VPS13B-207ENST00000518569 DPTQ07507 201 aa4.45□□□□□ -1.7
VPS13B-207ENST00000518569 FOXI1Q12951 378 aa4.45□□□□□ -1.7
VPS13B-207ENST00000518569 MORC3Q14149 939 aa4.45□□□□□ -1.7
VPS13B-207ENST00000518569 CERCAMQ5T4B2 595 aa4.45□□□□□ -1.7
VPS13B-207ENST00000518569 ZNF618Q5T7W0 954 aa4.45□□□□□ -1.7
VPS13B-207ENST00000518569 HECTD2Q5U5R9 776 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms