RNA–Protein interactions for RNA: ENST00000517534.5

CTNNA1-203, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-203ENST00000517534 CACTINQ8WUQ7 758 aaKnown RBP8.96□□□□□ -0.98
CTNNA1-203ENST00000517534 OSCP1Q8WVF1 389 aa8.96□□□□□ -0.98
CTNNA1-203ENST00000517534 KBTBD7Q8WVZ9 684 aa8.96□□□□□ -0.98
CTNNA1-203ENST00000517534 FUBP3Q96I24 572 aaKnown RBP eCLIP8.96□□□□□ -0.98
CTNNA1-203ENST00000517534 P2RY13Q9BPV8 354 aa8.96□□□□□ -0.98
CTNNA1-203ENST00000517534 PANK2Q9BZ23 570 aa8.96□□□□□ -0.98
CTNNA1-203ENST00000517534 DUSP15Q9H1R2 295 aaPredicted RBP8.96□□□□□ -0.98
CTNNA1-203ENST00000517534 LINC00597Q9H2U6 94 aa8.96□□□□□ -0.98
CTNNA1-203ENST00000517534 PCIF1Q9H4Z3 704 aa8.96□□□□□ -0.98
CTNNA1-203ENST00000517534 CCDC39Q9UFE4 941 aa8.96□□□□□ -0.98
CTNNA1-203ENST00000517534 ITGA11Q9UKX5 1188 aa8.96□□□□□ -0.98
CTNNA1-203ENST00000517534 SLC8A2Q9UPR5 921 aa8.96□□□□□ -0.98
CTNNA1-203ENST00000517534 SNX9Q9Y5X1 595 aa8.96□□□□□ -0.98
CTNNA1-203ENST00000517534 WNT6Q9Y6F9 365 aa8.96□□□□□ -0.98
CTNNA1-203ENST00000517534 MORC2Q9Y6X9 1032 aaPredicted RBP8.96□□□□□ -0.98
CTNNA1-203ENST00000517534 PTPRJQ12913 1337 aa8.96□□□□□ -0.98
CTNNA1-203ENST00000517534 ANTXRLA6NF34 631 aa8.95□□□□□ -0.98
CTNNA1-203ENST00000517534 PRPF6O94906 941 aaKnown RBP8.95□□□□□ -0.98
CTNNA1-203ENST00000517534 TCF3P15923 654 aa8.95□□□□□ -0.98
CTNNA1-203ENST00000517534 PMLP29590 882 aa8.95□□□□□ -0.98
CTNNA1-203ENST00000517534 HOXD13P35453 343 aa8.95□□□□□ -0.98
CTNNA1-203ENST00000517534 MAGEA11P43364 429 aa8.95□□□□□ -0.98
CTNNA1-203ENST00000517534 LHX1P48742 406 aa8.95□□□□□ -0.98
CTNNA1-203ENST00000517534 FBXO43Q4G163 708 aa8.95□□□□□ -0.98
CTNNA1-203ENST00000517534 AASDHQ4L235 1098 aaPredicted RBP8.95□□□□□ -0.98
CTNNA1-203ENST00000517534 N4BP2L1Q5TBK1 243 aaPredicted RBP8.95□□□□□ -0.98
CTNNA1-203ENST00000517534 LMBRD2Q68DH5 695 aaPredicted RBP8.95□□□□□ -0.98
CTNNA1-203ENST00000517534 CC2D1AQ6P1N0 951 aaPredicted RBP8.95□□□□□ -0.98
CTNNA1-203ENST00000517534 SYT13Q7L8C5 426 aa8.95□□□□□ -0.98
CTNNA1-203ENST00000517534 DPH6Q7L8W6 267 aa8.95□□□□□ -0.98
CTNNA1-203ENST00000517534 SCN4BQ8IWT1 228 aa8.95□□□□□ -0.98
CTNNA1-203ENST00000517534 ADGRF2Q8IZF7 708 aa8.95□□□□□ -0.98
CTNNA1-203ENST00000517534 ARL14EPQ8N8R7 260 aaPredicted RBP8.95□□□□□ -0.98
CTNNA1-203ENST00000517534 GLIS3Q8NEA6 775 aa8.95□□□□□ -0.98
CTNNA1-203ENST00000517534 RPLP0P6Q8NHW5 317 aa8.95□□□□□ -0.98
CTNNA1-203ENST00000517534 SH3RF2Q8TEC5 729 aa8.95□□□□□ -0.98
CTNNA1-203ENST00000517534 DDX1Q92499 740 aaKnown RBP8.95□□□□□ -0.98
CTNNA1-203ENST00000517534 CD101Q93033 1021 aa8.95□□□□□ -0.98
CTNNA1-203ENST00000517534 HHIPQ96QV1 700 aa8.95□□□□□ -0.98
CTNNA1-203ENST00000517534 MTMR12Q9C0I1 747 aa8.95□□□□□ -0.98
CTNNA1-203ENST00000517534 SMOC1Q9H4F8 434 aa8.95□□□□□ -0.98
CTNNA1-203ENST00000517534 TMEM206Q9H813 350 aa8.95□□□□□ -0.98
CTNNA1-203ENST00000517534 TRPC7Q9HCX4 862 aa8.95□□□□□ -0.98
CTNNA1-203ENST00000517534 CRTAC1Q9NQ79 661 aa8.95□□□□□ -0.98
CTNNA1-203ENST00000517534 INTS13Q9NVM9 706 aa8.95□□□□□ -0.98
CTNNA1-203ENST00000517534 DUS2Q9NX74 493 aaKnown RBP8.95□□□□□ -0.98
CTNNA1-203ENST00000517534 UXTQ9UBK9 157 aaPredicted RBP8.95□□□□□ -0.98
CTNNA1-203ENST00000517534 NME7Q9Y5B8 376 aa8.95□□□□□ -0.98
CTNNA1-203ENST00000517534 PCDHGA5Q9Y5G8 931 aa8.95□□□□□ -0.98
CTNNA1-203ENST00000517534 ZZEF1O43149 2961 aa8.95□□□□□ -0.98
CTNNA1-203ENST00000517534 MYH11P35749 1972 aa8.95□□□□□ -0.98
CTNNA1-203ENST00000517534 CACNA1GO43497 2377 aa8.94□□□□□ -0.98
CTNNA1-203ENST00000517534 TSC2P49815 1807 aa8.94□□□□□ -0.98
CTNNA1-203ENST00000517534 TRAV19A0A0A6YYK7 116 aa8.94□□□□□ -0.98
CTNNA1-203ENST00000517534 VPS37CA5D8V6 355 aaPredicted RBP8.94□□□□□ -0.98
CTNNA1-203ENST00000517534 C2orf78A6NCI8 922 aa8.94□□□□□ -0.98
CTNNA1-203ENST00000517534 DCLK1O15075 740 aa8.94□□□□□ -0.98
CTNNA1-203ENST00000517534 CKMP06732 381 aa8.94□□□□□ -0.98
CTNNA1-203ENST00000517534 KRT19P08727 400 aa8.94□□□□□ -0.98
CTNNA1-203ENST00000517534 USP17L7P0C7H9 530 aa8.94□□□□□ -0.98
CTNNA1-203ENST00000517534 CCDC192P0DO97 292 aa8.94□□□□□ -0.98
CTNNA1-203ENST00000517534 IDEP14735 1019 aa8.94□□□□□ -0.98
CTNNA1-203ENST00000517534 SYT1P21579 422 aa8.94□□□□□ -0.98
CTNNA1-203ENST00000517534 PCSK1P29120 753 aa8.94□□□□□ -0.98
CTNNA1-203ENST00000517534 USP46P62068 366 aa8.94□□□□□ -0.98
CTNNA1-203ENST00000517534 CEBPZQ03701 1054 aaKnown RBP8.94□□□□□ -0.98
CTNNA1-203ENST00000517534 ALCAMQ13740 583 aa8.94□□□□□ -0.98
CTNNA1-203ENST00000517534 DMC1Q14565 340 aa8.94□□□□□ -0.98
CTNNA1-203ENST00000517534 DUOXA2Q1HG44 320 aa8.94□□□□□ -0.98
CTNNA1-203ENST00000517534 GAB4Q2WGN9 574 aa8.94□□□□□ -0.98
CTNNA1-203ENST00000517534 STPG1Q5TH74 334 aa8.94□□□□□ -0.98
CTNNA1-203ENST00000517534 VSTM1Q6UX27 236 aa8.94□□□□□ -0.98
CTNNA1-203ENST00000517534 CCDC73Q6ZRK6 1079 aa8.94□□□□□ -0.98
CTNNA1-203ENST00000517534 CBWD2Q8IUF1 395 aa8.94□□□□□ -0.98
CTNNA1-203ENST00000517534 SPATA2LQ8IUW3 424 aaPredicted RBP8.94□□□□□ -0.98
CTNNA1-203ENST00000517534 SYCP3Q8IZU3 236 aa8.94□□□□□ -0.98
CTNNA1-203ENST00000517534 GPD1LQ8N335 351 aa8.94□□□□□ -0.98
CTNNA1-203ENST00000517534 CPA6Q8N4T0 437 aa8.94□□□□□ -0.98
CTNNA1-203ENST00000517534 C12orf50Q8NA57 414 aaPredicted RBP8.94□□□□□ -0.98
CTNNA1-203ENST00000517534 ATP2A3Q93084 1043 aa8.94□□□□□ -0.98
CTNNA1-203ENST00000517534 HPS3Q969F9 1004 aa8.94□□□□□ -0.98
CTNNA1-203ENST00000517534 MYLPFQ96A32 169 aa8.94□□□□□ -0.98
CTNNA1-203ENST00000517534 HPDLQ96IR7 371 aa8.94□□□□□ -0.98
CTNNA1-203ENST00000517534 SPATA17Q96L03 361 aa8.94□□□□□ -0.98
CTNNA1-203ENST00000517534 USP28Q96RU2 1077 aa8.94□□□□□ -0.98
CTNNA1-203ENST00000517534 SYT15Q9BQS2 421 aa8.94□□□□□ -0.98
CTNNA1-203ENST00000517534 PANK4Q9NVE7 773 aa8.94□□□□□ -0.98
CTNNA1-203ENST00000517534 EBF1Q9UH73 591 aa8.94□□□□□ -0.98
CTNNA1-203ENST00000517534 CDH9Q9ULB4 789 aa8.94□□□□□ -0.98
CTNNA1-203ENST00000517534 ARHGAP26Q9UNA1 814 aa8.94□□□□□ -0.98
CTNNA1-203ENST00000517534 MTMR6Q9Y217 621 aa8.94□□□□□ -0.98
CTNNA1-203ENST00000517534 IGF2RP11717 2491 aa8.93□□□□□ -0.98
CTNNA1-203ENST00000517534 ZFYVE26Q68DK2 2539 aa8.93□□□□□ -0.98
CTNNA1-203ENST00000517534 ZNF840PA6NDX5 716 aa8.93□□□□□ -0.98
CTNNA1-203ENST00000517534 ZNF233A6NK53 670 aa8.93□□□□□ -0.98
CTNNA1-203ENST00000517534 K7EQS6 105 aa8.93□□□□□ -0.98
CTNNA1-203ENST00000517534 LEFTY2O00292 366 aa8.93□□□□□ -0.98
CTNNA1-203ENST00000517534 TULP1O00294 542 aaPredicted RBP8.93□□□□□ -0.98
CTNNA1-203ENST00000517534 APBB3O95704 486 aa8.93□□□□□ -0.98
CTNNA1-203ENST00000517534 CST3P01034 146 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms