RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 LRRC38Q5VT99 294 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 C1orf228Q6PIY5 440 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 SETD3Q86TU7 594 aaPredicted RBP6.95□□□□□ -1.3
CPNE3-203ENST00000517490 NMD3Q96D46 503 aaKnown RBP6.95□□□□□ -1.3
CPNE3-203ENST00000517490 CATSPER2Q96P56 530 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 TSPYL2Q9H2G4 693 aaPredicted RBP6.95□□□□□ -1.3
CPNE3-203ENST00000517490 NGRNQ9NPE2 291 aaKnown RBP6.95□□□□□ -1.3
CPNE3-203ENST00000517490 ANLNQ9NQW6 1124 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 VAV3Q9UKW4 847 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 PAIP2BQ9ULR5 123 aaKnown RBP6.95□□□□□ -1.3
CPNE3-203ENST00000517490 CDY2AQ9Y6F7 541 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 CDY1Q9Y6F8 540 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 UMODL1Q5DID0 1318 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 USP54Q70EL1 1684 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 TGDSO95455 350 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 FAM200BP0CF97 657 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 ZFXP17010 805 aaPredicted RBP6.94□□□□□ -1.3
CPNE3-203ENST00000517490 NLRP11P59045 1033 aaKnown RBP6.94□□□□□ -1.3
CPNE3-203ENST00000517490 XIAPP98170 497 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 GRIK5Q16478 980 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 CDO1Q16878 200 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 DUOXA2Q1HG44 320 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 AAGABQ6PD74 315 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 ENDOVQ8N8Q3 282 aaKnown RBP6.94□□□□□ -1.3
CPNE3-203ENST00000517490 RDM1Q8NG50 284 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 ACTL9Q8TC94 416 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 GDPD5Q8WTR4 605 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 ZFAND2BQ8WV99 257 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 PRPF31Q8WWY3 499 aaKnown RBP6.94□□□□□ -1.3
CPNE3-203ENST00000517490 MKL1Q969V6 931 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 ZFRQ96KR1 1074 aaKnown RBP6.94□□□□□ -1.3
CPNE3-203ENST00000517490 HEXIM2Q96MH2 286 aaKnown RBP6.94□□□□□ -1.3
CPNE3-203ENST00000517490 SRPK1Q96SB4 655 aaKnown RBP6.94□□□□□ -1.3
CPNE3-203ENST00000517490 ACSS3Q9H6R3 686 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 KCNQ5Q9NR82 932 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 TOPORSQ9NS56 1045 aaPredicted RBP6.94□□□□□ -1.3
CPNE3-203ENST00000517490 NKX1-2Q9UD57 310 aaPredicted RBP6.94□□□□□ -1.3
CPNE3-203ENST00000517490 PPME1Q9Y570 386 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 TCF3P15923 654 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 DNAJA1P31689 397 aaKnown RBP6.94□□□□□ -1.3
CPNE3-203ENST00000517490 NPTX2P47972 431 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 ACOT2P49753 483 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 CCNG1P51959 295 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 WDR4P57081 412 aaKnown RBP6.94□□□□□ -1.3
CPNE3-203ENST00000517490 STX1BP61266 288 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 MTM1Q13496 603 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 SLC1A5Q15758 541 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 KHDC1Q4VXA5 237 aaKnown RBP6.94□□□□□ -1.3
CPNE3-203ENST00000517490 PRR5LQ6MZQ0 368 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 GPAT2Q6NUI2 795 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 ARMCX6Q7L4S7 300 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 C10orf82Q8WW14 230 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 ACSF2Q96CM8 615 aaPredicted RBP6.94□□□□□ -1.3
CPNE3-203ENST00000517490 MPP4Q96JB8 637 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 CADM1Q9BY67 442 aaKnown RBP6.94□□□□□ -1.3
CPNE3-203ENST00000517490 TRPV6Q9H1D0 765 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 ADAM7Q9H2U9 754 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 DMAC2Q9NW81 257 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 MYH10P35580 1976 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 CARNS1A5YM72 827 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 ZBTB39O15060 712 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 MAGEB2O15479 319 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 MAGEC1O60732 1142 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 GLRA3O75311 464 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 ENTPD3O75355 529 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 S100BP04271 92 aaPredicted RBP6.94□□□□□ -1.3
CPNE3-203ENST00000517490 ITGAVP06756 1048 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 ZSCAN5DPP0CG00 497 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 CNTFP26441 200 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 CMPK2Q5EBM0 449 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 FAM102AQ5T9C2 384 aaPredicted RBP6.94□□□□□ -1.3
CPNE3-203ENST00000517490 PLA2G4FQ68DD2 849 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 SWSAP1Q6NVH7 229 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 RIPOR1Q6ZS17 1223 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 CYP4X1Q8N118 509 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 MBOAT7Q96N66 472 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 TRIM15Q9C019 465 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 LRRC4CQ9HCJ2 640 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 GPAMQ9HCL2 828 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 ACP6Q9NPH0 428 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 ATXN10Q9UBB4 475 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 PRKAG3Q9UGI9 489 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 SPATA31A1Q5TZJ5 1347 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 PHRF1Q9P1Y6 1649 aaKnown RBP6.94□□□□□ -1.3
CPNE3-203ENST00000517490 A0A1W2PPM1 405 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 FOXO6A8MYZ6 492 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 ASNSP08243 561 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 SAT1P21673 171 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 ELK3P41970 407 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 RARRES1P49788 294 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 PHEXP78562 749 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 SMTNL2Q2TAL5 461 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 PPP6R3Q5H9R7 873 aaPredicted RBP6.94□□□□□ -1.3
CPNE3-203ENST00000517490 MROH9Q5TGP6 573 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 HEATR6Q6AI08 1181 aaKnown RBP6.94□□□□□ -1.3
CPNE3-203ENST00000517490 GRAMD4Q6IC98 578 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 SPOPLQ6IQ16 392 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 SMIM5Q71RC9 77 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 DNAAF3Q8N9W5 541 aa6.94□□□□□ -1.3
CPNE3-203ENST00000517490 SLITRK1Q96PX8 696 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms