RNA–Protein interactions for RNA: ENST00000517114.1

SCARNA16.5-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.5-201ENST00000517114 CHRM5P08912 532 aaPredicted RBP0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 FAM90A13PP0C7W8 464 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 FAM90A24PP0C7X0 464 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 TNFRSF1BP20333 461 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 SMARCA1P28370 1054 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 ADORA2AP29274 412 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 CNGA1P29973 690 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 PRDX5P30044 214 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 PPIFP30405 207 aaKnown RBP0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 CYP2C19P33261 490 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 THBS4P35443 961 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 CDKN2AP42771 156 aaKnown RBP0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 KCNJ5P48544 419 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 PXNP49023 591 aaPredicted RBP0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 LOXL3P58215 753 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 KRTAP10-5P60370 271 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 YPEL5P62699 121 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 HTRA4P83105 476 aaPredicted RBP0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 E2F1Q01094 437 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 DSC2Q02487 901 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 GHRHRQ02643 423 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 EXOSC9Q06265 439 aaKnown RBP0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 HYAL1Q12794 435 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 TCF15Q12870 199 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 NOGQ13253 232 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 FHL3Q13643 280 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 GTF2H3Q13889 308 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 CYP1B1Q16678 543 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 FAM187BQ17R55 369 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 LY6KQ17RY6 165 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 ODF3L2Q3SX64 289 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 ZIK1Q3SY52 487 aaPredicted RBP0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 LONRF3Q496Y0 759 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 ZNF628Q5EBL2 1059 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 RNASE12Q5GAN4 147 aaKnown RBP0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 UBAP2Q5T6F2 1119 aaKnown RBP0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 C10orf25Q5T742 122 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 FAM160B1Q5W0V3 765 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 ICE2Q659A1 982 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 ZNF549Q6P9A3 640 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 PGM2L1Q6PCE3 622 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 LAYNQ6UX15 382 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 ZNF813Q6ZN06 617 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 COLCA1Q6ZS62 124 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 HEATR3Q7Z4Q2 680 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 BCDIN3DQ7Z5W3 292 aaKnown RBP0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 USP37Q86T82 979 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 PPP1R3BQ86XI6 285 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 FAM90A1Q86YD7 464 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 PDSS2Q86YH6 399 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 KRT78Q8N1N4 520 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 PELI3Q8N2H9 469 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 GALNT4Q8N4A0 578 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 CNTD1Q8N815 330 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 C1orf162Q8NEQ5 155 aaPredicted RBP0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 ABHD11Q8NFV4 315 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 ATL2Q8NHH9 583 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 RP9Q8TA86 221 aaKnown RBP0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 OSR1Q8TAX0 266 aaPredicted RBP0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 WDR66Q8TBY9 1149 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 ASB5Q8WWX0 329 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 IGFBPL1Q8WX77 278 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 MAP4K1Q92918 833 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 COA7Q96BR5 231 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 LMLNQ96KR4 655 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 LYZL4Q96KX0 146 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 TEKT5Q96M29 485 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 DRC1Q96MC2 740 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 SNX18Q96RF0 628 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 PRR25Q96S07 402 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 FAM118BQ9BPY3 351 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 TMEM79Q9BSE2 394 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 THAP7Q9BT49 309 aaPredicted RBP0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 TRMOQ9BU70 441 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 FAM234AQ9H0X4 552 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 VPS33BQ9H267 617 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 MRPL46Q9H2W6 279 aaKnown RBP0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 CXorf36Q9H7Y0 433 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 ST6GALNAC1Q9NSC7 600 aaPredicted RBP0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 ZBTB40Q9NUA8 1239 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 RLIMQ9NVW2 624 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 MKS1Q9NXB0 559 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 HEY2Q9UBP5 337 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 LPAR3Q9UBY5 353 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 ABCF2Q9UG63 623 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 FEZ2Q9UHY8 353 aaPredicted RBP0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 ZNF112Q9UJU3 913 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 NDRG4Q9ULP0 352 aaKnown RBP0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 GABRQQ9UN88 632 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 SH2B3Q9UQQ2 575 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 MRPS17Q9Y2R5 130 aaKnown RBP0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 TBX22Q9Y458 520 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 PCDHGA9Q9Y5G4 932 aaKnown RBP0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 PCDHGA8Q9Y5G5 932 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 PCDHGA7Q9Y5G6 932 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 PCDHGA6Q9Y5G7 932 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 PCDHGA3Q9Y5H0 932 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 PCDHA3Q9Y5H8 950 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 PCDHA1Q9Y5I3 950 aa0.71□□□□□ -2.3
SCARNA16.5-201ENST00000517114 UTP18Q9Y5J1 556 aaKnown RBP eCLIP0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms