RNA–Protein interactions for RNA: ENST00000516675.1

RN7SKP49-201, Transcript of RNA, 7SK small nuclear pseudogene 49, humanhuman

BASIC

Gene RN7SKP49, Length 260 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP49-201ENST00000516675 TBC1D30Q9Y2I9 924 aa2.79□□□□□ -1.96
RN7SKP49-201ENST00000516675 THRAP3Q9Y2W1 955 aaKnown RBP2.79□□□□□ -1.96
RN7SKP49-201ENST00000516675 TMX2Q9Y320 296 aa2.79□□□□□ -1.96
RN7SKP49-201ENST00000516675 NESP48681 1621 aa2.79□□□□□ -1.96
RN7SKP49-201ENST00000516675 CACNA1IQ9P0X4 2223 aa2.78□□□□□ -1.96
RN7SKP49-201ENST00000516675 TISP43B9A030 160 aa2.78□□□□□ -1.96
RN7SKP49-201ENST00000516675 H3BML4 177 aa2.78□□□□□ -1.96
RN7SKP49-201ENST00000516675 BTN3A1O00481 513 aa2.78□□□□□ -1.96
RN7SKP49-201ENST00000516675 ERC2O15083 957 aa2.78□□□□□ -1.96
RN7SKP49-201ENST00000516675 PRPF3O43395 683 aaKnown RBP2.78□□□□□ -1.96
RN7SKP49-201ENST00000516675 JTBO76095 146 aa2.78□□□□□ -1.96
RN7SKP49-201ENST00000516675 PDE8BO95263 885 aa2.78□□□□□ -1.96
RN7SKP49-201ENST00000516675 VNN1O95497 513 aa2.78□□□□□ -1.96
RN7SKP49-201ENST00000516675 LATS1O95835 1130 aa2.78□□□□□ -1.96
RN7SKP49-201ENST00000516675 PRR35P0CG20 571 aa2.78□□□□□ -1.96
RN7SKP49-201ENST00000516675 PPIFP30405 207 aaKnown RBP2.78□□□□□ -1.96
RN7SKP49-201ENST00000516675 VIPR2P41587 438 aa2.78□□□□□ -1.96
RN7SKP49-201ENST00000516675 ARFIP2P53365 341 aa2.78□□□□□ -1.96
RN7SKP49-201ENST00000516675 ATXN1P54253 815 aaKnown RBP2.78□□□□□ -1.96
RN7SKP49-201ENST00000516675 KRT17Q04695 432 aa2.78□□□□□ -1.96
RN7SKP49-201ENST00000516675 E2F2Q14209 437 aa2.78□□□□□ -1.96
RN7SKP49-201ENST00000516675 LLGL1Q15334 1064 aa2.78□□□□□ -1.96
RN7SKP49-201ENST00000516675 LRRC41Q15345 812 aa2.78□□□□□ -1.96
RN7SKP49-201ENST00000516675 AARS2Q5JTZ9 985 aaKnown RBP2.78□□□□□ -1.96
RN7SKP49-201ENST00000516675 PCID2Q5JVF3 399 aa2.78□□□□□ -1.96
RN7SKP49-201ENST00000516675 DEPDC1Q5TB30 811 aa2.78□□□□□ -1.96
RN7SKP49-201ENST00000516675 SWSAP1Q6NVH7 229 aa2.78□□□□□ -1.96
RN7SKP49-201ENST00000516675 OVCH2Q7RTZ1 564 aa2.78□□□□□ -1.96
RN7SKP49-201ENST00000516675 DNAJC5GQ8N7S2 189 aa2.78□□□□□ -1.96
RN7SKP49-201ENST00000516675 XAGE5Q8WWM1 108 aa2.78□□□□□ -1.96
RN7SKP49-201ENST00000516675 RAPGEF4Q8WZA2 1011 aa2.78□□□□□ -1.96
RN7SKP49-201ENST00000516675 TBC1D5Q92609 795 aa2.78□□□□□ -1.96
RN7SKP49-201ENST00000516675 AIFM3Q96NN9 605 aa2.78□□□□□ -1.96
RN7SKP49-201ENST00000516675 MESP1Q9BRJ9 268 aa2.78□□□□□ -1.96
RN7SKP49-201ENST00000516675 QTRT1Q9BXR0 403 aaKnown RBP2.78□□□□□ -1.96
RN7SKP49-201ENST00000516675 TRIM54Q9BYV2 358 aa2.78□□□□□ -1.96
RN7SKP49-201ENST00000516675 GLOD4Q9HC38 313 aa2.78□□□□□ -1.96
RN7SKP49-201ENST00000516675 NMRK2Q9NPI5 230 aa2.78□□□□□ -1.96
RN7SKP49-201ENST00000516675 CNNM1Q9NRU3 951 aa2.78□□□□□ -1.96
RN7SKP49-201ENST00000516675 PIH1D1Q9NWS0 290 aaKnown RBP2.78□□□□□ -1.96
RN7SKP49-201ENST00000516675 NOB1Q9ULX3 412 aaKnown RBP2.78□□□□□ -1.96
RN7SKP49-201ENST00000516675 SHOC2Q9UQ13 582 aa2.78□□□□□ -1.96
RN7SKP49-201ENST00000516675 SRCAPQ6ZRS2 3230 aa2.77□□□□□ -1.97
RN7SKP49-201ENST00000516675 A0A087WWL8 130 aa2.77□□□□□ -1.97
RN7SKP49-201ENST00000516675 A0A1W2PPL8 197 aa2.77□□□□□ -1.97
RN7SKP49-201ENST00000516675 E2F8A0AVK6 867 aa2.77□□□□□ -1.97
RN7SKP49-201ENST00000516675 MYO1CO00159 1063 aa2.77□□□□□ -1.97
RN7SKP49-201ENST00000516675 RFPL1O75677 317 aa2.77□□□□□ -1.97
RN7SKP49-201ENST00000516675 ONECUT2O95948 504 aa2.77□□□□□ -1.97
RN7SKP49-201ENST00000516675 CYP2D6P10635 497 aa2.77□□□□□ -1.97
RN7SKP49-201ENST00000516675 KCNA3P22001 575 aa2.77□□□□□ -1.97
RN7SKP49-201ENST00000516675 CTGFP29279 349 aa2.77□□□□□ -1.97
RN7SKP49-201ENST00000516675 PDE6CP51160 858 aa2.77□□□□□ -1.97
RN7SKP49-201ENST00000516675 DGKEP52429 567 aa2.77□□□□□ -1.97
RN7SKP49-201ENST00000516675 KRTAP10-11P60412 298 aa2.77□□□□□ -1.97
RN7SKP49-201ENST00000516675 SLC10A2Q12908 348 aaPredicted RBP2.77□□□□□ -1.97
RN7SKP49-201ENST00000516675 EZH2Q15910 746 aaKnown RBP2.77□□□□□ -1.97
RN7SKP49-201ENST00000516675 SRSF7Q16629 238 aaKnown RBP eCLIP2.77□□□□□ -1.97
RN7SKP49-201ENST00000516675 PTCHD3Q3KNS1 767 aa2.77□□□□□ -1.97
RN7SKP49-201ENST00000516675 MTX3Q5HYI7 312 aa2.77□□□□□ -1.97
RN7SKP49-201ENST00000516675 CEP78Q5JTW2 689 aa2.77□□□□□ -1.97
RN7SKP49-201ENST00000516675 PRAMEF17Q5VTA0 474 aa2.77□□□□□ -1.97
RN7SKP49-201ENST00000516675 ZNF626Q68DY1 528 aa2.77□□□□□ -1.97
RN7SKP49-201ENST00000516675 NPNTQ6UXI9 565 aa2.77□□□□□ -1.97
RN7SKP49-201ENST00000516675 DPY19L3Q6ZPD9 716 aa2.77□□□□□ -1.97
RN7SKP49-201ENST00000516675 Q6ZWC4 215 aa2.77□□□□□ -1.97
RN7SKP49-201ENST00000516675 PARS2Q7L3T8 475 aaKnown RBP2.77□□□□□ -1.97
RN7SKP49-201ENST00000516675 YTHDF3Q7Z739 585 aaKnown RBP2.77□□□□□ -1.97
RN7SKP49-201ENST00000516675 CHSY1Q86X52 802 aa2.77□□□□□ -1.97
RN7SKP49-201ENST00000516675 TMEM171Q8WVE6 324 aa2.77□□□□□ -1.97
RN7SKP49-201ENST00000516675 MOGAT1Q96PD6 335 aa2.77□□□□□ -1.97
RN7SKP49-201ENST00000516675 FSD1LQ9BXM9 530 aa2.77□□□□□ -1.97
RN7SKP49-201ENST00000516675 B3GNT5Q9BYG0 378 aa2.77□□□□□ -1.97
RN7SKP49-201ENST00000516675 MS4A7Q9GZW8 240 aaPredicted RBP2.77□□□□□ -1.97
RN7SKP49-201ENST00000516675 SMURF2Q9HAU4 748 aa2.77□□□□□ -1.97
RN7SKP49-201ENST00000516675 FLRT1Q9NZU1 646 aa2.77□□□□□ -1.97
RN7SKP49-201ENST00000516675 CCNL1Q9UK58 526 aaPredicted RBP2.77□□□□□ -1.97
RN7SKP49-201ENST00000516675 ADAMTS5Q9UNA0 930 aa2.77□□□□□ -1.97
RN7SKP49-201ENST00000516675 SNX14Q9Y5W7 946 aa2.77□□□□□ -1.97
RN7SKP49-201ENST00000516675 KIF13AQ9H1H9 1805 aa2.77□□□□□ -1.97
RN7SKP49-201ENST00000516675 USP19O94966 1318 aa2.76□□□□□ -1.97
RN7SKP49-201ENST00000516675 LOC105371045A0A1W2PR82 267 aa2.76□□□□□ -1.97
RN7SKP49-201ENST00000516675 PRRT4C9JH25 899 aa2.76□□□□□ -1.97
RN7SKP49-201ENST00000516675 TBX3O15119 743 aa2.76□□□□□ -1.97
RN7SKP49-201ENST00000516675 TP73O15350 636 aa2.76□□□□□ -1.97
RN7SKP49-201ENST00000516675 CTNND1O60716 968 aaKnown RBP2.76□□□□□ -1.97
RN7SKP49-201ENST00000516675 TUSC2O75896 110 aa2.76□□□□□ -1.97
RN7SKP49-201ENST00000516675 THP07101 528 aa2.76□□□□□ -1.97
RN7SKP49-201ENST00000516675 NPSP0C0P6 89 aa2.76□□□□□ -1.97
RN7SKP49-201ENST00000516675 FPR3P25089 353 aa2.76□□□□□ -1.97
RN7SKP49-201ENST00000516675 EPHB2P29323 1055 aa2.76□□□□□ -1.97
RN7SKP49-201ENST00000516675 LRPAP1P30533 357 aa2.76□□□□□ -1.97
RN7SKP49-201ENST00000516675 AGFG1P52594 562 aaKnown RBP2.76□□□□□ -1.97
RN7SKP49-201ENST00000516675 EPHB1P54762 984 aa2.76□□□□□ -1.97
RN7SKP49-201ENST00000516675 SSBP2P81877 361 aaPredicted RBP2.76□□□□□ -1.97
RN7SKP49-201ENST00000516675 SLC13A2Q13183 592 aa2.76□□□□□ -1.97
RN7SKP49-201ENST00000516675 GTF2H3Q13889 308 aa2.76□□□□□ -1.97
RN7SKP49-201ENST00000516675 CYP1B1Q16678 543 aa2.76□□□□□ -1.97
RN7SKP49-201ENST00000516675 SUPT20HL1Q3ZLR7 823 aa2.76□□□□□ -1.97
RN7SKP49-201ENST00000516675 ANO6Q4KMQ2 910 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms