RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 SOCS4Q8WXH5 440 aa3.26□□□□□ -1.89
SCARNA16.2-201ENST00000516520 ZBTB9Q96C00 473 aa3.26□□□□□ -1.89
SCARNA16.2-201ENST00000516520 CHMP4CQ96CF2 233 aa3.26□□□□□ -1.89
SCARNA16.2-201ENST00000516520 R3HDM4Q96D70 268 aa3.26□□□□□ -1.89
SCARNA16.2-201ENST00000516520 GTPBP4Q9BZE4 634 aaKnown RBP3.26□□□□□ -1.89
SCARNA16.2-201ENST00000516520 ANLNQ9NQW6 1124 aa3.26□□□□□ -1.89
SCARNA16.2-201ENST00000516520 NDRG4Q9ULP0 352 aaKnown RBP3.26□□□□□ -1.89
SCARNA16.2-201ENST00000516520 GABRQQ9UN88 632 aa3.26□□□□□ -1.89
SCARNA16.2-201ENST00000516520 STXBP5LQ9Y2K9 1186 aa3.26□□□□□ -1.89
SCARNA16.2-201ENST00000516520 MED16Q9Y2X0 877 aa3.26□□□□□ -1.89
SCARNA16.2-201ENST00000516520 LUC7L2Q9Y383 392 aaKnown RBP3.26□□□□□ -1.89
SCARNA16.2-201ENST00000516520 MYO1CO00159 1063 aa3.25□□□□□ -1.89
SCARNA16.2-201ENST00000516520 ERC2O15083 957 aa3.25□□□□□ -1.89
SCARNA16.2-201ENST00000516520 TOP3BO95985 862 aaKnown RBP3.25□□□□□ -1.89
SCARNA16.2-201ENST00000516520 TRIP6Q15654 476 aaKnown RBP3.25□□□□□ -1.89
SCARNA16.2-201ENST00000516520 KHDC1LQ5JSQ8 128 aa3.25□□□□□ -1.89
SCARNA16.2-201ENST00000516520 MIS18BP1Q6P0N0 1132 aa3.25□□□□□ -1.89
SCARNA16.2-201ENST00000516520 SLC2A7Q6PXP3 512 aa3.25□□□□□ -1.89
SCARNA16.2-201ENST00000516520 KIRREL2Q6UWL6 708 aa3.25□□□□□ -1.89
SCARNA16.2-201ENST00000516520 CNGA4Q8IV77 575 aa3.25□□□□□ -1.89
SCARNA16.2-201ENST00000516520 SLC15A3Q8IY34 581 aa3.25□□□□□ -1.89
SCARNA16.2-201ENST00000516520 TERB1Q8NA31 727 aa3.25□□□□□ -1.89
SCARNA16.2-201ENST00000516520 C8orf58Q8NAV2 365 aa3.25□□□□□ -1.89
SCARNA16.2-201ENST00000516520 PIGOQ8TEQ8 1089 aa3.25□□□□□ -1.89
SCARNA16.2-201ENST00000516520 OSCP1Q8WVF1 389 aa3.25□□□□□ -1.89
SCARNA16.2-201ENST00000516520 HMCESQ96FZ2 354 aa3.25□□□□□ -1.89
SCARNA16.2-201ENST00000516520 C5orf34Q96MH7 638 aa3.25□□□□□ -1.89
SCARNA16.2-201ENST00000516520 SNX18Q96RF0 628 aa3.25□□□□□ -1.89
SCARNA16.2-201ENST00000516520 MAP3K14Q99558 947 aa3.25□□□□□ -1.89
SCARNA16.2-201ENST00000516520 SH2D3AQ9BRG2 576 aa3.25□□□□□ -1.89
SCARNA16.2-201ENST00000516520 TMEM79Q9BSE2 394 aa3.25□□□□□ -1.89
SCARNA16.2-201ENST00000516520 VPS16Q9H269 839 aa3.25□□□□□ -1.89
SCARNA16.2-201ENST00000516520 TCF7L1Q9HCS4 588 aa3.25□□□□□ -1.89
SCARNA16.2-201ENST00000516520 HOMER2Q9NSB8 354 aa3.25□□□□□ -1.89
SCARNA16.2-201ENST00000516520 TRMT13Q9NUP7 481 aaKnown RBP3.25□□□□□ -1.89
SCARNA16.2-201ENST00000516520 XPR1Q9UBH6 696 aa3.25□□□□□ -1.89
SCARNA16.2-201ENST00000516520 PCDHA6Q9UN73 950 aa3.25□□□□□ -1.89
SCARNA16.2-201ENST00000516520 TMX2Q9Y320 296 aa3.25□□□□□ -1.89
SCARNA16.2-201ENST00000516520 COL4A3BPQ9Y5P4 624 aa3.25□□□□□ -1.89
SCARNA16.2-201ENST00000516520 CADPSQ9ULU8 1353 aa3.25□□□□□ -1.89
SCARNA16.2-201ENST00000516520 SMIM35A0A1B0GVV1 85 aa3.24□□□□□ -1.89
SCARNA16.2-201ENST00000516520 KCNU1A8MYU2 1149 aa3.24□□□□□ -1.89
SCARNA16.2-201ENST00000516520 ARHGAP25P42331 645 aa3.24□□□□□ -1.89
SCARNA16.2-201ENST00000516520 SP2Q02086 613 aa3.24□□□□□ -1.89
SCARNA16.2-201ENST00000516520 KRT17Q04695 432 aa3.24□□□□□ -1.89
SCARNA16.2-201ENST00000516520 MYO1EQ12965 1108 aa3.24□□□□□ -1.89
SCARNA16.2-201ENST00000516520 DAZAP2Q15038 168 aaPredicted RBP3.24□□□□□ -1.89
SCARNA16.2-201ENST00000516520 MGAT5BQ3V5L5 792 aa3.24□□□□□ -1.89
SCARNA16.2-201ENST00000516520 SERPINA13PQ6UXR4 307 aa3.24□□□□□ -1.89
SCARNA16.2-201ENST00000516520 KRT73Q86Y46 540 aa3.24□□□□□ -1.89
SCARNA16.2-201ENST00000516520 PRSS3P2Q8NHM4 247 aa3.24□□□□□ -1.89
SCARNA16.2-201ENST00000516520 HPS3Q969F9 1004 aa3.24□□□□□ -1.89
SCARNA16.2-201ENST00000516520 C1GALT1C1Q96EU7 318 aa3.24□□□□□ -1.89
SCARNA16.2-201ENST00000516520 RITA1Q96K30 269 aa3.24□□□□□ -1.89
SCARNA16.2-201ENST00000516520 FAM118BQ9BPY3 351 aa3.24□□□□□ -1.89
SCARNA16.2-201ENST00000516520 MACROD1Q9BQ69 325 aa3.24□□□□□ -1.89
SCARNA16.2-201ENST00000516520 THAP7Q9BT49 309 aaPredicted RBP3.24□□□□□ -1.89
SCARNA16.2-201ENST00000516520 DPCDQ9BVM2 203 aaPredicted RBP3.24□□□□□ -1.89
SCARNA16.2-201ENST00000516520 PCDH12Q9NPG4 1184 aa3.24□□□□□ -1.89
SCARNA16.2-201ENST00000516520 ELOVL5Q9NYP7 299 aa3.24□□□□□ -1.89
SCARNA16.2-201ENST00000516520 TFCP2L1Q9NZI6 479 aa3.24□□□□□ -1.89
SCARNA16.2-201ENST00000516520 WDR17Q8IZU2 1322 aa3.23□□□□□ -1.89
SCARNA16.2-201ENST00000516520 E5RJQ4 531 aa3.23□□□□□ -1.89
SCARNA16.2-201ENST00000516520 EXOC3O60645 756 aa3.23□□□□□ -1.89
SCARNA16.2-201ENST00000516520 OFD1O75665 1012 aa3.23□□□□□ -1.89
SCARNA16.2-201ENST00000516520 BCAR3O75815 825 aa3.23□□□□□ -1.89
SCARNA16.2-201ENST00000516520 MYCLP12524 364 aaPredicted RBP3.23□□□□□ -1.89
SCARNA16.2-201ENST00000516520 SFPQP23246 707 aaKnown RBP eCLIP3.23□□□□□ -1.89
SCARNA16.2-201ENST00000516520 SLC11A2P49281 568 aa3.23□□□□□ -1.89
SCARNA16.2-201ENST00000516520 POLGP54098 1239 aaPredicted RBP3.23□□□□□ -1.89
SCARNA16.2-201ENST00000516520 UCP3P55916 312 aa3.23□□□□□ -1.89
SCARNA16.2-201ENST00000516520 KRTAP10-9P60411 292 aa3.23□□□□□ -1.89
SCARNA16.2-201ENST00000516520 FGL2Q14314 439 aa3.23□□□□□ -1.89
SCARNA16.2-201ENST00000516520 C4orf46Q504U0 113 aa3.23□□□□□ -1.89
SCARNA16.2-201ENST00000516520 DEPDC1Q5TB30 811 aa3.23□□□□□ -1.89
SCARNA16.2-201ENST00000516520 FCRL6Q6DN72 434 aa3.23□□□□□ -1.89
SCARNA16.2-201ENST00000516520 MRPL10Q7Z7H8 261 aaKnown RBP3.23□□□□□ -1.89
SCARNA16.2-201ENST00000516520 GAS2L3Q86XJ1 694 aa3.23□□□□□ -1.89
SCARNA16.2-201ENST00000516520 GRAMD1CQ8IYS0 662 aa3.23□□□□□ -1.89
SCARNA16.2-201ENST00000516520 CUL5Q93034 780 aa3.23□□□□□ -1.89
SCARNA16.2-201ENST00000516520 RSPRY1Q96DX4 576 aa3.23□□□□□ -1.89
SCARNA16.2-201ENST00000516520 CGRRF1Q99675 332 aa3.23□□□□□ -1.89
SCARNA16.2-201ENST00000516520 MESP1Q9BRJ9 268 aa3.23□□□□□ -1.89
SCARNA16.2-201ENST00000516520 KRTAP1-5Q9BYS1 174 aa3.23□□□□□ -1.89
SCARNA16.2-201ENST00000516520 CIPCQ9C0C6 399 aa3.23□□□□□ -1.89
SCARNA16.2-201ENST00000516520 CXorf36Q9H7Y0 433 aa3.23□□□□□ -1.89
SCARNA16.2-201ENST00000516520 PDGFCQ9NRA1 345 aa3.23□□□□□ -1.89
SCARNA16.2-201ENST00000516520 PIH1D1Q9NWS0 290 aaKnown RBP3.23□□□□□ -1.89
SCARNA16.2-201ENST00000516520 ANKRD6Q9Y2G4 727 aa3.23□□□□□ -1.89
SCARNA16.2-201ENST00000516520 PAXBP1Q9Y5B6 917 aa3.23□□□□□ -1.89
SCARNA16.2-201ENST00000516520 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.23□□□□□ -1.89
SCARNA16.2-201ENST00000516520 BTBD19C9JJ37 291 aa3.22□□□□□ -1.89
SCARNA16.2-201ENST00000516520 hCG_1984214I3L0E3 225 aa3.22□□□□□ -1.89
SCARNA16.2-201ENST00000516520 TRIM38O00635 465 aa3.22□□□□□ -1.89
SCARNA16.2-201ENST00000516520 CSF1RP07333 972 aa3.22□□□□□ -1.89
SCARNA16.2-201ENST00000516520 CT47B1P0C2W7 299 aaPredicted RBP3.22□□□□□ -1.89
SCARNA16.2-201ENST00000516520 PHKG2P15735 406 aa3.22□□□□□ -1.89
SCARNA16.2-201ENST00000516520 NR4A2P43354 598 aa3.22□□□□□ -1.89
SCARNA16.2-201ENST00000516520 RENBPP51606 427 aa3.22□□□□□ -1.89
SCARNA16.2-201ENST00000516520 NEK2P51955 445 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms