RNA–Protein interactions for RNA: ENST00000515854.5

ATP2C1-223, Transcript of ATPase secretory pathway Ca2+ transporting 1, human

TSL 4

Gene ATP2C1, Length 561 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2C1-223	ENST00000515854	PSMC1	P62191	440 aa	Known RBP	4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	RPL7A	P62424	266 aa	Known RBP	4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	SLC7A5	Q01650	507 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	OGDH	Q02218	1023 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	ZNF252P-AS1	Q0IIN9	211 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	PDCL	Q13371	301 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	ZNF211	Q13398	564 aa	Predicted RBP	4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	PIGH	Q14442	188 aa	Predicted RBP	4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	SIX1	Q15475	284 aa	Predicted RBP	4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	CYP1B1	Q16678	543 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	SV2C	Q496J9	727 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	MAP9	Q49MG5	647 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	ZNF618	Q5T7W0	954 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	SEL1L2	Q5TEA6	688 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	LRRC38	Q5VT99	294 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	PRPF38B	Q5VTL8	546 aa	Known RBP	4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	AADACL2	Q6P093	401 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	DNAJC24	Q6P3W2	148 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	AGMO	Q6ZNB7	445 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	HDX	Q7Z353	690 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	ACOT1	Q86TX2	421 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	XYLT1	Q86Y38	959 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	SLC13A5	Q86YT5	568 aa	Predicted RBP	4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	RHOT1	Q8IXI2	618 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	KLHL7	Q8IXQ5	586 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	IFT20	Q8IY31	132 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	KATNAL2	Q8IYT4	538 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	ZDHHC14	Q8IZN3	488 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854		Q8N3U1	123 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	TOP6BL	Q8N6T0	577 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	NIPA2	Q8N8Q9	360 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	PRELID2	Q8N945	189 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	EIF1AD	Q8N9N8	165 aa	Known RBP	4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	C12orf50	Q8NA57	414 aa	Predicted RBP	4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	ZNF784	Q8NCA9	323 aa	Predicted RBP	4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	OR6B3	Q8NGW1	331 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	CCDC26	Q8TAB7	109 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	FNIP1	Q8TF40	1166 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	AEN	Q8WTP8	325 aa	Known RBP	4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	STK32A	Q8WU08	396 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	ZNF296	Q8WUU4	475 aa	Predicted RBP	4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	KBTBD7	Q8WVZ9	684 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	SEC14L1	Q92503	715 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	C18orf8	Q96DM3	657 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	MCRS1	Q96EZ8	462 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	GLT1D1	Q96MS3	346 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	CPXM1	Q96SM3	734 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	PLVAP	Q9BX97	442 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	SEZ6L	Q9BYH1	1024 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	UBXN6	Q9BZV1	441 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	DNAI2	Q9GZS0	605 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	MIS12	Q9H081	205 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	GOLGA2P5	Q9HBQ8	144 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	UBN1	Q9NPG3	1134 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	TRMT13	Q9NUP7	481 aa	Known RBP	4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	SLC38A7	Q9NVC3	462 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	MIOS	Q9NXC5	875 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	OGFR	Q9NZT2	677 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	TJP2	Q9UDY2	1190 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	RABGEF1	Q9UJ41	708 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	TSPAN16	Q9UKR8	245 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	PHF24	Q9UPV7	400 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	NOD1	Q9Y239	953 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	NR2E1	Q9Y466	385 aa		4.74	□□□□□ -1.65
ATP2C1-223	ENST00000515854	GOLGA6L10	A0A0M3HER8	536 aa		4.73	□□□□□ -1.65
ATP2C1-223	ENST00000515854		A0A0U1RQG5	324 aa	Predicted RBP	4.73	□□□□□ -1.65
ATP2C1-223	ENST00000515854		A0A1W2PQ45	241 aa	Predicted RBP	4.73	□□□□□ -1.65
ATP2C1-223	ENST00000515854		A0A1W2PQY0	241 aa		4.73	□□□□□ -1.65
ATP2C1-223	ENST00000515854	TCRBV7S2A1N4T	A0A589	114 aa		4.73	□□□□□ -1.65
ATP2C1-223	ENST00000515854	ARL5C	A6NH57	179 aa		4.73	□□□□□ -1.65
ATP2C1-223	ENST00000515854		A8MXQ7	604 aa		4.73	□□□□□ -1.65
ATP2C1-223	ENST00000515854		F8VP50	259 aa		4.73	□□□□□ -1.65
ATP2C1-223	ENST00000515854	ARVCF	O00192	962 aa		4.73	□□□□□ -1.65
ATP2C1-223	ENST00000515854	GABRD	O14764	452 aa		4.73	□□□□□ -1.65
ATP2C1-223	ENST00000515854	HUS1	O60921	280 aa		4.73	□□□□□ -1.65
ATP2C1-223	ENST00000515854	PHF2	O75151	1096 aa		4.73	□□□□□ -1.65
ATP2C1-223	ENST00000515854	TH	P07101	528 aa		4.73	□□□□□ -1.65
ATP2C1-223	ENST00000515854	RARA	P10276	462 aa		4.73	□□□□□ -1.65
ATP2C1-223	ENST00000515854	KRT3	P12035	628 aa		4.73	□□□□□ -1.65
ATP2C1-223	ENST00000515854	CKB	P12277	381 aa		4.73	□□□□□ -1.65
ATP2C1-223	ENST00000515854	PAX3	P23760	479 aa		4.73	□□□□□ -1.65
ATP2C1-223	ENST00000515854	LMO2	P25791	158 aa		4.73	□□□□□ -1.65
ATP2C1-223	ENST00000515854	CHRNA3	P32297	505 aa		4.73	□□□□□ -1.65
ATP2C1-223	ENST00000515854	RPL9	P32969	192 aa	Known RBP	4.73	□□□□□ -1.65
ATP2C1-223	ENST00000515854	RFC1	P35251	1148 aa	Predicted RBP	4.73	□□□□□ -1.65
ATP2C1-223	ENST00000515854	GNL1	P36915	607 aa	Predicted RBP	4.73	□□□□□ -1.65
ATP2C1-223	ENST00000515854	MLH1	P40692	756 aa		4.73	□□□□□ -1.65
ATP2C1-223	ENST00000515854	PTGIR	P43119	386 aa		4.73	□□□□□ -1.65
ATP2C1-223	ENST00000515854	PLA2G4A	P47712	749 aa		4.73	□□□□□ -1.65
ATP2C1-223	ENST00000515854	RPL34	P49207	117 aa	Known RBP	4.73	□□□□□ -1.65
ATP2C1-223	ENST00000515854	AARS	P49588	968 aa	Known RBP eCLIP	4.73	□□□□□ -1.65	1e-6	■■■■■ 36.1
ATP2C1-223	ENST00000515854	CARS	P49589	748 aa	Known RBP	4.73	□□□□□ -1.65
ATP2C1-223	ENST00000515854	CDK7	P50613	346 aa		4.73	□□□□□ -1.65
ATP2C1-223	ENST00000515854	AFF1	P51825	1210 aa	Known RBP	4.73	□□□□□ -1.65
ATP2C1-223	ENST00000515854	EPHB4	P54760	987 aa		4.73	□□□□□ -1.65
ATP2C1-223	ENST00000515854	COPS2	P61201	443 aa		4.73	□□□□□ -1.65
ATP2C1-223	ENST00000515854	MRPS25	P82663	173 aa	Known RBP	4.73	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms