RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 ITGB6P18564 788 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 SHROOM1Q2M3G4 852 aaPredicted RBP11.44□□□□□ -0.58
TRIM41-209ENST00000515834 USP39Q53GS9 565 aaKnown RBP11.44□□□□□ -0.58
TRIM41-209ENST00000515834 LLGL2Q6P1M3 1020 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 LUZP2Q86TE4 346 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 AGBL3Q8NEM8 1001 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 VPS50Q96JG6 964 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 RBM15Q96T37 977 aaKnown RBP eCLIP11.44□□□□□ -0.58
TRIM41-209ENST00000515834 GOLPH3Q9H4A6 298 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 TMEM8AQ9HCN3 771 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 NMRK1Q9NWW6 199 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 SMPD4Q9NXE4 827 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 KLF15Q9UIH9 416 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 FAM205CA6NFA0 338 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 TCP11X1B4DZS4 312 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 ZW10O43264 779 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 CST8O60676 142 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 APOA1P02647 267 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 GCLCP48506 637 aaPredicted RBP11.44□□□□□ -0.58
TRIM41-209ENST00000515834 RALGDSQ12967 914 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 TRIP4Q15650 581 aaPredicted RBP11.44□□□□□ -0.58
TRIM41-209ENST00000515834 PPM1LQ5SGD2 360 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 NT5DC3Q86UY8 548 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 SPIRE2Q8WWL2 714 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 MIR1-1HGQ9H1L0 117 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 KRT84Q9NSB2 600 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 SPATS2LQ9NUQ6 558 aaKnown RBP11.44□□□□□ -0.58
TRIM41-209ENST00000515834 DBR1Q9UK59 544 aaKnown RBP11.44□□□□□ -0.58
TRIM41-209ENST00000515834 TIMM13Q9Y5L4 95 aaPredicted RBP11.44□□□□□ -0.58
TRIM41-209ENST00000515834 NR2E3Q9Y5X4 410 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 MRPL42Q9Y6G3 142 aaKnown RBP11.44□□□□□ -0.58
TRIM41-209ENST00000515834 CSDE1O75534 798 aaKnown RBP11.44□□□□□ -0.58
TRIM41-209ENST00000515834 STAU1O95793 577 aaKnown RBP11.44□□□□□ -0.58
TRIM41-209ENST00000515834 GSTM1P09488 218 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 C3orf62Q6ZUJ4 267 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 B3GALNT2Q8NCR0 500 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 KLF6Q99612 283 aaPredicted RBP11.44□□□□□ -0.58
TRIM41-209ENST00000515834 PAK5Q9P286 719 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 SNX8Q9Y5X2 465 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 CNTNAP2Q9UHC6 1331 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 PRKAA1Q13131 559 aa11.43□□□□□ -0.58
TRIM41-209ENST00000515834 BYSLQ13895 437 aaKnown RBP11.43□□□□□ -0.58
TRIM41-209ENST00000515834 STAT4Q14765 748 aa11.43□□□□□ -0.58
TRIM41-209ENST00000515834 ZNF280DQ6N043 979 aa11.43□□□□□ -0.58
TRIM41-209ENST00000515834 OSMRQ99650 979 aa11.43□□□□□ -0.58
TRIM41-209ENST00000515834 ECSITQ9BQ95 431 aa11.43□□□□□ -0.58
TRIM41-209ENST00000515834 MTMR12Q9C0I1 747 aa11.43□□□□□ -0.58
TRIM41-209ENST00000515834 SPATA31A1Q5TZJ5 1347 aa11.43□□□□□ -0.58
TRIM41-209ENST00000515834 ZNF185O15231 689 aa11.43□□□□□ -0.58
TRIM41-209ENST00000515834 GALCP54803 685 aa11.43□□□□□ -0.58
TRIM41-209ENST00000515834 MROH9Q5TGP6 573 aa11.43□□□□□ -0.58
TRIM41-209ENST00000515834 NBPF15Q8N660 670 aa11.43□□□□□ -0.58
TRIM41-209ENST00000515834 PCYOX1LQ8NBM8 494 aa11.43□□□□□ -0.58
TRIM41-209ENST00000515834 C9orf72Q96LT7 481 aa11.43□□□□□ -0.58
TRIM41-209ENST00000515834 FAM167BQ9BTA0 163 aa11.43□□□□□ -0.58
TRIM41-209ENST00000515834 THUMPD3Q9BV44 507 aaKnown RBP11.43□□□□□ -0.58
TRIM41-209ENST00000515834 GID8Q9NWU2 228 aa11.43□□□□□ -0.58
TRIM41-209ENST00000515834 PNPLA7Q6ZV29 1317 aa11.43□□□□□ -0.58
TRIM41-209ENST00000515834 GNG14A0A1W2PPG7 69 aa11.43□□□□□ -0.58
TRIM41-209ENST00000515834 GMNCA6NCL1 334 aa11.43□□□□□ -0.58
TRIM41-209ENST00000515834 STRNO43815 780 aa11.43□□□□□ -0.58
TRIM41-209ENST00000515834 ANXA9O76027 345 aa11.43□□□□□ -0.58
TRIM41-209ENST00000515834 HSPA9P38646 679 aaKnown RBP11.43□□□□□ -0.58
TRIM41-209ENST00000515834 ACOX1Q15067 660 aa11.43□□□□□ -0.58
TRIM41-209ENST00000515834 CNGA3Q16281 694 aa11.43□□□□□ -0.58
TRIM41-209ENST00000515834 WDR19Q8NEZ3 1342 aa11.43□□□□□ -0.58
TRIM41-209ENST00000515834 CAMTA2O94983 1202 aa11.43□□□□□ -0.58
TRIM41-209ENST00000515834 RCAN1P53805 252 aa11.43□□□□□ -0.58
TRIM41-209ENST00000515834 NME5P56597 212 aa11.43□□□□□ -0.58
TRIM41-209ENST00000515834 DEPDC7Q96QD5 511 aa11.43□□□□□ -0.58
TRIM41-209ENST00000515834 RSAD1Q9HA92 442 aa11.43□□□□□ -0.58
TRIM41-209ENST00000515834 SETD4Q9NVD3 440 aa11.43□□□□□ -0.58
TRIM41-209ENST00000515834 HLA-DQA1Q5Y7H0 255 aa11.43□□□□□ -0.58
TRIM41-209ENST00000515834 CLYBLQ8N0X4 340 aa11.43□□□□□ -0.58
TRIM41-209ENST00000515834 GALNT4Q8N4A0 578 aa11.43□□□□□ -0.58
TRIM41-209ENST00000515834 TRIM10Q9UDY6 481 aa11.43□□□□□ -0.58
TRIM41-209ENST00000515834 KLRC1P26715 233 aa11.43□□□□□ -0.58
TRIM41-209ENST00000515834 SERPINB9P50453 376 aa11.43□□□□□ -0.58
TRIM41-209ENST00000515834 TTC39BQ5VTQ0 682 aaPredicted RBP11.43□□□□□ -0.58
TRIM41-209ENST00000515834 ARHGAP17Q68EM7 881 aa11.43□□□□□ -0.58
TRIM41-209ENST00000515834 DTX3LQ8TDB6 740 aa11.43□□□□□ -0.58
TRIM41-209ENST00000515834 DNAJB3Q8WWF6 145 aa11.43□□□□□ -0.58
TRIM41-209ENST00000515834 SERAC1Q96JX3 654 aa11.43□□□□□ -0.58
TRIM41-209ENST00000515834 CLPBQ9H078 707 aa11.43□□□□□ -0.58
TRIM41-209ENST00000515834 JMJD4Q9H9V9 463 aa11.43□□□□□ -0.58
TRIM41-209ENST00000515834 EIF3LQ9Y262 564 aaKnown RBP11.43□□□□□ -0.58
TRIM41-209ENST00000515834 hCG_2014768A0A024R1R8 64 aa11.42□□□□□ -0.58
TRIM41-209ENST00000515834 CHGBP05060 677 aa11.42□□□□□ -0.58
TRIM41-209ENST00000515834 CTSEP14091 401 aa11.42□□□□□ -0.58
TRIM41-209ENST00000515834 ZNF484Q5JVG2 852 aa11.42□□□□□ -0.58
TRIM41-209ENST00000515834 CCDC81Q6ZN84 652 aa11.42□□□□□ -0.58
TRIM41-209ENST00000515834 LINC00523Q86TU6 105 aa11.42□□□□□ -0.58
TRIM41-209ENST00000515834 MYO1HQ8N1T3 1032 aa11.42□□□□□ -0.58
TRIM41-209ENST00000515834 UBXN6Q9BZV1 441 aa11.42□□□□□ -0.58
TRIM41-209ENST00000515834 RSPH9Q9H1X1 276 aaPredicted RBP11.42□□□□□ -0.58
TRIM41-209ENST00000515834 TRPC4Q9UBN4 977 aa11.42□□□□□ -0.58
TRIM41-209ENST00000515834 HECW2Q9P2P5 1572 aa11.42□□□□□ -0.58
TRIM41-209ENST00000515834 PHF2O75151 1096 aa11.42□□□□□ -0.58
TRIM41-209ENST00000515834 KRT16P08779 473 aa11.42□□□□□ -0.58
TRIM41-209ENST00000515834 ANXA11P50995 505 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms