RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 VWC2LB2RUY7 222 aa4.02□□□□□ -1.77
HERC4-215ENST00000515753 GCOM1H8Y6P7 765 aaPredicted RBP4.02□□□□□ -1.77
HERC4-215ENST00000515753 XRCC6P12956 609 aaKnown RBP eCLIP4.02□□□□□ -1.77
HERC4-215ENST00000515753 PCSK6P29122 969 aa4.02□□□□□ -1.77
HERC4-215ENST00000515753 KCNJ5P48544 419 aa4.02□□□□□ -1.77
HERC4-215ENST00000515753 SLC11A2P49281 568 aa4.02□□□□□ -1.77
HERC4-215ENST00000515753 HNRNPMP52272 730 aaKnown RBP eCLIP4.02□□□□□ -1.77
HERC4-215ENST00000515753 ZNF134P52741 427 aa4.02□□□□□ -1.77
HERC4-215ENST00000515753 CACNB3P54284 484 aa4.02□□□□□ -1.77
HERC4-215ENST00000515753 SOX10P56693 466 aa4.02□□□□□ -1.77
HERC4-215ENST00000515753 EIF2B5Q13144 721 aaKnown RBP4.02□□□□□ -1.77
HERC4-215ENST00000515753 IQCB1Q15051 598 aa4.02□□□□□ -1.77
HERC4-215ENST00000515753 GFOD2Q3B7J2 385 aa4.02□□□□□ -1.77
HERC4-215ENST00000515753 AMOTQ4VCS5 1084 aa4.02□□□□□ -1.77
HERC4-215ENST00000515753 RBM20Q5T481 1227 aaKnown RBP4.02□□□□□ -1.77
HERC4-215ENST00000515753 KIAA1614Q5VZ46 1190 aa4.02□□□□□ -1.77
HERC4-215ENST00000515753 ZNF626Q68DY1 528 aa4.02□□□□□ -1.77
HERC4-215ENST00000515753 CYB5RLQ6IPT4 315 aa4.02□□□□□ -1.77
HERC4-215ENST00000515753 ZNF783Q6ZMS7 281 aa4.02□□□□□ -1.77
HERC4-215ENST00000515753 ZNF782Q6ZMW2 699 aaPredicted RBP4.02□□□□□ -1.77
HERC4-215ENST00000515753 DTX2Q86UW9 622 aa4.02□□□□□ -1.77
HERC4-215ENST00000515753 SLC46A1Q96NT5 459 aa4.02□□□□□ -1.77
HERC4-215ENST00000515753 MESP1Q9BRJ9 268 aa4.02□□□□□ -1.77
HERC4-215ENST00000515753 PTDSS2Q9BVG9 487 aa4.02□□□□□ -1.77
HERC4-215ENST00000515753 ARMT1Q9H993 441 aa4.02□□□□□ -1.77
HERC4-215ENST00000515753 PRDM11Q9NQV5 511 aa4.02□□□□□ -1.77
HERC4-215ENST00000515753 G3BP2Q9UN86 482 aaKnown RBP4.02□□□□□ -1.77
HERC4-215ENST00000515753 SHOC2Q9UQ13 582 aa4.02□□□□□ -1.77
HERC4-215ENST00000515753 LOC102724159A0A0B4J2E5 919 aa4.01□□□□□ -1.77
HERC4-215ENST00000515753 A6NNZ2 444 aa4.01□□□□□ -1.77
HERC4-215ENST00000515753 F5H697 171 aa4.01□□□□□ -1.77
HERC4-215ENST00000515753 URI1O94763 535 aaPredicted RBP4.01□□□□□ -1.77
HERC4-215ENST00000515753 NXPH3O95157 252 aa4.01□□□□□ -1.77
HERC4-215ENST00000515753 PRR35P0CG20 571 aa4.01□□□□□ -1.77
HERC4-215ENST00000515753 LRPAP1P30533 357 aa4.01□□□□□ -1.77
HERC4-215ENST00000515753 TBX4P57082 545 aa4.01□□□□□ -1.77
HERC4-215ENST00000515753 TFF2Q03403 129 aa4.01□□□□□ -1.77
HERC4-215ENST00000515753 GRM1Q13255 1194 aa4.01□□□□□ -1.77
HERC4-215ENST00000515753 KLF9Q13886 244 aaPredicted RBP4.01□□□□□ -1.77
HERC4-215ENST00000515753 PWP2Q15269 919 aaKnown RBP4.01□□□□□ -1.77
HERC4-215ENST00000515753 FAM153CQ494X1 144 aa4.01□□□□□ -1.77
HERC4-215ENST00000515753 ZNF618Q5T7W0 954 aa4.01□□□□□ -1.77
HERC4-215ENST00000515753 ICE2Q659A1 982 aa4.01□□□□□ -1.77
HERC4-215ENST00000515753 LMBRD2Q68DH5 695 aaPredicted RBP4.01□□□□□ -1.77
HERC4-215ENST00000515753 APOA5Q6Q788 366 aa4.01□□□□□ -1.77
HERC4-215ENST00000515753 TMEM108Q6UXF1 575 aa4.01□□□□□ -1.77
HERC4-215ENST00000515753 SLC30A10Q6XR72 485 aa4.01□□□□□ -1.77
HERC4-215ENST00000515753 FMNL3Q8IVF7 1028 aa4.01□□□□□ -1.77
HERC4-215ENST00000515753 OR6B3Q8NGW1 331 aa4.01□□□□□ -1.77
HERC4-215ENST00000515753 MORC4Q8TE76 937 aa4.01□□□□□ -1.77
HERC4-215ENST00000515753 ATRIPQ8WXE1 791 aa4.01□□□□□ -1.77
HERC4-215ENST00000515753 RFKQ969G6 155 aa4.01□□□□□ -1.77
HERC4-215ENST00000515753 FKBP10Q96AY3 582 aa4.01□□□□□ -1.77
HERC4-215ENST00000515753 C8orf48Q96LL4 319 aa4.01□□□□□ -1.77
HERC4-215ENST00000515753 NT5C1BQ96P26 610 aa4.01□□□□□ -1.77
HERC4-215ENST00000515753 P2RX7Q99572 595 aaKnown RBP4.01□□□□□ -1.77
HERC4-215ENST00000515753 ACTRT3Q9BYD9 372 aa4.01□□□□□ -1.77
HERC4-215ENST00000515753 SMURF2Q9HAU4 748 aa4.01□□□□□ -1.77
HERC4-215ENST00000515753 EHD3Q9NZN3 535 aa4.01□□□□□ -1.77
HERC4-215ENST00000515753 XPR1Q9UBH6 696 aa4.01□□□□□ -1.77
HERC4-215ENST00000515753 STAP2Q9UGK3 403 aa4.01□□□□□ -1.77
HERC4-215ENST00000515753 CPA4Q9UI42 421 aa4.01□□□□□ -1.77
HERC4-215ENST00000515753 ZNF804BA4D1E1 1349 aa4□□□□□ -1.77
HERC4-215ENST00000515753 MBD3L4A6NDZ8 208 aaPredicted RBP4□□□□□ -1.77
HERC4-215ENST00000515753 MBD3L3A6NE82 208 aaPredicted RBP4□□□□□ -1.77
HERC4-215ENST00000515753 TBX3O15119 743 aa4□□□□□ -1.77
HERC4-215ENST00000515753 PRC1O43663 620 aa4□□□□□ -1.77
HERC4-215ENST00000515753 TLR5O60602 858 aa4□□□□□ -1.77
HERC4-215ENST00000515753 VPS4BO75351 444 aa4□□□□□ -1.77
HERC4-215ENST00000515753 CHRM3P20309 590 aa4□□□□□ -1.77
HERC4-215ENST00000515753 PXNP49023 591 aaPredicted RBP4□□□□□ -1.77
HERC4-215ENST00000515753 UCP3P55916 312 aa4□□□□□ -1.77
HERC4-215ENST00000515753 FAM193AP78312 1265 aa4□□□□□ -1.77
HERC4-215ENST00000515753 RAB32Q13637 225 aa4□□□□□ -1.77
HERC4-215ENST00000515753 POLD3Q15054 466 aaPredicted RBP4□□□□□ -1.77
HERC4-215ENST00000515753 LLGL1Q15334 1064 aa4□□□□□ -1.77
HERC4-215ENST00000515753 CNN3Q15417 329 aaKnown RBP4□□□□□ -1.77
HERC4-215ENST00000515753 ETFDHQ16134 617 aa4□□□□□ -1.77
HERC4-215ENST00000515753 VPS53Q5VIR6 699 aa4□□□□□ -1.77
HERC4-215ENST00000515753 C11orf87Q6NUJ2 197 aa4□□□□□ -1.77
HERC4-215ENST00000515753 CCDC146Q8IYE0 955 aa4□□□□□ -1.77
HERC4-215ENST00000515753 EXOC8Q8IYI6 725 aa4□□□□□ -1.77
HERC4-215ENST00000515753 TTC8Q8TAM2 541 aa4□□□□□ -1.77
HERC4-215ENST00000515753 MAML1Q92585 1016 aa4□□□□□ -1.77
HERC4-215ENST00000515753 NMD3Q96D46 503 aaKnown RBP4□□□□□ -1.77
HERC4-215ENST00000515753 MSLNLQ96KJ4 702 aa4□□□□□ -1.77
HERC4-215ENST00000515753 KRTAP1-5Q9BYS1 174 aa4□□□□□ -1.77
HERC4-215ENST00000515753 TPSD1Q9BZJ3 242 aa4□□□□□ -1.77
HERC4-215ENST00000515753 OBP2AQ9NY56 170 aa4□□□□□ -1.77
HERC4-215ENST00000515753 FLRT1Q9NZU1 646 aa4□□□□□ -1.77
HERC4-215ENST00000515753 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4□□□□□ -1.77
HERC4-215ENST00000515753 PADI4Q9UM07 663 aa4□□□□□ -1.77
HERC4-215ENST00000515753 TMX2Q9Y320 296 aa4□□□□□ -1.77
HERC4-215ENST00000515753 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4□□□□□ -1.77
HERC4-215ENST00000515753 TRIM43BA6NCK2 446 aa3.99□□□□□ -1.77
HERC4-215ENST00000515753 LINC01548A6NM66 108 aa3.99□□□□□ -1.77
HERC4-215ENST00000515753 VSTM5A8MXK1 200 aa3.99□□□□□ -1.77
HERC4-215ENST00000515753 BTN3A1O00481 513 aa3.99□□□□□ -1.77
HERC4-215ENST00000515753 TPP1O14773 563 aa3.99□□□□□ -1.77
HERC4-215ENST00000515753 SLC16A3O15427 465 aaKnown RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms