RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 NPR3P17342 541 aa22.22■■□□□ 1.15
LSM6-207ENST00000515311 CHRNB2P17787 502 aa22.22■■□□□ 1.15
LSM6-207ENST00000515311 FECHP22830 423 aa22.22■■□□□ 1.15
LSM6-207ENST00000515311 BDNFP23560 247 aa22.22■■□□□ 1.15
LSM6-207ENST00000515311 CYP2F1P24903 491 aa22.22■■□□□ 1.15
LSM6-207ENST00000515311 ANXA13P27216 316 aa22.22■■□□□ 1.15
LSM6-207ENST00000515311 ELF1P32519 619 aa22.22■■□□□ 1.15
LSM6-207ENST00000515311 NRIP1P48552 1158 aa22.22■■□□□ 1.15
LSM6-207ENST00000515311 TUFMP49411 452 aaKnown RBP22.22■■□□□ 1.15
LSM6-207ENST00000515311 SLC8A3P57103 927 aa22.22■■□□□ 1.15
LSM6-207ENST00000515311 DUSP4Q13115 394 aa22.22■■□□□ 1.15
LSM6-207ENST00000515311 ADGRE1Q14246 886 aa22.22■■□□□ 1.15
LSM6-207ENST00000515311 TDRD12Q587J7 1177 aaKnown RBP22.22■■□□□ 1.15
LSM6-207ENST00000515311 ELMSAN1Q6PJG2 1045 aa22.22■■□□□ 1.15
LSM6-207ENST00000515311 TRIM72Q6ZMU5 477 aa22.22■■□□□ 1.15
LSM6-207ENST00000515311 TTC30AQ86WT1 665 aa22.22■■□□□ 1.15
LSM6-207ENST00000515311 GAS2L1Q99501 681 aaPredicted RBP22.22■■□□□ 1.15
LSM6-207ENST00000515311 AGPAT1Q99943 283 aa22.22■■□□□ 1.15
LSM6-207ENST00000515311 DUSP16Q9BY84 665 aa22.22■■□□□ 1.15
LSM6-207ENST00000515311 RHOBTB2Q9BYZ6 727 aa22.22■■□□□ 1.15
LSM6-207ENST00000515311 CRISPLD1Q9H336 500 aa22.22■■□□□ 1.15
LSM6-207ENST00000515311 PLEKHA4Q9H4M7 779 aa22.22■■□□□ 1.15
LSM6-207ENST00000515311 DMAP1Q9NPF5 467 aaPredicted RBP22.22■■□□□ 1.15
LSM6-207ENST00000515311 ARHGAP20Q9P2F6 1191 aa22.22■■□□□ 1.15
LSM6-207ENST00000515311 M0QYV0 167 aa22.21■■□□□ 1.15
LSM6-207ENST00000515311 PRRG1O14668 218 aa22.21■■□□□ 1.15
LSM6-207ENST00000515311 PER2O15055 1255 aa22.21■■□□□ 1.15
LSM6-207ENST00000515311 SEC24AO95486 1093 aa22.21■■□□□ 1.15
LSM6-207ENST00000515311 MMEP08473 750 aa22.21■■□□□ 1.15
LSM6-207ENST00000515311 SKILP12757 684 aa22.21■■□□□ 1.15
LSM6-207ENST00000515311 FMO1Q01740 532 aa22.21■■□□□ 1.15
LSM6-207ENST00000515311 BST2Q10589 180 aaKnown RBP22.21■■□□□ 1.15
LSM6-207ENST00000515311 TCEAL5Q5H9L2 206 aa22.21■■□□□ 1.15
LSM6-207ENST00000515311 TAF3Q5VWG9 929 aa22.21■■□□□ 1.15
LSM6-207ENST00000515311 CCDC149Q6ZUS6 474 aa22.21■■□□□ 1.15
LSM6-207ENST00000515311 ZNF571Q7Z3V5 609 aaPredicted RBP22.21■■□□□ 1.15
LSM6-207ENST00000515311 RBM23Q86U06 439 aaKnown RBP22.21■■□□□ 1.15
LSM6-207ENST00000515311 TTC9BQ8N6N2 239 aa22.21■■□□□ 1.15
LSM6-207ENST00000515311 KREMEN2Q8NCW0 462 aa22.21■■□□□ 1.15
LSM6-207ENST00000515311 CEP295NLQ96MC4 621 aa22.21■■□□□ 1.15
LSM6-207ENST00000515311 FAM161BQ96MY7 647 aa22.21■■□□□ 1.15
LSM6-207ENST00000515311 CYP4F11Q9HBI6 524 aa22.21■■□□□ 1.15
LSM6-207ENST00000515311 CEP83Q9Y592 693 aa22.21■■□□□ 1.15
LSM6-207ENST00000515311 HCFC2Q9Y5Z7 792 aa22.21■■□□□ 1.15
LSM6-207ENST00000515311 PRRC2BQ5JSZ5 2229 aaKnown RBP22.21■■□□□ 1.15
LSM6-207ENST00000515311 TRIM66O15016 1216 aa22.2■■□□□ 1.14
LSM6-207ENST00000515311 CFHP08603 1231 aa22.2■■□□□ 1.14
LSM6-207ENST00000515311 CDH5P33151 784 aaPredicted RBP22.2■■□□□ 1.14
LSM6-207ENST00000515311 CDR1P51861 262 aa22.2■■□□□ 1.14
LSM6-207ENST00000515311 RPL10AP62906 217 aaKnown RBP22.2■■□□□ 1.14
LSM6-207ENST00000515311 KCNC3Q14003 757 aa22.2■■□□□ 1.14
LSM6-207ENST00000515311 LIN9Q5TKA1 542 aa22.2■■□□□ 1.14
LSM6-207ENST00000515311 DENND1BQ6P3S1 775 aa22.2■■□□□ 1.14
LSM6-207ENST00000515311 CLEC20AQ6ZU45 233 aa22.2■■□□□ 1.14
LSM6-207ENST00000515311 CCDC186Q7Z3E2 898 aa22.2■■□□□ 1.14
LSM6-207ENST00000515311 VPS36Q86VN1 386 aa22.2■■□□□ 1.14
LSM6-207ENST00000515311 OLIG1Q8TAK6 271 aa22.2■■□□□ 1.14
LSM6-207ENST00000515311 C8orf48Q96LL4 319 aa22.2■■□□□ 1.14
LSM6-207ENST00000515311 SEPT5Q99719 369 aaPredicted RBP22.2■■□□□ 1.14
LSM6-207ENST00000515311 UBXN6Q9BZV1 441 aa22.2■■□□□ 1.14
LSM6-207ENST00000515311 PDCL3Q9H2J4 239 aa22.2■■□□□ 1.14
LSM6-207ENST00000515311 PNPLA8Q9NP80 782 aa22.2■■□□□ 1.14
LSM6-207ENST00000515311 TMEM30AQ9NV96 361 aa22.2■■□□□ 1.14
LSM6-207ENST00000515311 SLC27A5Q9Y2P5 690 aa22.2■■□□□ 1.14
LSM6-207ENST00000515311 SSU72P8A0A1W2PR75 194 aa22.19■■□□□ 1.14
LSM6-207ENST00000515311 XPO1O14980 1071 aaKnown RBP22.19■■□□□ 1.14
LSM6-207ENST00000515311 SPATA31D3P0C874 917 aa22.19■■□□□ 1.14
LSM6-207ENST00000515311 EPCAMP16422 314 aa22.19■■□□□ 1.14
LSM6-207ENST00000515311 GRIK1P39086 918 aa22.19■■□□□ 1.14
LSM6-207ENST00000515311 CACNA2D1P54289 1103 aa22.19■■□□□ 1.14
LSM6-207ENST00000515311 CCDC173Q0VFZ6 552 aa22.19■■□□□ 1.14
LSM6-207ENST00000515311 HYAL1Q12794 435 aa22.19■■□□□ 1.14
LSM6-207ENST00000515311 MGAT5BQ3V5L5 792 aa22.19■■□□□ 1.14
LSM6-207ENST00000515311 SPATA31D4Q6ZUB0 917 aa22.19■■□□□ 1.14
LSM6-207ENST00000515311 EFHBQ8N7U6 833 aa22.19■■□□□ 1.14
LSM6-207ENST00000515311 UBA3Q8TBC4 463 aa22.19■■□□□ 1.14
LSM6-207ENST00000515311 STK32AQ8WU08 396 aa22.19■■□□□ 1.14
LSM6-207ENST00000515311 SLC35F5Q8WV83 523 aa22.19■■□□□ 1.14
LSM6-207ENST00000515311 SECISBP2LQ93073 1101 aaKnown RBP22.19■■□□□ 1.14
LSM6-207ENST00000515311 SMOQ99835 787 aa22.19■■□□□ 1.14
LSM6-207ENST00000515311 MAN1C1Q9NR34 630 aa22.19■■□□□ 1.14
LSM6-207ENST00000515311 YIPF1Q9Y548 306 aa22.19■■□□□ 1.14
LSM6-207ENST00000515311 INSL5Q9Y5Q6 135 aa22.19■■□□□ 1.14
LSM6-207ENST00000515311 F8VP50 259 aa22.18■■□□□ 1.14
LSM6-207ENST00000515311 C8AP07357 584 aa22.18■■□□□ 1.14
LSM6-207ENST00000515311 PLEKP08567 350 aaPredicted RBP22.18■■□□□ 1.14
LSM6-207ENST00000515311 TNFAIP3P21580 790 aa22.18■■□□□ 1.14
LSM6-207ENST00000515311 SSTR3P32745 418 aaPredicted RBP22.18■■□□□ 1.14
LSM6-207ENST00000515311 GPD2P43304 727 aa22.18■■□□□ 1.14
LSM6-207ENST00000515311 PLA2G4AP47712 749 aa22.18■■□□□ 1.14
LSM6-207ENST00000515311 MAP3K7CLP57077 242 aa22.18■■□□□ 1.14
LSM6-207ENST00000515311 PDE4CQ08493 712 aa22.18■■□□□ 1.14
LSM6-207ENST00000515311 PLD1Q13393 1074 aa22.18■■□□□ 1.14
LSM6-207ENST00000515311 CYP26C1Q6V0L0 522 aa22.18■■□□□ 1.14
LSM6-207ENST00000515311 TMEM184AQ6ZMB5 413 aa22.18■■□□□ 1.14
LSM6-207ENST00000515311 PASD1Q8IV76 773 aa22.18■■□□□ 1.14
LSM6-207ENST00000515311 DEFB123Q8N688 67 aa22.18■■□□□ 1.14
LSM6-207ENST00000515311 TMEM35BQ8NCS4 154 aa22.18■■□□□ 1.14
LSM6-207ENST00000515311 ZMIZ2Q8NF64 920 aa22.18■■□□□ 1.14
LSM6-207ENST00000515311 SLC7A14Q8TBB6 771 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms