RNA–Protein interactions for RNA: ENST00000515160.5

CAST-243, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 617 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-243ENST00000515160 CCDC88AQ3V6T2 1871 aa6.51□□□□□ -1.37
CAST-243ENST00000515160 ITIH6Q6UXX5 1313 aa6.5□□□□□ -1.37
CAST-243ENST00000515160 TIAM2Q8IVF5 1701 aa6.5□□□□□ -1.37
CAST-243ENST00000515160 KTN1Q86UP2 1357 aaKnown RBP6.5□□□□□ -1.37
CAST-243ENST00000515160 MBD3L4A6NDZ8 208 aaPredicted RBP6.5□□□□□ -1.37
CAST-243ENST00000515160 MBD3L3A6NE82 208 aaPredicted RBP6.5□□□□□ -1.37
CAST-243ENST00000515160 IPO5O00410 1097 aaKnown RBP6.5□□□□□ -1.37
CAST-243ENST00000515160 GRM6O15303 877 aa6.5□□□□□ -1.37
CAST-243ENST00000515160 TIMM44O43615 452 aa6.5□□□□□ -1.37
CAST-243ENST00000515160 KLHL18O94889 574 aa6.5□□□□□ -1.37
CAST-243ENST00000515160 NDST3O95803 873 aa6.5□□□□□ -1.37
CAST-243ENST00000515160 HSPA8P11142 646 aaKnown RBP6.5□□□□□ -1.37
CAST-243ENST00000515160 MTHFD1P11586 935 aaKnown RBP6.5□□□□□ -1.37
CAST-243ENST00000515160 KLRC1P26715 233 aa6.5□□□□□ -1.37
CAST-243ENST00000515160 MC3RP41968 323 aa6.5□□□□□ -1.37
CAST-243ENST00000515160 KIR2DL3P43628 341 aa6.5□□□□□ -1.37
CAST-243ENST00000515160 PHKA1P46020 1223 aa6.5□□□□□ -1.37
CAST-243ENST00000515160 RXRGP48443 463 aa6.5□□□□□ -1.37
CAST-243ENST00000515160 LBX1P52954 281 aa6.5□□□□□ -1.37
CAST-243ENST00000515160 FOXO4P98177 505 aa6.5□□□□□ -1.37
CAST-243ENST00000515160 MPP1Q00013 466 aa6.5□□□□□ -1.37
CAST-243ENST00000515160 KIF22Q14807 665 aa6.5□□□□□ -1.37
CAST-243ENST00000515160 RTP5Q14D33 572 aa6.5□□□□□ -1.37
CAST-243ENST00000515160 PABPC1LQ4VXU2 614 aaKnown RBP6.5□□□□□ -1.37
CAST-243ENST00000515160 FBXO47Q5MNV8 452 aa6.5□□□□□ -1.37
CAST-243ENST00000515160 PRAMEF14Q5SWL7 426 aa6.5□□□□□ -1.37
CAST-243ENST00000515160 ZNF572Q7Z3I7 529 aaPredicted RBP6.5□□□□□ -1.37
CAST-243ENST00000515160 TP53INP2Q8IXH6 220 aa6.5□□□□□ -1.37
CAST-243ENST00000515160 RTKN2Q8IZC4 609 aa6.5□□□□□ -1.37
CAST-243ENST00000515160 IPO4Q8TEX9 1081 aaKnown RBP6.5□□□□□ -1.37
CAST-243ENST00000515160 STYXQ8WUJ0 223 aa6.5□□□□□ -1.37
CAST-243ENST00000515160 RUBCNQ92622 972 aa6.5□□□□□ -1.37
CAST-243ENST00000515160 GORASP1Q9BQQ3 440 aa6.5□□□□□ -1.37
CAST-243ENST00000515160 CNPPD1Q9BV87 410 aa6.5□□□□□ -1.37
CAST-243ENST00000515160 STK31Q9BXU1 1019 aa6.5□□□□□ -1.37
CAST-243ENST00000515160 CHST8Q9H2A9 424 aa6.5□□□□□ -1.37
CAST-243ENST00000515160 NECTIN3Q9NQS3 549 aa6.5□□□□□ -1.37
CAST-243ENST00000515160 TBC1D23Q9NUY8 699 aa6.5□□□□□ -1.37
CAST-243ENST00000515160 CFAP97Q9P2B7 532 aa6.5□□□□□ -1.37
CAST-243ENST00000515160 IFT80Q9P2H3 777 aaPredicted RBP6.5□□□□□ -1.37
CAST-243ENST00000515160 GLTPD2A6NH11 291 aa6.49□□□□□ -1.37
CAST-243ENST00000515160 HRKO00198 91 aa6.49□□□□□ -1.37
CAST-243ENST00000515160 CYP27B1O15528 508 aa6.49□□□□□ -1.37
CAST-243ENST00000515160 HMGCRP04035 888 aa6.49□□□□□ -1.37
CAST-243ENST00000515160 ITGA5P08648 1049 aa6.49□□□□□ -1.37
CAST-243ENST00000515160 IDEP14735 1019 aa6.49□□□□□ -1.37
CAST-243ENST00000515160 CNTFP26441 200 aa6.49□□□□□ -1.37
CAST-243ENST00000515160 VIPR1P32241 457 aa6.49□□□□□ -1.37
CAST-243ENST00000515160 CTCFP49711 727 aaPredicted RBP6.49□□□□□ -1.37
CAST-243ENST00000515160 MEOX1P50221 254 aa6.49□□□□□ -1.37
CAST-243ENST00000515160 MXRA7P84157 204 aa6.49□□□□□ -1.37
CAST-243ENST00000515160 ADAM15Q13444 863 aa6.49□□□□□ -1.37
CAST-243ENST00000515160 PDE1CQ14123 709 aaPredicted RBP6.49□□□□□ -1.37
CAST-243ENST00000515160 ZNF792Q3KQV3 632 aa6.49□□□□□ -1.37
CAST-243ENST00000515160 ANKRD45Q5TZF3 282 aa6.49□□□□□ -1.37
CAST-243ENST00000515160 TANGO2Q6ICL3 276 aa6.49□□□□□ -1.37
CAST-243ENST00000515160 MZT2BQ6NZ67 158 aa6.49□□□□□ -1.37
CAST-243ENST00000515160 FAM180BQ6P0A1 224 aa6.49□□□□□ -1.37
CAST-243ENST00000515160 BORAQ6PGQ7 559 aa6.49□□□□□ -1.37
CAST-243ENST00000515160 B3GNT8Q7Z7M8 397 aa6.49□□□□□ -1.37
CAST-243ENST00000515160 IRF2BP1Q8IU81 584 aa6.49□□□□□ -1.37
CAST-243ENST00000515160 MPP5Q8N3R9 675 aa6.49□□□□□ -1.37
CAST-243ENST00000515160 VGLL2Q8N8G2 317 aa6.49□□□□□ -1.37
CAST-243ENST00000515160 GLIS1Q8NBF1 620 aa6.49□□□□□ -1.37
CAST-243ENST00000515160 IL17RDQ8NFM7 739 aa6.49□□□□□ -1.37
CAST-243ENST00000515160 MDM1Q8TC05 714 aa6.49□□□□□ -1.37
CAST-243ENST00000515160 PIGBQ92521 554 aa6.49□□□□□ -1.37
CAST-243ENST00000515160 GCDHQ92947 438 aaPredicted RBP6.49□□□□□ -1.37
CAST-243ENST00000515160 SNX27Q96L92 541 aa6.49□□□□□ -1.37
CAST-243ENST00000515160 PACSIN1Q9BY11 444 aa6.49□□□□□ -1.37
CAST-243ENST00000515160 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.49□□□□□ -1.37
CAST-243ENST00000515160 BRD9Q9H8M2 597 aa6.49□□□□□ -1.37
CAST-243ENST00000515160 TMEM8AQ9HCN3 771 aa6.49□□□□□ -1.37
CAST-243ENST00000515160 KIF17Q9P2E2 1029 aa6.49□□□□□ -1.37
CAST-243ENST00000515160 IGSF9Q9P2J2 1179 aa6.49□□□□□ -1.37
CAST-243ENST00000515160 TMEM98Q9Y2Y6 226 aa6.49□□□□□ -1.37
CAST-243ENST00000515160 MYH14Q7Z406 1995 aaKnown RBP6.49□□□□□ -1.37
CAST-243ENST00000515160 PASKQ96RG2 1323 aa6.49□□□□□ -1.37
CAST-243ENST00000515160 ADAMTS7Q9UKP4 1686 aa6.49□□□□□ -1.37
CAST-243ENST00000515160 COL5A3P25940 1745 aaPredicted RBP6.48□□□□□ -1.37
CAST-243ENST00000515160 THSD7BQ9C0I4 1608 aa6.48□□□□□ -1.37
CAST-243ENST00000515160 C2orf78A6NCI8 922 aa6.48□□□□□ -1.37
CAST-243ENST00000515160 PRSS47A8MTI9 375 aa6.48□□□□□ -1.37
CAST-243ENST00000515160 MYO1CO00159 1063 aa6.48□□□□□ -1.37
CAST-243ENST00000515160 PIP5K1BO14986 540 aa6.48□□□□□ -1.37
CAST-243ENST00000515160 RASSF9O75901 435 aa6.48□□□□□ -1.37
CAST-243ENST00000515160 GNAI2P04899 355 aa6.48□□□□□ -1.37
CAST-243ENST00000515160 POLBP06746 335 aa6.48□□□□□ -1.37
CAST-243ENST00000515160 RAP2AP10114 183 aa6.48□□□□□ -1.37
CAST-243ENST00000515160 CKMT1AP12532 417 aa6.48□□□□□ -1.37
CAST-243ENST00000515160 GYS1P13807 737 aa6.48□□□□□ -1.37
CAST-243ENST00000515160 IL1R1P14778 569 aa6.48□□□□□ -1.37
CAST-243ENST00000515160 ATF2P15336 505 aa6.48□□□□□ -1.37
CAST-243ENST00000515160 ALOX15P16050 662 aaPredicted RBP6.48□□□□□ -1.37
CAST-243ENST00000515160 XBP1P17861 261 aa6.48□□□□□ -1.37
CAST-243ENST00000515160 SPINK2P20155 84 aa6.48□□□□□ -1.37
CAST-243ENST00000515160 ELF1P32519 619 aa6.48□□□□□ -1.37
CAST-243ENST00000515160 ETV4P43268 484 aa6.48□□□□□ -1.37
CAST-243ENST00000515160 ALDH1A3P47895 512 aa6.48□□□□□ -1.37
CAST-243ENST00000515160 POU6F2P78424 691 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms