RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 ASGR2P07307 311 aa14.82□□□□□ -0.04
USP46-209ENST00000514536 HMGA1P17096 107 aaKnown RBP14.82□□□□□ -0.04
USP46-209ENST00000514536 SLC9A1P19634 815 aa14.82□□□□□ -0.04
USP46-209ENST00000514536 EEF1GP26641 437 aaKnown RBP14.82□□□□□ -0.04
USP46-209ENST00000514536 ANXA13P27216 316 aa14.82□□□□□ -0.04
USP46-209ENST00000514536 GABRR2P28476 465 aa14.82□□□□□ -0.04
USP46-209ENST00000514536 ADORA2BP29275 332 aa14.82□□□□□ -0.04
USP46-209ENST00000514536 RAD23BP54727 409 aa14.82□□□□□ -0.04
USP46-209ENST00000514536 YWHAEP62258 255 aaKnown RBP14.82□□□□□ -0.04
USP46-209ENST00000514536 MYL5Q02045 173 aa14.82□□□□□ -0.04
USP46-209ENST00000514536 TEAD2Q15562 447 aa14.82□□□□□ -0.04
USP46-209ENST00000514536 MIIPQ5JXC2 388 aa14.82□□□□□ -0.04
USP46-209ENST00000514536 CDKAL1Q5VV42 579 aa14.82□□□□□ -0.04
USP46-209ENST00000514536 PHLDB3Q6NSJ2 640 aa14.82□□□□□ -0.04
USP46-209ENST00000514536 POTEHQ6S545 545 aa14.82□□□□□ -0.04
USP46-209ENST00000514536 GBP6Q6ZN66 633 aa14.82□□□□□ -0.04
USP46-209ENST00000514536 GAREM2Q75VX8 874 aa14.82□□□□□ -0.04
USP46-209ENST00000514536 FAM35AQ86V20 835 aa14.82□□□□□ -0.04
USP46-209ENST00000514536 FUKQ8N0W3 1084 aa14.82□□□□□ -0.04
USP46-209ENST00000514536 CYFIP2Q96F07 1278 aa14.82□□□□□ -0.04
USP46-209ENST00000514536 DNAI2Q9GZS0 605 aa14.82□□□□□ -0.04
USP46-209ENST00000514536 NAT10Q9H0A0 1025 aaKnown RBP14.82□□□□□ -0.04
USP46-209ENST00000514536 ATXN3LQ9H3M9 355 aa14.82□□□□□ -0.04
USP46-209ENST00000514536 TMEM30AQ9NV96 361 aa14.82□□□□□ -0.04
USP46-209ENST00000514536 TAB2Q9NYJ8 693 aa14.82□□□□□ -0.04
USP46-209ENST00000514536 ZFP37Q9Y6Q3 630 aaPredicted RBP14.82□□□□□ -0.04
USP46-209ENST00000514536 ATP8B3O60423 1300 aa14.82□□□□□ -0.04
USP46-209ENST00000514536 TRIM66O15016 1216 aa14.81□□□□□ -0.04
USP46-209ENST00000514536 NCAPHQ15003 741 aa14.81□□□□□ -0.04
USP46-209ENST00000514536 EXOC3L4Q17RC7 722 aa14.81□□□□□ -0.04
USP46-209ENST00000514536 AOPEPQ8N6M6 819 aa14.81□□□□□ -0.04
USP46-209ENST00000514536 SLC4A11Q8NBS3 891 aa14.81□□□□□ -0.04
USP46-209ENST00000514536 RSAD2Q8WXG1 361 aa14.81□□□□□ -0.04
USP46-209ENST00000514536 SPATA17Q96L03 361 aa14.81□□□□□ -0.04
USP46-209ENST00000514536 C8orf48Q96LL4 319 aa14.81□□□□□ -0.04
USP46-209ENST00000514536 KCNK16Q96T55 309 aa14.81□□□□□ -0.04
USP46-209ENST00000514536 HNRNPABQ99729 332 aaKnown RBP14.81□□□□□ -0.04
USP46-209ENST00000514536 FUCA2Q9BTY2 467 aa14.81□□□□□ -0.04
USP46-209ENST00000514536 FAM124BQ9H5Z6 455 aaPredicted RBP14.81□□□□□ -0.04
USP46-209ENST00000514536 IL21Q9HBE4 155 aa14.81□□□□□ -0.04
USP46-209ENST00000514536 UBE2TQ9NPD8 197 aaPredicted RBP14.81□□□□□ -0.04
USP46-209ENST00000514536 GDE1Q9NZC3 331 aa14.81□□□□□ -0.04
USP46-209ENST00000514536 PCDHB4Q9Y5E5 795 aa14.81□□□□□ -0.04
USP46-209ENST00000514536 NOTCH4Q99466 2003 aa14.81□□□□□ -0.04
USP46-209ENST00000514536 GTPBP10A4D1E9 387 aaKnown RBP14.81□□□□□ -0.04
USP46-209ENST00000514536 AP1G2O75843 785 aa14.81□□□□□ -0.04
USP46-209ENST00000514536 NOL4O94818 638 aa14.81□□□□□ -0.04
USP46-209ENST00000514536 FGF19O95750 216 aa14.81□□□□□ -0.04
USP46-209ENST00000514536 APBA1Q02410 837 aa14.81□□□□□ -0.04
USP46-209ENST00000514536 KRT31Q15323 416 aa14.81□□□□□ -0.04
USP46-209ENST00000514536 TRIM65Q6PJ69 517 aa14.81□□□□□ -0.04
USP46-209ENST00000514536 UBR7Q8N806 425 aa14.81□□□□□ -0.04
USP46-209ENST00000514536 SMARCD1Q96GM5 515 aa14.81□□□□□ -0.04
USP46-209ENST00000514536 ZSWIM3Q96MP5 696 aa14.81□□□□□ -0.04
USP46-209ENST00000514536 KCNK12Q9HB15 430 aa14.81□□□□□ -0.04
USP46-209ENST00000514536 ANHXE9PGG2 379 aa14.8□□□□□ -0.04
USP46-209ENST00000514536 BEST1O76090 585 aa14.8□□□□□ -0.04
USP46-209ENST00000514536 F11P03951 625 aa14.8□□□□□ -0.04
USP46-209ENST00000514536 CDK11BP21127 795 aaKnown RBP14.8□□□□□ -0.04
USP46-209ENST00000514536 ACO1P21399 889 aaKnown RBP14.8□□□□□ -0.04
USP46-209ENST00000514536 PON1P27169 355 aa14.8□□□□□ -0.04
USP46-209ENST00000514536 CDC25CP30307 473 aa14.8□□□□□ -0.04
USP46-209ENST00000514536 GCNT1Q02742 428 aa14.8□□□□□ -0.04
USP46-209ENST00000514536 NFKBIBQ15653 356 aa14.8□□□□□ -0.04
USP46-209ENST00000514536 STXBP5Q5T5C0 1151 aa14.8□□□□□ -0.04
USP46-209ENST00000514536 PPP1R26Q5T8A7 1209 aaPredicted RBP14.8□□□□□ -0.04
USP46-209ENST00000514536 GJB7Q6PEY0 223 aa14.8□□□□□ -0.04
USP46-209ENST00000514536 TMEM270Q6UE05 265 aa14.8□□□□□ -0.04
USP46-209ENST00000514536 PARM1Q6UWI2 310 aa14.8□□□□□ -0.04
USP46-209ENST00000514536 DENND5BQ6ZUT9 1274 aa14.8□□□□□ -0.04
USP46-209ENST00000514536 CEP295NLQ96MC4 621 aa14.8□□□□□ -0.04
USP46-209ENST00000514536 KREMEN1Q96MU8 473 aa14.8□□□□□ -0.04
USP46-209ENST00000514536 SMOQ99835 787 aa14.8□□□□□ -0.04
USP46-209ENST00000514536 BPIFA3Q9BQP9 254 aa14.8□□□□□ -0.04
USP46-209ENST00000514536 LRFN3Q9BTN0 628 aa14.8□□□□□ -0.04
USP46-209ENST00000514536 RPP25Q9BUL9 199 aaKnown RBP14.8□□□□□ -0.04
USP46-209ENST00000514536 VPS16Q9H269 839 aa14.8□□□□□ -0.04
USP46-209ENST00000514536 SLITRK6Q9H5Y7 841 aa14.8□□□□□ -0.04
USP46-209ENST00000514536 DMAP1Q9NPF5 467 aaPredicted RBP14.8□□□□□ -0.04
USP46-209ENST00000514536 C11orf16Q9NQ32 467 aa14.8□□□□□ -0.04
USP46-209ENST00000514536 KRT82Q9NSB4 513 aa14.8□□□□□ -0.04
USP46-209ENST00000514536 IGSF9Q9P2J2 1179 aa14.8□□□□□ -0.04
USP46-209ENST00000514536 C5orf42Q9H799 3197 aa14.8□□□□□ -0.04
USP46-209ENST00000514536 PI4K2BG5E9Z4 385 aa14.79□□□□□ -0.04
USP46-209ENST00000514536 RNF225M0QZC1 329 aaPredicted RBP14.79□□□□□ -0.04
USP46-209ENST00000514536 DCXO43602 365 aa14.79□□□□□ -0.04
USP46-209ENST00000514536 FAM200BP0CF97 657 aa14.79□□□□□ -0.04
USP46-209ENST00000514536 ZNF165P49910 485 aa14.79□□□□□ -0.04
USP46-209ENST00000514536 MAP3K7CLP57077 242 aa14.79□□□□□ -0.04
USP46-209ENST00000514536 USP46P62068 366 aa14.79□□□□□ -0.04
USP46-209ENST00000514536 CYP4F8P98187 520 aa14.79□□□□□ -0.04
USP46-209ENST00000514536 PTPN21Q16825 1174 aa14.79□□□□□ -0.04
USP46-209ENST00000514536 ZSCAN23Q3MJ62 389 aa14.79□□□□□ -0.04
USP46-209ENST00000514536 ARHGAP15Q53QZ3 475 aa14.79□□□□□ -0.04
USP46-209ENST00000514536 FAM78AQ5JUQ0 283 aa14.79□□□□□ -0.04
USP46-209ENST00000514536 GPR158Q5T848 1215 aa14.79□□□□□ -0.04
USP46-209ENST00000514536 TMEM150AQ86TG1 271 aa14.79□□□□□ -0.04
USP46-209ENST00000514536 ZMIZ2Q8NF64 920 aa14.79□□□□□ -0.04
USP46-209ENST00000514536 FGF14Q92915 247 aa14.79□□□□□ -0.04
USP46-209ENST00000514536 TRMT2BQ96GJ1 504 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms