RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	SLC13A2	Q13183	592 aa		5.19	□□□□□ -1.58
MATR3-223	ENST00000514402	TREML2	Q5T2D2	321 aa		5.19	□□□□□ -1.58
MATR3-223	ENST00000514402	SLC29A4	Q7RTT9	530 aa		5.19	□□□□□ -1.58
MATR3-223	ENST00000514402	SLC15A3	Q8IY34	581 aa		5.19	□□□□□ -1.58
MATR3-223	ENST00000514402	SEMA6D	Q8NFY4	1073 aa		5.19	□□□□□ -1.58
MATR3-223	ENST00000514402	JDP2	Q8WYK2	163 aa		5.19	□□□□□ -1.58
MATR3-223	ENST00000514402	ZNF518B	Q9C0D4	1074 aa		5.19	□□□□□ -1.58
MATR3-223	ENST00000514402	ATP6V0A4	Q9HBG4	840 aa		5.19	□□□□□ -1.58
MATR3-223	ENST00000514402	TRMT13	Q9NUP7	481 aa	Known RBP	5.19	□□□□□ -1.58
MATR3-223	ENST00000514402	GOLGA6A	Q9NYA3	693 aa		5.19	□□□□□ -1.58
MATR3-223	ENST00000514402	L1RE1	Q9UN81	338 aa		5.19	□□□□□ -1.58
MATR3-223	ENST00000514402	KAT6A	Q92794	2004 aa		5.19	□□□□□ -1.58
MATR3-223	ENST00000514402	AOX1	Q06278	1338 aa		5.19	□□□□□ -1.58
MATR3-223	ENST00000514402	WIPF3	A6NGB9	483 aa		5.18	□□□□□ -1.58
MATR3-223	ENST00000514402	LINC01548	A6NM66	108 aa		5.18	□□□□□ -1.58
MATR3-223	ENST00000514402	TARM1	B6A8C7	271 aa		5.18	□□□□□ -1.58
MATR3-223	ENST00000514402		H0YIZ8	118 aa		5.18	□□□□□ -1.58
MATR3-223	ENST00000514402	QSOX1	O00391	747 aa		5.18	□□□□□ -1.58
MATR3-223	ENST00000514402	HNRNPC	P07910	306 aa	Known RBP eCLIP	5.18	□□□□□ -1.58	1e-7	■■■□□ 18.6
MATR3-223	ENST00000514402	PDHA1	P08559	390 aa		5.18	□□□□□ -1.58
MATR3-223	ENST00000514402	DLD	P09622	509 aa	Known RBP	5.18	□□□□□ -1.58
MATR3-223	ENST00000514402	KIT	P10721	976 aa		5.18	□□□□□ -1.58
MATR3-223	ENST00000514402	EEFSEC	P57772	596 aa	Known RBP	5.18	□□□□□ -1.58
MATR3-223	ENST00000514402	KRT17	Q04695	432 aa		5.18	□□□□□ -1.58
MATR3-223	ENST00000514402	CTBP1	Q13363	440 aa		5.18	□□□□□ -1.58
MATR3-223	ENST00000514402	TBC1D25	Q3MII6	688 aa		5.18	□□□□□ -1.58
MATR3-223	ENST00000514402	PARS2	Q7L3T8	475 aa	Known RBP	5.18	□□□□□ -1.58
MATR3-223	ENST00000514402	SRGAP1	Q7Z6B7	1085 aa		5.18	□□□□□ -1.58
MATR3-223	ENST00000514402	AMIGO2	Q86SJ2	522 aa		5.18	□□□□□ -1.58
MATR3-223	ENST00000514402	SLC15A4	Q8N697	577 aa		5.18	□□□□□ -1.58
MATR3-223	ENST00000514402	SOCS4	Q8WXH5	440 aa		5.18	□□□□□ -1.58
MATR3-223	ENST00000514402	RSPRY1	Q96DX4	576 aa		5.18	□□□□□ -1.58
MATR3-223	ENST00000514402	FSD1L	Q9BXM9	530 aa		5.18	□□□□□ -1.58
MATR3-223	ENST00000514402	SEMA4C	Q9C0C4	833 aa		5.18	□□□□□ -1.58
MATR3-223	ENST00000514402	SMURF2	Q9HAU4	748 aa		5.18	□□□□□ -1.58
MATR3-223	ENST00000514402	XPNPEP3	Q9NQH7	507 aa		5.18	□□□□□ -1.58
MATR3-223	ENST00000514402	DUSP22	Q9NRW4	184 aa		5.18	□□□□□ -1.58
MATR3-223	ENST00000514402	DLL3	Q9NYJ7	618 aa		5.18	□□□□□ -1.58
MATR3-223	ENST00000514402	FLRT1	Q9NZU1	646 aa		5.18	□□□□□ -1.58
MATR3-223	ENST00000514402	GABRQ	Q9UN88	632 aa		5.18	□□□□□ -1.58
MATR3-223	ENST00000514402		A1L4Q6	167 aa		5.17	□□□□□ -1.58
MATR3-223	ENST00000514402	MBD3L4	A6NDZ8	208 aa	Predicted RBP	5.17	□□□□□ -1.58
MATR3-223	ENST00000514402	MBD3L3	A6NE82	208 aa	Predicted RBP	5.17	□□□□□ -1.58
MATR3-223	ENST00000514402	HRG	P04196	525 aa		5.17	□□□□□ -1.58
MATR3-223	ENST00000514402	PRKCB	P05771	671 aa		5.17	□□□□□ -1.58
MATR3-223	ENST00000514402	CSF1R	P07333	972 aa		5.17	□□□□□ -1.58
MATR3-223	ENST00000514402	NPS	P0C0P6	89 aa		5.17	□□□□□ -1.58
MATR3-223	ENST00000514402	SLC7A1	P30825	629 aa		5.17	□□□□□ -1.58
MATR3-223	ENST00000514402	LIPA	P38571	399 aa		5.17	□□□□□ -1.58
MATR3-223	ENST00000514402	TPTE	P56180	551 aa		5.17	□□□□□ -1.58
MATR3-223	ENST00000514402	MLC1	Q15049	377 aa		5.17	□□□□□ -1.58
MATR3-223	ENST00000514402	LLGL1	Q15334	1064 aa		5.17	□□□□□ -1.58
MATR3-223	ENST00000514402	CNN3	Q15417	329 aa	Known RBP	5.17	□□□□□ -1.58
MATR3-223	ENST00000514402	ZKSCAN2	Q63HK3	967 aa		5.17	□□□□□ -1.58
MATR3-223	ENST00000514402	RAVER1	Q8IY67	606 aa	Known RBP	5.17	□□□□□ -1.58
MATR3-223	ENST00000514402	OSCP1	Q8WVF1	389 aa		5.17	□□□□□ -1.58
MATR3-223	ENST00000514402	GLG1	Q92896	1179 aa		5.17	□□□□□ -1.58
MATR3-223	ENST00000514402	NT5C1B	Q96P26	610 aa		5.17	□□□□□ -1.58
MATR3-223	ENST00000514402	C22orf23	Q9BZE7	217 aa		5.17	□□□□□ -1.58
MATR3-223	ENST00000514402	CXorf36	Q9H7Y0	433 aa		5.17	□□□□□ -1.58
MATR3-223	ENST00000514402	A1CF	Q9NQ94	594 aa	Known RBP	5.17	□□□□□ -1.58
MATR3-223	ENST00000514402	NOB1	Q9ULX3	412 aa	Known RBP	5.17	□□□□□ -1.58
MATR3-223	ENST00000514402	CCP110	O43303	1012 aa		5.16	□□□□□ -1.58
MATR3-223	ENST00000514402	TSPAN6	O43657	245 aa		5.16	□□□□□ -1.58
MATR3-223	ENST00000514402	FES	P07332	822 aa		5.16	□□□□□ -1.58
MATR3-223	ENST00000514402	KCNA3	P22001	575 aa		5.16	□□□□□ -1.58
MATR3-223	ENST00000514402	CYP2C18	P33260	490 aa		5.16	□□□□□ -1.58
MATR3-223	ENST00000514402	CLCN2	P51788	898 aa		5.16	□□□□□ -1.58
MATR3-223	ENST00000514402	INSC	Q1MX18	579 aa		5.16	□□□□□ -1.58
MATR3-223	ENST00000514402	ARHGAP29	Q52LW3	1261 aa		5.16	□□□□□ -1.58
MATR3-223	ENST00000514402	ABRA	Q8N0Z2	381 aa		5.16	□□□□□ -1.58
MATR3-223	ENST00000514402	MYO1H	Q8N1T3	1032 aa		5.16	□□□□□ -1.58
MATR3-223	ENST00000514402	LRRC71	Q8N4P6	559 aa		5.16	□□□□□ -1.58
MATR3-223	ENST00000514402	FANCB	Q8NB91	859 aa		5.16	□□□□□ -1.58
MATR3-223	ENST00000514402	NMD3	Q96D46	503 aa	Known RBP	5.16	□□□□□ -1.58
MATR3-223	ENST00000514402	REPS1	Q96D71	796 aa		5.16	□□□□□ -1.58
MATR3-223	ENST00000514402	MS4A7	Q9GZW8	240 aa	Predicted RBP	5.16	□□□□□ -1.58
MATR3-223	ENST00000514402	SERGEF	Q9UGK8	458 aa		5.16	□□□□□ -1.58
MATR3-223	ENST00000514402	TPCN1	Q9ULQ1	816 aa		5.16	□□□□□ -1.58
MATR3-223	ENST00000514402	TRIM43B	A6NCK2	446 aa		5.15	□□□□□ -1.59
MATR3-223	ENST00000514402	CGB1	A6NKQ9	187 aa		5.15	□□□□□ -1.59
MATR3-223	ENST00000514402	hCG_1984214	I3L0E3	225 aa		5.15	□□□□□ -1.59
MATR3-223	ENST00000514402	INO80B-WBP1	J3KQ70	363 aa		5.15	□□□□□ -1.59
MATR3-223	ENST00000514402		M0R3H8	397 aa		5.15	□□□□□ -1.59
MATR3-223	ENST00000514402	ZNF213	O14771	459 aa		5.15	□□□□□ -1.59
MATR3-223	ENST00000514402	TBX3	O15119	743 aa		5.15	□□□□□ -1.59
MATR3-223	ENST00000514402	PRPF3	O43395	683 aa	Known RBP	5.15	□□□□□ -1.59
MATR3-223	ENST00000514402	ZBED1	O96006	694 aa		5.15	□□□□□ -1.59
MATR3-223	ENST00000514402	KLRC1	P26715	233 aa		5.15	□□□□□ -1.59
MATR3-223	ENST00000514402	TFF2	Q03403	129 aa		5.15	□□□□□ -1.59
MATR3-223	ENST00000514402	POLD3	Q15054	466 aa	Predicted RBP	5.15	□□□□□ -1.59
MATR3-223	ENST00000514402	LRRC41	Q15345	812 aa		5.15	□□□□□ -1.59
MATR3-223	ENST00000514402	GFOD2	Q3B7J2	385 aa		5.15	□□□□□ -1.59
MATR3-223	ENST00000514402	PLA1A	Q53H76	456 aa		5.15	□□□□□ -1.59
MATR3-223	ENST00000514402	CERCAM	Q5T4B2	595 aa		5.15	□□□□□ -1.59
MATR3-223	ENST00000514402	SWSAP1	Q6NVH7	229 aa		5.15	□□□□□ -1.59
MATR3-223	ENST00000514402	APOA5	Q6Q788	366 aa		5.15	□□□□□ -1.59
MATR3-223	ENST00000514402		Q6ZWC4	215 aa		5.15	□□□□□ -1.59
MATR3-223	ENST00000514402	CHST15	Q7LFX5	561 aa	Predicted RBP	5.15	□□□□□ -1.59
MATR3-223	ENST00000514402	ZNF280B	Q86YH2	543 aa		5.15	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms