RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 TTLL5Q6EMB2 1281 aa8.35□□□□□ -1.07
RFC1-214ENST00000512726 MFSD5Q6N075 450 aa8.35□□□□□ -1.07
RFC1-214ENST00000512726 MED25Q71SY5 747 aa8.35□□□□□ -1.07
RFC1-214ENST00000512726 GPRIN1Q7Z2K8 1008 aa8.35□□□□□ -1.07
RFC1-214ENST00000512726 KBTBD2Q8IY47 623 aa8.35□□□□□ -1.07
RFC1-214ENST00000512726 CARFQ8N187 725 aa8.35□□□□□ -1.07
RFC1-214ENST00000512726 CFAP52Q8N1V2 620 aa8.35□□□□□ -1.07
RFC1-214ENST00000512726 TMTC2Q8N394 836 aa8.35□□□□□ -1.07
RFC1-214ENST00000512726 UBE2Q2Q8WVN8 375 aa8.35□□□□□ -1.07
RFC1-214ENST00000512726 MBD6Q96DN6 1003 aa8.35□□□□□ -1.07
RFC1-214ENST00000512726 FAM227BQ96M60 508 aa8.35□□□□□ -1.07
RFC1-214ENST00000512726 CPPED1Q9BRF8 314 aaPredicted RBP8.35□□□□□ -1.07
RFC1-214ENST00000512726 LSM14BQ9BX40 385 aaKnown RBP8.35□□□□□ -1.07
RFC1-214ENST00000512726 ETAA1Q9NY74 926 aa8.35□□□□□ -1.07
RFC1-214ENST00000512726 DNMT3BQ9UBC3 853 aaKnown RBP8.35□□□□□ -1.07
RFC1-214ENST00000512726 CDYLQ9Y232 598 aa8.35□□□□□ -1.07
RFC1-214ENST00000512726 TCERG1O14776 1098 aaKnown RBP8.34□□□□□ -1.07
RFC1-214ENST00000512726 DCLK1O15075 740 aa8.34□□□□□ -1.07
RFC1-214ENST00000512726 DDX58O95786 925 aaKnown RBP8.34□□□□□ -1.07
RFC1-214ENST00000512726 TBX18O95935 607 aa8.34□□□□□ -1.07
RFC1-214ENST00000512726 ANXA6P08133 673 aa8.34□□□□□ -1.07
RFC1-214ENST00000512726 GNAT2P19087 354 aa8.34□□□□□ -1.07
RFC1-214ENST00000512726 RXRAP19793 462 aa8.34□□□□□ -1.07
RFC1-214ENST00000512726 ZNF844Q08AG5 666 aa8.34□□□□□ -1.07
RFC1-214ENST00000512726 GPS1Q13098 491 aa8.34□□□□□ -1.07
RFC1-214ENST00000512726 ATP1A4Q13733 1029 aa8.34□□□□□ -1.07
RFC1-214ENST00000512726 MANEALQ5VSG8 457 aa8.34□□□□□ -1.07
RFC1-214ENST00000512726 NFRKBQ6P4R8 1299 aa8.34□□□□□ -1.07
RFC1-214ENST00000512726 DRICH1Q6PGQ1 229 aaPredicted RBP8.34□□□□□ -1.07
RFC1-214ENST00000512726 TTC30AQ86WT1 665 aa8.34□□□□□ -1.07
RFC1-214ENST00000512726 TMEM57Q8N5G2 664 aa8.34□□□□□ -1.07
RFC1-214ENST00000512726 TSPYL6Q8N831 410 aa8.34□□□□□ -1.07
RFC1-214ENST00000512726 CPT1CQ8TCG5 803 aa8.34□□□□□ -1.07
RFC1-214ENST00000512726 BPIFB1Q8TDL5 484 aa8.34□□□□□ -1.07
RFC1-214ENST00000512726 WDR60Q8WVS4 1066 aa8.34□□□□□ -1.07
RFC1-214ENST00000512726 TRIB1Q96RU8 372 aa8.34□□□□□ -1.07
RFC1-214ENST00000512726 TLR10Q9BXR5 811 aa8.34□□□□□ -1.07
RFC1-214ENST00000512726 TWSG1Q9GZX9 223 aa8.34□□□□□ -1.07
RFC1-214ENST00000512726 RAD54BQ9Y620 910 aa8.34□□□□□ -1.07
RFC1-214ENST00000512726 CARMIL2Q6F5E8 1435 aa8.34□□□□□ -1.07
RFC1-214ENST00000512726 OR2W5A6NFC9 320 aa8.33□□□□□ -1.08
RFC1-214ENST00000512726 ZNF500O60304 480 aaPredicted RBP8.33□□□□□ -1.08
RFC1-214ENST00000512726 AKT1P31749 480 aa8.33□□□□□ -1.08
RFC1-214ENST00000512726 PXNP49023 591 aaPredicted RBP8.33□□□□□ -1.08
RFC1-214ENST00000512726 LOXL3P58215 753 aa8.33□□□□□ -1.08
RFC1-214ENST00000512726 LILRA4P59901 499 aa8.33□□□□□ -1.08
RFC1-214ENST00000512726 CHRNDQ07001 517 aa8.33□□□□□ -1.08
RFC1-214ENST00000512726 PRKG2Q13237 762 aa8.33□□□□□ -1.08
RFC1-214ENST00000512726 BOP1Q14137 746 aaKnown RBP8.33□□□□□ -1.08
RFC1-214ENST00000512726 TOMM20Q15388 145 aa8.33□□□□□ -1.08
RFC1-214ENST00000512726 SURF1Q15526 300 aa8.33□□□□□ -1.08
RFC1-214ENST00000512726 NOMO2Q5JPE7 1267 aa8.33□□□□□ -1.08
RFC1-214ENST00000512726 RINT1Q6NUQ1 792 aa8.33□□□□□ -1.08
RFC1-214ENST00000512726 TAPT1Q6NXT6 567 aa8.33□□□□□ -1.08
RFC1-214ENST00000512726 RRAGAQ7L523 313 aa8.33□□□□□ -1.08
RFC1-214ENST00000512726 FAM124AQ86V42 546 aa8.33□□□□□ -1.08
RFC1-214ENST00000512726 ZNF280BQ86YH2 543 aa8.33□□□□□ -1.08
RFC1-214ENST00000512726 PSD4Q8NDX1 1056 aa8.33□□□□□ -1.08
RFC1-214ENST00000512726 GOLGA1Q92805 767 aa8.33□□□□□ -1.08
RFC1-214ENST00000512726 C3orf49Q96BT1 292 aa8.33□□□□□ -1.08
RFC1-214ENST00000512726 HVCN1Q96D96 273 aa8.33□□□□□ -1.08
RFC1-214ENST00000512726 ZNF668Q96K58 619 aaPredicted RBP8.33□□□□□ -1.08
RFC1-214ENST00000512726 PHACTR3Q96KR7 559 aa8.33□□□□□ -1.08
RFC1-214ENST00000512726 MED15Q96RN5 788 aa8.33□□□□□ -1.08
RFC1-214ENST00000512726 REXO4Q9GZR2 422 aaKnown RBP8.33□□□□□ -1.08
RFC1-214ENST00000512726 ZCWPW1Q9H0M4 648 aa8.33□□□□□ -1.08
RFC1-214ENST00000512726 NELFAQ9H3P2 528 aa8.33□□□□□ -1.08
RFC1-214ENST00000512726 ELAC1Q9H777 363 aaKnown RBP8.33□□□□□ -1.08
RFC1-214ENST00000512726 AGO3Q9H9G7 860 aaKnown RBP8.33□□□□□ -1.08
RFC1-214ENST00000512726 TMEM160Q9NX00 188 aa8.33□□□□□ -1.08
RFC1-214ENST00000512726 POLG2Q9UHN1 485 aa8.33□□□□□ -1.08
RFC1-214ENST00000512726 C19orf53Q9UNZ5 99 aaPredicted RBP8.33□□□□□ -1.08
RFC1-214ENST00000512726 MROH6A6NGR9 719 aa8.32□□□□□ -1.08
RFC1-214ENST00000512726 DRGXA6NNA5 263 aa8.32□□□□□ -1.08
RFC1-214ENST00000512726 K7ENM7 598 aa8.32□□□□□ -1.08
RFC1-214ENST00000512726 MATN2O00339 956 aa8.32□□□□□ -1.08
RFC1-214ENST00000512726 FIBPO43427 364 aa8.32□□□□□ -1.08
RFC1-214ENST00000512726 TRIM13O60858 407 aa8.32□□□□□ -1.08
RFC1-214ENST00000512726 FCER1AP12319 257 aa8.32□□□□□ -1.08
RFC1-214ENST00000512726 PI3P19957 117 aa8.32□□□□□ -1.08
RFC1-214ENST00000512726 CHRM3P20309 590 aa8.32□□□□□ -1.08
RFC1-214ENST00000512726 KLRK1P26718 216 aa8.32□□□□□ -1.08
RFC1-214ENST00000512726 SEC24CP53992 1094 aa8.32□□□□□ -1.08
RFC1-214ENST00000512726 NR1H2P55055 460 aa8.32□□□□□ -1.08
RFC1-214ENST00000512726 SLFN5Q08AF3 891 aa8.32□□□□□ -1.08
RFC1-214ENST00000512726 MAP3K21Q5TCX8 1036 aa8.32□□□□□ -1.08
RFC1-214ENST00000512726 ZNF280DQ6N043 979 aa8.32□□□□□ -1.08
RFC1-214ENST00000512726 RINLQ6ZS11 566 aa8.32□□□□□ -1.08
RFC1-214ENST00000512726 TCP11L2Q8N4U5 519 aa8.32□□□□□ -1.08
RFC1-214ENST00000512726 CEP70Q8NHQ1 597 aa8.32□□□□□ -1.08
RFC1-214ENST00000512726 CSGALNACT1Q8TDX6 532 aa8.32□□□□□ -1.08
RFC1-214ENST00000512726 ABHD5Q8WTS1 349 aa8.32□□□□□ -1.08
RFC1-214ENST00000512726 PPP2R3CQ969Q6 453 aa8.32□□□□□ -1.08
RFC1-214ENST00000512726 RRP36Q96EU6 259 aaKnown RBP8.32□□□□□ -1.08
RFC1-214ENST00000512726 NEIL1Q96FI4 390 aaPredicted RBP8.32□□□□□ -1.08
RFC1-214ENST00000512726 BRD8Q9H0E9 1235 aa8.32□□□□□ -1.08
RFC1-214ENST00000512726 PLEKHA5Q9HAU0 1116 aa8.32□□□□□ -1.08
RFC1-214ENST00000512726 NOD2Q9HC29 1040 aa8.32□□□□□ -1.08
RFC1-214ENST00000512726 PREBQ9HCU5 417 aa8.32□□□□□ -1.08
RFC1-214ENST00000512726 OLA1Q9NTK5 396 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms