RNA–Protein interactions for RNA: ENST00000512643.1

PDS5A-209, Transcript of PDS5 cohesin associated factor A, humanhuman

TSL 4

Gene PDS5A, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-209ENST00000512643 LARP4Q71RC2 724 aaKnown RBP eCLIP5.3□□□□□ -1.56
PDS5A-209ENST00000512643 RNF44Q7L0R7 432 aa5.3□□□□□ -1.56
PDS5A-209ENST00000512643 ZSWIM9Q86XI8 627 aa5.3□□□□□ -1.56
PDS5A-209ENST00000512643 MFN1Q8IWA4 741 aa5.3□□□□□ -1.56
PDS5A-209ENST00000512643 RNF168Q8IYW5 571 aaPredicted RBP5.3□□□□□ -1.56
PDS5A-209ENST00000512643 ABI1Q8IZP0 508 aa5.3□□□□□ -1.56
PDS5A-209ENST00000512643 LINC00482Q8N8I6 264 aa5.3□□□□□ -1.56
PDS5A-209ENST00000512643 SMYD1Q8NB12 490 aa5.3□□□□□ -1.56
PDS5A-209ENST00000512643 APPL2Q8NEU8 664 aa5.3□□□□□ -1.56
PDS5A-209ENST00000512643 IL17REQ8NFR9 667 aa5.3□□□□□ -1.56
PDS5A-209ENST00000512643 BICD2Q8TD16 824 aa5.3□□□□□ -1.56
PDS5A-209ENST00000512643 MZB1Q8WU39 189 aa5.3□□□□□ -1.56
PDS5A-209ENST00000512643 KIF1BPQ96EK5 621 aa5.3□□□□□ -1.56
PDS5A-209ENST00000512643 UBXN10Q96LJ8 280 aa5.3□□□□□ -1.56
PDS5A-209ENST00000512643 ZSCAN31Q96LW9 406 aaPredicted RBP5.3□□□□□ -1.56
PDS5A-209ENST00000512643 NEK1Q96PY6 1258 aa5.3□□□□□ -1.56
PDS5A-209ENST00000512643 SPAG5Q96R06 1193 aa5.3□□□□□ -1.56
PDS5A-209ENST00000512643 STK31Q9BXU1 1019 aa5.3□□□□□ -1.56
PDS5A-209ENST00000512643 PACSIN1Q9BY11 444 aa5.3□□□□□ -1.56
PDS5A-209ENST00000512643 ZNF518BQ9C0D4 1074 aa5.3□□□□□ -1.56
PDS5A-209ENST00000512643 BRD8Q9H0E9 1235 aa5.3□□□□□ -1.56
PDS5A-209ENST00000512643 TTLL3Q9Y4R7 772 aa5.3□□□□□ -1.56
PDS5A-209ENST00000512643 A0A1W2PRQ8 180 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 GTPBP10A4D1E9 387 aaKnown RBP5.29□□□□□ -1.56
PDS5A-209ENST00000512643 AQP12BA6NM10 295 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 PYCARD-AS1I3L0S3 204 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 KIF2AO00139 706 aaPredicted RBP5.29□□□□□ -1.56
PDS5A-209ENST00000512643 NRP1O14786 923 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 KIAA0391O15091 583 aaKnown RBP5.29□□□□□ -1.56
PDS5A-209ENST00000512643 P4HA2O15460 535 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 IRAK2O43187 625 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 MTSS1O43312 755 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 ZNF189O75820 626 aaPredicted RBP5.29□□□□□ -1.56
PDS5A-209ENST00000512643 RHOBTB3O94955 611 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 FGFR1OPO95684 399 aaKnown RBP5.29□□□□□ -1.56
PDS5A-209ENST00000512643 NDST3O95803 873 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 GNAI2P04899 355 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 GJB1P08034 283 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 HSPA1AP0DMV8 641 aaKnown RBP5.29□□□□□ -1.56
PDS5A-209ENST00000512643 HSPA1BP0DMV9 641 aaKnown RBP5.29□□□□□ -1.56
PDS5A-209ENST00000512643 MTHFD1P11586 935 aaKnown RBP5.29□□□□□ -1.56
PDS5A-209ENST00000512643 IL1R1P14778 569 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 IGFBP6P24592 240 aaPredicted RBP5.29□□□□□ -1.56
PDS5A-209ENST00000512643 RPL13P26373 211 aaKnown RBP5.29□□□□□ -1.56
PDS5A-209ENST00000512643 KIF5BP33176 963 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 CASRP41180 1078 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 LIMS1P48059 325 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 CCT8P50990 548 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 RRADP55042 308 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 FOXO4P98177 505 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 DDX10Q13206 875 aaKnown RBP5.29□□□□□ -1.56
PDS5A-209ENST00000512643 TBX2Q13207 712 aaPredicted RBP5.29□□□□□ -1.56
PDS5A-209ENST00000512643 LAMB3Q13751 1172 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 SPARCL1Q14515 664 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 RASA2Q15283 850 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 TAF12Q16514 161 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 CFAP58Q5T655 872 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 LMBRD2Q68DH5 695 aaPredicted RBP5.29□□□□□ -1.56
PDS5A-209ENST00000512643 KRT40Q6A162 431 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 JMJD6Q6NYC1 403 aaPredicted RBP5.29□□□□□ -1.56
PDS5A-209ENST00000512643 PDXDC1Q6P996 788 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 OLFML1Q6UWY5 402 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 CATSPERGQ6ZRH7 1159 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 RFX8Q6ZV50 586 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 MAATS1Q7Z4T9 603 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 RPAP2Q8IXW5 612 aaPredicted RBP5.29□□□□□ -1.56
PDS5A-209ENST00000512643 SLC7A5P1Q8MH63 180 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 GBP7Q8N8V2 638 aaPredicted RBP5.29□□□□□ -1.56
PDS5A-209ENST00000512643 NAXEQ8NCW5 288 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 CCDC150Q8NCX0 1101 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 NUDT10Q8NFP7 164 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 B4GALNT2Q8NHY0 566 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 CTCFLQ8NI51 663 aaPredicted RBP5.29□□□□□ -1.56
PDS5A-209ENST00000512643 ANKRD49Q8WVL7 239 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 SLC7A6OSQ96CW6 309 aaPredicted RBP5.29□□□□□ -1.56
PDS5A-209ENST00000512643 SAAL1Q96ER3 474 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 NUDT11Q96G61 164 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 LIN37Q96GY3 246 aaPredicted RBP5.29□□□□□ -1.56
PDS5A-209ENST00000512643 UROC1Q96N76 676 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 EIF2AQ9BY44 585 aaKnown RBP5.29□□□□□ -1.56
PDS5A-209ENST00000512643 TSGA10Q9BZW7 698 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 KATNBL1Q9H079 304 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 VPS33BQ9H267 617 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 BRD9Q9H8M2 597 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 TCF7L2Q9NQB0 619 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 CFAP97Q9P2B7 532 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 ZNF212Q9UDV6 495 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 MBD1Q9UIS9 605 aaPredicted RBP5.29□□□□□ -1.56
PDS5A-209ENST00000512643 GJD2Q9UKL4 321 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 MYO6Q9UM54 1294 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 SSX2IPQ9Y2D8 614 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 ATRNL1Q5VV63 1379 aa5.29□□□□□ -1.56
PDS5A-209ENST00000512643 A0A087WUV0 522 aaPredicted RBP5.28□□□□□ -1.56
PDS5A-209ENST00000512643 A0A1B0GVC2 190 aa5.28□□□□□ -1.56
PDS5A-209ENST00000512643 H0Y3Z8 333 aa5.28□□□□□ -1.56
PDS5A-209ENST00000512643 UNC5CO95185 931 aa5.28□□□□□ -1.56
PDS5A-209ENST00000512643 CNOT4O95628 575 aaKnown RBP5.28□□□□□ -1.56
PDS5A-209ENST00000512643 RARBP10826 455 aa5.28□□□□□ -1.56
PDS5A-209ENST00000512643 ZNF28P17035 718 aa5.28□□□□□ -1.56
PDS5A-209ENST00000512643 ITGB5P18084 799 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms