RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 KRT87PA6NCN2 255 aa11.28□□□□□ -0.6
CPNE4-209ENST00000512055 VWA5AO00534 786 aa11.28□□□□□ -0.6
CPNE4-209ENST00000512055 ARMCX4Q5H9R4 360 aa11.28□□□□□ -0.6
CPNE4-209ENST00000512055 NEK10Q6ZWH5 1172 aa11.28□□□□□ -0.6
CPNE4-209ENST00000512055 JAMLQ86YT9 394 aa11.28□□□□□ -0.6
CPNE4-209ENST00000512055 TMEM139Q8IV31 216 aa11.28□□□□□ -0.6
CPNE4-209ENST00000512055 CHST13Q8NET6 341 aa11.28□□□□□ -0.6
CPNE4-209ENST00000512055 DEPDC7Q96QD5 511 aa11.28□□□□□ -0.6
CPNE4-209ENST00000512055 MRIQ9BWK5 157 aa11.28□□□□□ -0.6
CPNE4-209ENST00000512055 FGFBP2Q9BYJ0 223 aa11.28□□□□□ -0.6
CPNE4-209ENST00000512055 DMAP1Q9NPF5 467 aaPredicted RBP11.28□□□□□ -0.6
CPNE4-209ENST00000512055 COL1A1P02452 1464 aaPredicted RBP11.28□□□□□ -0.6
CPNE4-209ENST00000512055 ZSCAN5CA6NGD5 496 aaPredicted RBP11.28□□□□□ -0.6
CPNE4-209ENST00000512055 ABATP80404 500 aa11.28□□□□□ -0.6
CPNE4-209ENST00000512055 DRP2Q13474 957 aa11.28□□□□□ -0.6
CPNE4-209ENST00000512055 MXD4Q14582 209 aaPredicted RBP11.28□□□□□ -0.6
CPNE4-209ENST00000512055 ARMC3Q5W041 872 aa11.28□□□□□ -0.6
CPNE4-209ENST00000512055 WDR93Q6P2C0 686 aa11.28□□□□□ -0.6
CPNE4-209ENST00000512055 CASKIN2Q8WXE0 1202 aa11.28□□□□□ -0.6
CPNE4-209ENST00000512055 ALKBH8Q96BT7 664 aaKnown RBP11.28□□□□□ -0.6
CPNE4-209ENST00000512055 CATSPER2Q96P56 530 aa11.28□□□□□ -0.6
CPNE4-209ENST00000512055 PRKAG2Q9UGJ0 569 aa11.28□□□□□ -0.6
CPNE4-209ENST00000512055 AGAP1Q9UPQ3 857 aa11.28□□□□□ -0.6
CPNE4-209ENST00000512055 ROBO3Q96MS0 1386 aa11.28□□□□□ -0.6
CPNE4-209ENST00000512055 COL14A1Q05707 1796 aaKnown RBP11.28□□□□□ -0.6
CPNE4-209ENST00000512055 ASB14A6NK59 587 aa11.28□□□□□ -0.6
CPNE4-209ENST00000512055 F5H423 210 aaPredicted RBP11.28□□□□□ -0.6
CPNE4-209ENST00000512055 CLASP2O75122 1294 aaKnown RBP11.28□□□□□ -0.6
CPNE4-209ENST00000512055 PHF2O75151 1096 aa11.28□□□□□ -0.6
CPNE4-209ENST00000512055 ATP12AP54707 1039 aa11.28□□□□□ -0.6
CPNE4-209ENST00000512055 IZUMO3Q5VZ72 239 aa11.28□□□□□ -0.6
CPNE4-209ENST00000512055 IYDQ6PHW0 289 aa11.28□□□□□ -0.6
CPNE4-209ENST00000512055 SLC47A2Q86VL8 602 aa11.28□□□□□ -0.6
CPNE4-209ENST00000512055 MCEEQ96PE7 176 aa11.28□□□□□ -0.6
CPNE4-209ENST00000512055 BTBD7Q9P203 1132 aa11.28□□□□□ -0.6
CPNE4-209ENST00000512055 PIPSLA2A3N6 862 aa11.27□□□□□ -0.6
CPNE4-209ENST00000512055 MAGEA13PA6NCF6 341 aa11.27□□□□□ -0.6
CPNE4-209ENST00000512055 H3BQF6 201 aa11.27□□□□□ -0.6
CPNE4-209ENST00000512055 MUTP22033 750 aa11.27□□□□□ -0.6
CPNE4-209ENST00000512055 ATXN3P54252 364 aaPredicted RBP11.27□□□□□ -0.6
CPNE4-209ENST00000512055 MDH1BQ5I0G3 518 aa11.27□□□□□ -0.6
CPNE4-209ENST00000512055 SYCP2LQ5T4T6 812 aa11.27□□□□□ -0.6
CPNE4-209ENST00000512055 C4orf19Q8IY42 314 aa11.27□□□□□ -0.6
CPNE4-209ENST00000512055 C2orf69Q8N8R5 385 aa11.27□□□□□ -0.6
CPNE4-209ENST00000512055 MDM1Q8TC05 714 aa11.27□□□□□ -0.6
CPNE4-209ENST00000512055 ARL8AQ96BM9 186 aa11.27□□□□□ -0.6
CPNE4-209ENST00000512055 IKZF4Q9H2S9 585 aa11.27□□□□□ -0.6
CPNE4-209ENST00000512055 CFAP99D6REC4 459 aa11.27□□□□□ -0.61
CPNE4-209ENST00000512055 TBC1D4O60343 1298 aa11.27□□□□□ -0.61
CPNE4-209ENST00000512055 KRT37O76014 449 aa11.27□□□□□ -0.61
CPNE4-209ENST00000512055 SNHG28P0DPA3 235 aa11.27□□□□□ -0.61
CPNE4-209ENST00000512055 FBXW4P57775 412 aa11.27□□□□□ -0.61
CPNE4-209ENST00000512055 KCNMA1Q12791 1236 aa11.27□□□□□ -0.61
CPNE4-209ENST00000512055 CBWD6Q4V339 395 aa11.27□□□□□ -0.61
CPNE4-209ENST00000512055 CBWD3Q5JTY5 395 aa11.27□□□□□ -0.61
CPNE4-209ENST00000512055 CBWD5Q5RIA9 395 aa11.27□□□□□ -0.61
CPNE4-209ENST00000512055 EFCAB12Q6NXP0 572 aa11.27□□□□□ -0.61
CPNE4-209ENST00000512055 RDM1Q8NG50 284 aa11.27□□□□□ -0.61
CPNE4-209ENST00000512055 FAF2Q96CS3 445 aa11.27□□□□□ -0.61
CPNE4-209ENST00000512055 SNF8Q96H20 258 aa11.27□□□□□ -0.61
CPNE4-209ENST00000512055 TLR10Q9BXR5 811 aa11.27□□□□□ -0.61
CPNE4-209ENST00000512055 RANBP17Q9H2T7 1088 aaKnown RBP11.27□□□□□ -0.61
CPNE4-209ENST00000512055 PRELID1Q9Y255 219 aa11.27□□□□□ -0.61
CPNE4-209ENST00000512055 AHCYL1O43865 530 aa11.27□□□□□ -0.61
CPNE4-209ENST00000512055 PBX1P40424 430 aa11.27□□□□□ -0.61
CPNE4-209ENST00000512055 NUP107P57740 925 aa11.27□□□□□ -0.61
CPNE4-209ENST00000512055 ARF5P84085 180 aa11.27□□□□□ -0.61
CPNE4-209ENST00000512055 DCTN2Q13561 401 aaKnown RBP11.27□□□□□ -0.61
CPNE4-209ENST00000512055 MAPK11Q15759 364 aa11.27□□□□□ -0.61
CPNE4-209ENST00000512055 SPOUT1Q5T280 376 aaKnown RBP11.27□□□□□ -0.61
CPNE4-209ENST00000512055 C1orf186Q6ZWK4 172 aa11.27□□□□□ -0.61
CPNE4-209ENST00000512055 UXS1Q8NBZ7 420 aa11.27□□□□□ -0.61
CPNE4-209ENST00000512055 ETNPPLQ8TBG4 499 aa11.27□□□□□ -0.61
CPNE4-209ENST00000512055 SMAD5Q99717 465 aaKnown RBP11.27□□□□□ -0.61
CPNE4-209ENST00000512055 SPON1Q9HCB6 807 aa11.27□□□□□ -0.61
CPNE4-209ENST00000512055 ASNSD1Q9NWL6 643 aa11.27□□□□□ -0.61
CPNE4-209ENST00000512055 NID2Q14112 1375 aa11.27□□□□□ -0.61
CPNE4-209ENST00000512055 KIAA0391O15091 583 aaKnown RBP11.27□□□□□ -0.61
CPNE4-209ENST00000512055 PSMD10O75832 226 aa11.27□□□□□ -0.61
CPNE4-209ENST00000512055 SASH3O75995 380 aa11.27□□□□□ -0.61
CPNE4-209ENST00000512055 CYP3A4P08684 503 aa11.27□□□□□ -0.61
CPNE4-209ENST00000512055 SPATA31C1P0DKV0 1188 aa11.27□□□□□ -0.61
CPNE4-209ENST00000512055 ADORA2BP29275 332 aa11.27□□□□□ -0.61
CPNE4-209ENST00000512055 GTF2H1P32780 548 aa11.27□□□□□ -0.61
CPNE4-209ENST00000512055 HADHAP40939 763 aa11.27□□□□□ -0.61
CPNE4-209ENST00000512055 MTM1Q13496 603 aa11.27□□□□□ -0.61
CPNE4-209ENST00000512055 LLGL2Q6P1M3 1020 aa11.27□□□□□ -0.61
CPNE4-209ENST00000512055 TATDN1Q6P1N9 297 aa11.27□□□□□ -0.61
CPNE4-209ENST00000512055 FAM193BQ96PV7 902 aaPredicted RBP11.27□□□□□ -0.61
CPNE4-209ENST00000512055 FAM96AQ9H5X1 160 aa11.27□□□□□ -0.61
CPNE4-209ENST00000512055 C5P01031 1676 aa11.27□□□□□ -0.61
CPNE4-209ENST00000512055 CYP3A7-CYP3A51PA0A087WV96 503 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 A0A1W2PRG6 482 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 GLI1P08151 1106 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 SUPT20HL2P0C7V6 817 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 HSPA1AP0DMV8 641 aaKnown RBP11.26□□□□□ -0.61
CPNE4-209ENST00000512055 HSPA1BP0DMV9 641 aaKnown RBP11.26□□□□□ -0.61
CPNE4-209ENST00000512055 PRLRP16471 622 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 CYP3A7P24462 503 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 ARSEP51690 589 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms