RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 PKMYT1Q99640 499 aa20.49■□□□□ 0.87
HMGCS1-206ENST00000511774 ZDHHC4Q9NPG8 344 aa20.49■□□□□ 0.87
HMGCS1-206ENST00000511774 GPSM3Q9Y4H4 160 aa20.49■□□□□ 0.87
HMGCS1-206ENST00000511774 FAM221BA6H8Z2 402 aa20.48■□□□□ 0.87
HMGCS1-206ENST00000511774 HCRTO43612 131 aa20.48■□□□□ 0.87
HMGCS1-206ENST00000511774 PLA2G4BP0C869 781 aa20.48■□□□□ 0.87
HMGCS1-206ENST00000511774 LMAN2Q12907 356 aa20.48■□□□□ 0.87
HMGCS1-206ENST00000511774 CCDC83Q8IWF9 413 aa20.48■□□□□ 0.87
HMGCS1-206ENST00000511774 CD302Q8IX05 232 aa20.48■□□□□ 0.87
HMGCS1-206ENST00000511774 DCP1BQ8IZD4 617 aaKnown RBP20.48■□□□□ 0.87
HMGCS1-206ENST00000511774 OR2I1PQ8NGU4 316 aa20.48■□□□□ 0.87
HMGCS1-206ENST00000511774 TRMT2BQ96GJ1 504 aaKnown RBP20.48■□□□□ 0.87
HMGCS1-206ENST00000511774 MYRFLQ96LU7 910 aa20.48■□□□□ 0.87
HMGCS1-206ENST00000511774 RAB34Q9BZG1 259 aa20.48■□□□□ 0.87
HMGCS1-206ENST00000511774 TMEM206Q9H813 350 aa20.48■□□□□ 0.87
HMGCS1-206ENST00000511774 DPP3Q9NY33 737 aa20.48■□□□□ 0.87
HMGCS1-206ENST00000511774 DERAQ9Y315 318 aa20.48■□□□□ 0.87
HMGCS1-206ENST00000511774 ASXL3Q9C0F0 2248 aa20.47■□□□□ 0.87
HMGCS1-206ENST00000511774 ASH1LQ9NR48 2969 aaKnown RBP20.47■□□□□ 0.87
HMGCS1-206ENST00000511774 TRAV19A0A0A6YYK7 116 aa20.47■□□□□ 0.87
HMGCS1-206ENST00000511774 SGK1O00141 431 aa20.47■□□□□ 0.87
HMGCS1-206ENST00000511774 TNFRSF10BO14763 440 aa20.47■□□□□ 0.87
HMGCS1-206ENST00000511774 CKMP06732 381 aa20.47■□□□□ 0.87
HMGCS1-206ENST00000511774 USP17L7P0C7H9 530 aa20.47■□□□□ 0.87
HMGCS1-206ENST00000511774 ITPKAP23677 461 aa20.47■□□□□ 0.87
HMGCS1-206ENST00000511774 ACAT1P24752 427 aaKnown RBP20.47■□□□□ 0.87
HMGCS1-206ENST00000511774 NEK4P51957 841 aa20.47■□□□□ 0.87
HMGCS1-206ENST00000511774 WNT7BP56706 349 aa20.47■□□□□ 0.87
HMGCS1-206ENST00000511774 MAP7D1Q3KQU3 841 aa20.47■□□□□ 0.87
HMGCS1-206ENST00000511774 EMC10Q5UCC4 262 aa20.47■□□□□ 0.87
HMGCS1-206ENST00000511774 SYT12Q8IV01 421 aa20.47■□□□□ 0.87
HMGCS1-206ENST00000511774 ALLCQ8N6M5 410 aa20.47■□□□□ 0.87
HMGCS1-206ENST00000511774 EXOC4Q96A65 974 aa20.47■□□□□ 0.87
HMGCS1-206ENST00000511774 FAM84AQ96KN4 292 aa20.47■□□□□ 0.87
HMGCS1-206ENST00000511774 FIZ1Q96SL8 496 aa20.47■□□□□ 0.87
HMGCS1-206ENST00000511774 REEP2Q9BRK0 252 aa20.47■□□□□ 0.87
HMGCS1-206ENST00000511774 NUSAP1Q9BXS6 441 aaKnown RBP20.47■□□□□ 0.87
HMGCS1-206ENST00000511774 SLC32A1Q9H598 525 aa20.47■□□□□ 0.87
HMGCS1-206ENST00000511774 NOL7Q9UMY1 257 aaKnown RBP20.47■□□□□ 0.87
HMGCS1-206ENST00000511774 KPNA7A9QM74 516 aa20.46■□□□□ 0.87
HMGCS1-206ENST00000511774 UPK3BL1B0FP48 263 aa20.46■□□□□ 0.87
HMGCS1-206ENST00000511774 UPK3BL2E5RIL1 263 aa20.46■□□□□ 0.87
HMGCS1-206ENST00000511774 SLC6A11P48066 632 aa20.46■□□□□ 0.87
HMGCS1-206ENST00000511774 TMEM119Q4V9L6 283 aa20.46■□□□□ 0.87
HMGCS1-206ENST00000511774 PEAR1Q5VY43 1037 aaPredicted RBP20.46■□□□□ 0.87
HMGCS1-206ENST00000511774 SLC23A3Q6PIS1 610 aa20.46■□□□□ 0.87
HMGCS1-206ENST00000511774 CRELD2Q6UXH1 353 aaPredicted RBP20.46■□□□□ 0.87
HMGCS1-206ENST00000511774 LPCAT2Q7L5N7 544 aa20.46■□□□□ 0.87
HMGCS1-206ENST00000511774 OSTM1Q86WC4 334 aa20.46■□□□□ 0.87
HMGCS1-206ENST00000511774 PDCL2Q8N4E4 241 aa20.46■□□□□ 0.87
HMGCS1-206ENST00000511774 IL17RCQ8NAC3 791 aa20.46■□□□□ 0.87
HMGCS1-206ENST00000511774 TXNDC5Q8NBS9 432 aaKnown RBP20.46■□□□□ 0.87
HMGCS1-206ENST00000511774 LARSQ9P2J5 1176 aaKnown RBP20.46■□□□□ 0.87
HMGCS1-206ENST00000511774 KCNG1Q9UIX4 513 aa20.46■□□□□ 0.87
HMGCS1-206ENST00000511774 PILRBQ9UKJ0 227 aa20.46■□□□□ 0.87
HMGCS1-206ENST00000511774 CIZ1Q9ULV3 898 aaPredicted RBP20.46■□□□□ 0.87
HMGCS1-206ENST00000511774 L1RE1Q9UN81 338 aa20.46■□□□□ 0.87
HMGCS1-206ENST00000511774 C2CD2Q9Y426 696 aa20.46■□□□□ 0.87
HMGCS1-206ENST00000511774 K7ENM7 598 aa20.45■□□□□ 0.86
HMGCS1-206ENST00000511774 SCAMP3O14828 347 aaKnown RBP20.45■□□□□ 0.86
HMGCS1-206ENST00000511774 KLF8O95600 359 aaPredicted RBP20.45■□□□□ 0.86
HMGCS1-206ENST00000511774 CYP17A1P05093 508 aa20.45■□□□□ 0.86
HMGCS1-206ENST00000511774 TCF3P15923 654 aa20.45■□□□□ 0.86
HMGCS1-206ENST00000511774 PRPHP41219 470 aa20.45■□□□□ 0.86
HMGCS1-206ENST00000511774 DTHD1Q6ZMT9 781 aa20.45■□□□□ 0.86
HMGCS1-206ENST00000511774 RAB44Q7Z6P3 723 aaPredicted RBP20.45■□□□□ 0.86
HMGCS1-206ENST00000511774 C12orf40Q86WS4 652 aa20.45■□□□□ 0.86
HMGCS1-206ENST00000511774 LEO1Q8WVC0 666 aaPredicted RBP20.45■□□□□ 0.86
HMGCS1-206ENST00000511774 ASB7Q9H672 318 aa20.45■□□□□ 0.86
HMGCS1-206ENST00000511774 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.45■□□□□ 0.86
HMGCS1-206ENST00000511774 ADAM23O75077 832 aa20.44■□□□□ 0.86
HMGCS1-206ENST00000511774 CD59P13987 128 aa20.44■□□□□ 0.86
HMGCS1-206ENST00000511774 TSPY1Q01534 308 aa20.44■□□□□ 0.86
HMGCS1-206ENST00000511774 NR1H3Q13133 447 aa20.44■□□□□ 0.86
HMGCS1-206ENST00000511774 GNL2Q13823 731 aaKnown RBP20.44■□□□□ 0.86
HMGCS1-206ENST00000511774 PDZD3Q86UT5 571 aa20.44■□□□□ 0.86
HMGCS1-206ENST00000511774 DEFB119Q8N690 84 aa20.44■□□□□ 0.86
HMGCS1-206ENST00000511774 CAMK1GQ96NX5 476 aa20.44■□□□□ 0.86
HMGCS1-206ENST00000511774 BBC3Q96PG8 261 aaPredicted RBP20.44■□□□□ 0.86
HMGCS1-206ENST00000511774 UXTQ9UBK9 157 aaPredicted RBP20.44■□□□□ 0.86
HMGCS1-206ENST00000511774 GTF3C4Q9UKN8 822 aa20.44■□□□□ 0.86
HMGCS1-206ENST00000511774 ARHGAP26Q9UNA1 814 aa20.44■□□□□ 0.86
HMGCS1-206ENST00000511774 H0YCG3 227 aa20.43■□□□□ 0.86
HMGCS1-206ENST00000511774 MAP3K13O43283 966 aa20.43■□□□□ 0.86
HMGCS1-206ENST00000511774 ZIC2O95409 532 aaPredicted RBP20.43■□□□□ 0.86
HMGCS1-206ENST00000511774 NFATC1O95644 943 aa20.43■□□□□ 0.86
HMGCS1-206ENST00000511774 CFIP05156 583 aa20.43■□□□□ 0.86
HMGCS1-206ENST00000511774 TIE1P35590 1138 aa20.43■□□□□ 0.86
HMGCS1-206ENST00000511774 KIR2DL1P43626 348 aaPredicted RBP20.43■□□□□ 0.86
HMGCS1-206ENST00000511774 ZNF131P52739 623 aa20.43■□□□□ 0.86
HMGCS1-206ENST00000511774 MRPS21P82921 87 aaKnown RBP20.43■□□□□ 0.86
HMGCS1-206ENST00000511774 SCAPQ12770 1279 aa20.43■□□□□ 0.86
HMGCS1-206ENST00000511774 NFE2Q16621 373 aaPredicted RBP20.43■□□□□ 0.86
HMGCS1-206ENST00000511774 COL28A1Q2UY09 1125 aa20.43■□□□□ 0.86
HMGCS1-206ENST00000511774 INTS6LQ5JSJ4 861 aaKnown RBP20.43■□□□□ 0.86
HMGCS1-206ENST00000511774 LYSMD4Q5XG99 296 aa20.43■□□□□ 0.86
HMGCS1-206ENST00000511774 ZSWIM2Q8NEG5 633 aa20.43■□□□□ 0.86
HMGCS1-206ENST00000511774 HMGB4Q8WW32 186 aa20.43■□□□□ 0.86
HMGCS1-206ENST00000511774 GTPBP2Q9BX10 602 aaKnown RBP20.43■□□□□ 0.86
HMGCS1-206ENST00000511774 CAPN10Q9HC96 672 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms