RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 KCNA3P22001 575 aa6.31□□□□□ -1.4
HMGB1P47-201ENST00000511281 PPIFP30405 207 aaKnown RBP6.31□□□□□ -1.4
HMGB1P47-201ENST00000511281 GCLCP48506 637 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P47-201ENST00000511281 CDK7P50613 346 aa6.31□□□□□ -1.4
HMGB1P47-201ENST00000511281 PAPOLAP51003 745 aaKnown RBP6.31□□□□□ -1.4
HMGB1P47-201ENST00000511281 ZNF134P52741 427 aa6.31□□□□□ -1.4
HMGB1P47-201ENST00000511281 AP2B1P63010 937 aa6.31□□□□□ -1.4
HMGB1P47-201ENST00000511281 VAMP2P63027 116 aa6.31□□□□□ -1.4
HMGB1P47-201ENST00000511281 MPP1Q00013 466 aa6.31□□□□□ -1.4
HMGB1P47-201ENST00000511281 WDR78Q5VTH9 848 aa6.31□□□□□ -1.4
HMGB1P47-201ENST00000511281 TAF2Q6P1X5 1199 aa6.31□□□□□ -1.4
HMGB1P47-201ENST00000511281 ZNF280BQ86YH2 543 aa6.31□□□□□ -1.4
HMGB1P47-201ENST00000511281 CPOQ8IVL8 374 aa6.31□□□□□ -1.4
HMGB1P47-201ENST00000511281 FTSJ3Q8IY81 847 aaKnown RBP6.31□□□□□ -1.4
HMGB1P47-201ENST00000511281 Q8NA96 180 aa6.31□□□□□ -1.4
HMGB1P47-201ENST00000511281 BPIFB1Q8TDL5 484 aa6.31□□□□□ -1.4
HMGB1P47-201ENST00000511281 MARS2Q96GW9 593 aaKnown RBP6.31□□□□□ -1.4
HMGB1P47-201ENST00000511281 NEU1Q99519 415 aa6.31□□□□□ -1.4
HMGB1P47-201ENST00000511281 GGA3Q9NZ52 723 aa6.31□□□□□ -1.4
HMGB1P47-201ENST00000511281 TMOD4Q9NZQ9 345 aa6.31□□□□□ -1.4
HMGB1P47-201ENST00000511281 POGKQ9P215 609 aa6.31□□□□□ -1.4
HMGB1P47-201ENST00000511281 LPAR3Q9UBY5 353 aa6.31□□□□□ -1.4
HMGB1P47-201ENST00000511281 FEM1BQ9UK73 627 aa6.31□□□□□ -1.4
HMGB1P47-201ENST00000511281 CDYLQ9Y232 598 aa6.31□□□□□ -1.4
HMGB1P47-201ENST00000511281 RAD54BQ9Y620 910 aa6.31□□□□□ -1.4
HMGB1P47-201ENST00000511281 DIRC3C9JPN6 131 aa6.3□□□□□ -1.4
HMGB1P47-201ENST00000511281 CD3EAPO15446 510 aaKnown RBP6.3□□□□□ -1.4
HMGB1P47-201ENST00000511281 PIAS2O75928 621 aa6.3□□□□□ -1.4
HMGB1P47-201ENST00000511281 TK1P04183 234 aa6.3□□□□□ -1.4
HMGB1P47-201ENST00000511281 ANXA6P08133 673 aa6.3□□□□□ -1.4
HMGB1P47-201ENST00000511281 KCNA2P16389 499 aa6.3□□□□□ -1.4
HMGB1P47-201ENST00000511281 KCNC1P48547 511 aa6.3□□□□□ -1.4
HMGB1P47-201ENST00000511281 PXNP49023 591 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P47-201ENST00000511281 RABGGTBP53611 331 aa6.3□□□□□ -1.4
HMGB1P47-201ENST00000511281 ALDH18A1P54886 795 aaKnown RBP6.3□□□□□ -1.4
HMGB1P47-201ENST00000511281 EIF5P55010 431 aaKnown RBP6.3□□□□□ -1.4
HMGB1P47-201ENST00000511281 MYO1EQ12965 1108 aa6.3□□□□□ -1.4
HMGB1P47-201ENST00000511281 TIGD6Q17RP2 521 aa6.3□□□□□ -1.4
HMGB1P47-201ENST00000511281 TCERG1LQ5VWI1 586 aa6.3□□□□□ -1.4
HMGB1P47-201ENST00000511281 KCTD20Q7Z5Y7 419 aa6.3□□□□□ -1.4
HMGB1P47-201ENST00000511281 TAX1BP1Q86VP1 789 aa6.3□□□□□ -1.4
HMGB1P47-201ENST00000511281 ELOA2Q8IYF1 753 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P47-201ENST00000511281 NRSN1Q8IZ57 195 aa6.3□□□□□ -1.4
HMGB1P47-201ENST00000511281 MIEF2Q96C03 454 aa6.3□□□□□ -1.4
HMGB1P47-201ENST00000511281 LRRC37BQ96QE4 947 aa6.3□□□□□ -1.4
HMGB1P47-201ENST00000511281 NUDT22Q9BRQ3 303 aa6.3□□□□□ -1.4
HMGB1P47-201ENST00000511281 PTDSS2Q9BVG9 487 aa6.3□□□□□ -1.4
HMGB1P47-201ENST00000511281 TTYH3Q9C0H2 523 aa6.3□□□□□ -1.4
HMGB1P47-201ENST00000511281 ZCWPW1Q9H0M4 648 aa6.3□□□□□ -1.4
HMGB1P47-201ENST00000511281 HSFX1Q9UBD0 423 aa6.3□□□□□ -1.4
HMGB1P47-201ENST00000511281 HPSEQ9Y251 543 aa6.3□□□□□ -1.4
HMGB1P47-201ENST00000511281 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P47-201ENST00000511281 ITIH6Q6UXX5 1313 aa6.29□□□□□ -1.4
HMGB1P47-201ENST00000511281 FCHO1O14526 889 aa6.29□□□□□ -1.4
HMGB1P47-201ENST00000511281 LAMTOR5O43504 91 aa6.29□□□□□ -1.4
HMGB1P47-201ENST00000511281 VPS4BO75351 444 aa6.29□□□□□ -1.4
HMGB1P47-201ENST00000511281 SUN1O94901 812 aa6.29□□□□□ -1.4
HMGB1P47-201ENST00000511281 TNFAIP3P21580 790 aa6.29□□□□□ -1.4
HMGB1P47-201ENST00000511281 LILRA4P59901 499 aa6.29□□□□□ -1.4
HMGB1P47-201ENST00000511281 KRT17Q04695 432 aa6.29□□□□□ -1.4
HMGB1P47-201ENST00000511281 FOXL1Q12952 345 aa6.29□□□□□ -1.4
HMGB1P47-201ENST00000511281 KCNAB1Q14722 419 aa6.29□□□□□ -1.4
HMGB1P47-201ENST00000511281 ABLIM2Q6H8Q1 611 aa6.29□□□□□ -1.4
HMGB1P47-201ENST00000511281 C1orf122Q6ZSJ8 110 aa6.29□□□□□ -1.4
HMGB1P47-201ENST00000511281 ANKRD35Q8N283 1001 aa6.29□□□□□ -1.4
HMGB1P47-201ENST00000511281 FAM109AQ8N4B1 249 aa6.29□□□□□ -1.4
HMGB1P47-201ENST00000511281 OR6Y1Q8NGX8 325 aa6.29□□□□□ -1.4
HMGB1P47-201ENST00000511281 MBD3L2Q8NHZ7 208 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P47-201ENST00000511281 ZNF483Q8TF39 744 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P47-201ENST00000511281 TMEM176AQ96HP8 235 aa6.29□□□□□ -1.4
HMGB1P47-201ENST00000511281 SEC62Q99442 399 aaKnown RBP6.29□□□□□ -1.4
HMGB1P47-201ENST00000511281 SLC25A32Q9H2D1 315 aa6.29□□□□□ -1.4
HMGB1P47-201ENST00000511281 RNPEPQ9H4A4 650 aa6.29□□□□□ -1.4
HMGB1P47-201ENST00000511281 UBN1Q9NPG3 1134 aa6.29□□□□□ -1.4
HMGB1P47-201ENST00000511281 RIC8AQ9NPQ8 531 aa6.29□□□□□ -1.4
HMGB1P47-201ENST00000511281 DNAJB11Q9UBS4 358 aa6.29□□□□□ -1.4
HMGB1P47-201ENST00000511281 A0A1W2PS29 197 aa6.28□□□□□ -1.4
HMGB1P47-201ENST00000511281 TISP43B9A030 160 aa6.28□□□□□ -1.4
HMGB1P47-201ENST00000511281 CCNT2O60583 730 aaKnown RBP6.28□□□□□ -1.4
HMGB1P47-201ENST00000511281 VIPP01282 170 aa6.28□□□□□ -1.4
HMGB1P47-201ENST00000511281 PRKCBP05771 671 aa6.28□□□□□ -1.4
HMGB1P47-201ENST00000511281 CENPBP07199 599 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P47-201ENST00000511281 MCM2P49736 904 aa6.28□□□□□ -1.4
HMGB1P47-201ENST00000511281 ANXA11P50995 505 aaKnown RBP6.28□□□□□ -1.4
HMGB1P47-201ENST00000511281 TIAL1Q01085 375 aaKnown RBP eCLIP6.28□□□□□ -1.4
HMGB1P47-201ENST00000511281 SCAPQ12770 1279 aa6.28□□□□□ -1.4
HMGB1P47-201ENST00000511281 TTC22Q5TAA0 569 aa6.28□□□□□ -1.4
HMGB1P47-201ENST00000511281 ATPAF1Q5TC12 328 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P47-201ENST00000511281 CACHD1Q5VU97 1274 aa6.28□□□□□ -1.4
HMGB1P47-201ENST00000511281 SFRP4Q6FHJ7 346 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P47-201ENST00000511281 LAYNQ6UX15 382 aa6.28□□□□□ -1.4
HMGB1P47-201ENST00000511281 RINLQ6ZS11 566 aa6.28□□□□□ -1.4
HMGB1P47-201ENST00000511281 RAB11FIP2Q7L804 512 aa6.28□□□□□ -1.4
HMGB1P47-201ENST00000511281 MAATS1Q7Z4T9 603 aa6.28□□□□□ -1.4
HMGB1P47-201ENST00000511281 ANKS1BQ7Z6G8 1248 aa6.28□□□□□ -1.4
HMGB1P47-201ENST00000511281 RASGRP3Q8IV61 690 aa6.28□□□□□ -1.4
HMGB1P47-201ENST00000511281 CCDC117Q8IWD4 279 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P47-201ENST00000511281 Q8N3U1 123 aa6.28□□□□□ -1.4
HMGB1P47-201ENST00000511281 ESX1Q8N693 406 aa6.28□□□□□ -1.4
HMGB1P47-201ENST00000511281 SCAMP5Q8TAC9 235 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms