RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 COG5Q9UP83 839 aa11.05□□□□□ -0.64
NR1I3-227ENST00000510951 USP15Q9Y4E8 981 aaPredicted RBP11.05□□□□□ -0.64
NR1I3-227ENST00000510951 C5orf42Q9H799 3197 aa11.05□□□□□ -0.64
NR1I3-227ENST00000510951 HELZP42694 1942 aaKnown RBP11.04□□□□□ -0.64
NR1I3-227ENST00000510951 GRXCR2A6NFK2 248 aa11.04□□□□□ -0.64
NR1I3-227ENST00000510951 F8VP50 259 aa11.04□□□□□ -0.64
NR1I3-227ENST00000510951 F8VZ95 297 aa11.04□□□□□ -0.64
NR1I3-227ENST00000510951 FOXN3O00409 490 aaPredicted RBP11.04□□□□□ -0.64
NR1I3-227ENST00000510951 CYP26A1O43174 497 aa11.04□□□□□ -0.64
NR1I3-227ENST00000510951 AP5Z1O43299 807 aa11.04□□□□□ -0.64
NR1I3-227ENST00000510951 THAP12O43422 761 aa11.04□□□□□ -0.64
NR1I3-227ENST00000510951 XYLBO75191 536 aa11.04□□□□□ -0.64
NR1I3-227ENST00000510951 HNRNPA1P09651 372 aaKnown RBP eCLIP11.04□□□□□ -0.64
NR1I3-227ENST00000510951 FAM200BP0CF97 657 aa11.04□□□□□ -0.64
NR1I3-227ENST00000510951 SP100P23497 879 aaPredicted RBP11.04□□□□□ -0.64
NR1I3-227ENST00000510951 ANXA13P27216 316 aa11.04□□□□□ -0.64
NR1I3-227ENST00000510951 HOXA9P31269 272 aa11.04□□□□□ -0.64
NR1I3-227ENST00000510951 MAGEA11P43364 429 aa11.04□□□□□ -0.64
NR1I3-227ENST00000510951 TUFMP49411 452 aaKnown RBP11.04□□□□□ -0.64
NR1I3-227ENST00000510951 KCNQ1P51787 676 aa11.04□□□□□ -0.64
NR1I3-227ENST00000510951 EPHB3P54753 998 aa11.04□□□□□ -0.64
NR1I3-227ENST00000510951 MAP3K7CLP57077 242 aa11.04□□□□□ -0.64
NR1I3-227ENST00000510951 NTHL1P78549 312 aa11.04□□□□□ -0.64
NR1I3-227ENST00000510951 IFRD2Q12894 506 aaPredicted RBP11.04□□□□□ -0.64
NR1I3-227ENST00000510951 PLD1Q13393 1074 aa11.04□□□□□ -0.64
NR1I3-227ENST00000510951 SMAD4Q13485 552 aaKnown RBP11.04□□□□□ -0.64
NR1I3-227ENST00000510951 NR1I3Q14994 352 aa11.04□□□□□ -0.64
NR1I3-227ENST00000510951 VEPH1Q14D04 833 aa11.04□□□□□ -0.64
NR1I3-227ENST00000510951 UVSSAQ2YD98 709 aa11.04□□□□□ -0.64
NR1I3-227ENST00000510951 GRASPQ7Z6J2 395 aaPredicted RBP11.04□□□□□ -0.64
NR1I3-227ENST00000510951 GPR149Q86SP6 731 aa11.04□□□□□ -0.64
NR1I3-227ENST00000510951 ELMOD1Q8N336 334 aa11.04□□□□□ -0.64
NR1I3-227ENST00000510951 CMASQ8NFW8 434 aaPredicted RBP11.04□□□□□ -0.64
NR1I3-227ENST00000510951 CYFIP2Q96F07 1278 aa11.04□□□□□ -0.64
NR1I3-227ENST00000510951 SPAG5Q96R06 1193 aa11.04□□□□□ -0.64
NR1I3-227ENST00000510951 CORO1BQ9BR76 489 aa11.04□□□□□ -0.64
NR1I3-227ENST00000510951 NAA15Q9BXJ9 866 aaKnown RBP11.04□□□□□ -0.64
NR1I3-227ENST00000510951 ADAM7Q9H2U9 754 aa11.04□□□□□ -0.64
NR1I3-227ENST00000510951 FAM124BQ9H5Z6 455 aaPredicted RBP11.04□□□□□ -0.64
NR1I3-227ENST00000510951 XIRP2A4UGR9 3374 aa11.03□□□□□ -0.64
NR1I3-227ENST00000510951 A0A1W2PQC6 194 aa11.03□□□□□ -0.64
NR1I3-227ENST00000510951 M0QYV0 167 aa11.03□□□□□ -0.64
NR1I3-227ENST00000510951 O00370 1275 aa11.03□□□□□ -0.64
NR1I3-227ENST00000510951 TRIM66O15016 1216 aa11.03□□□□□ -0.64
NR1I3-227ENST00000510951 CBFA2T2O43439 604 aa11.03□□□□□ -0.64
NR1I3-227ENST00000510951 MBTPS2O43462 519 aa11.03□□□□□ -0.64
NR1I3-227ENST00000510951 BEST1O76090 585 aa11.03□□□□□ -0.64
NR1I3-227ENST00000510951 GFPT2O94808 682 aa11.03□□□□□ -0.64
NR1I3-227ENST00000510951 TPM3P06753 285 aa11.03□□□□□ -0.64
NR1I3-227ENST00000510951 PAEPP09466 180 aa11.03□□□□□ -0.64
NR1I3-227ENST00000510951 VDRP11473 427 aa11.03□□□□□ -0.64
NR1I3-227ENST00000510951 IL9P15248 144 aa11.03□□□□□ -0.64
NR1I3-227ENST00000510951 GNA15P30679 374 aa11.03□□□□□ -0.64
NR1I3-227ENST00000510951 RPL10AP62906 217 aaKnown RBP11.03□□□□□ -0.64
NR1I3-227ENST00000510951 ITIH3Q06033 890 aa11.03□□□□□ -0.64
NR1I3-227ENST00000510951 MTMR3Q13615 1198 aa11.03□□□□□ -0.64
NR1I3-227ENST00000510951 TAF12Q16514 161 aa11.03□□□□□ -0.64
NR1I3-227ENST00000510951 LEXMQ3ZCV2 418 aa11.03□□□□□ -0.64
NR1I3-227ENST00000510951 PTCRAQ6ISU1 281 aaPredicted RBP11.03□□□□□ -0.64
NR1I3-227ENST00000510951 VSTM1Q6UX27 236 aa11.03□□□□□ -0.64
NR1I3-227ENST00000510951 CACNA2D4Q7Z3S7 1137 aa11.03□□□□□ -0.64
NR1I3-227ENST00000510951 HS6ST3Q8IZP7 471 aa11.03□□□□□ -0.64
NR1I3-227ENST00000510951 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.03□□□□□ -0.64
NR1I3-227ENST00000510951 KCNK16Q96T55 309 aa11.03□□□□□ -0.64
NR1I3-227ENST00000510951 HNRNPABQ99729 332 aaKnown RBP11.03□□□□□ -0.64
NR1I3-227ENST00000510951 SMOQ99835 787 aa11.03□□□□□ -0.64
NR1I3-227ENST00000510951 ZSWIM1Q9BR11 485 aa11.03□□□□□ -0.64
NR1I3-227ENST00000510951 STK33Q9BYT3 514 aa11.03□□□□□ -0.64
NR1I3-227ENST00000510951 POMKQ9H5K3 350 aa11.03□□□□□ -0.64
NR1I3-227ENST00000510951 ZNF334Q9HCZ1 680 aaPredicted RBP11.03□□□□□ -0.64
NR1I3-227ENST00000510951 DMAP1Q9NPF5 467 aaPredicted RBP11.03□□□□□ -0.64
NR1I3-227ENST00000510951 DNMT3BQ9UBC3 853 aaKnown RBP11.03□□□□□ -0.64
NR1I3-227ENST00000510951 HSFX1Q9UBD0 423 aa11.03□□□□□ -0.64
NR1I3-227ENST00000510951 TSPAN16Q9UKR8 245 aa11.03□□□□□ -0.64
NR1I3-227ENST00000510951 MAGED2Q9UNF1 606 aaPredicted RBP11.03□□□□□ -0.64
NR1I3-227ENST00000510951 CNTN6Q9UQ52 1028 aa11.03□□□□□ -0.64
NR1I3-227ENST00000510951 NUP210Q8TEM1 1887 aaPredicted RBP11.03□□□□□ -0.64
NR1I3-227ENST00000510951 CLUHO75153 1309 aa11.03□□□□□ -0.64
NR1I3-227ENST00000510951 FAM170AA1A519 330 aa11.02□□□□□ -0.65
NR1I3-227ENST00000510951 SLC38A8A6NNN8 435 aa11.02□□□□□ -0.65
NR1I3-227ENST00000510951 MICAL2O94851 1124 aa11.02□□□□□ -0.65
NR1I3-227ENST00000510951 RHOP08100 348 aa11.02□□□□□ -0.65
NR1I3-227ENST00000510951 MYL4P12829 197 aa11.02□□□□□ -0.65
NR1I3-227ENST00000510951 NPR3P17342 541 aa11.02□□□□□ -0.65
NR1I3-227ENST00000510951 PBX1P40424 430 aa11.02□□□□□ -0.65
NR1I3-227ENST00000510951 JAM2P57087 298 aa11.02□□□□□ -0.65
NR1I3-227ENST00000510951 ARID5AQ03989 594 aa11.02□□□□□ -0.65
NR1I3-227ENST00000510951 CBX2Q14781 532 aaPredicted RBP11.02□□□□□ -0.65
NR1I3-227ENST00000510951 PABPC1LQ4VXU2 614 aaKnown RBP11.02□□□□□ -0.65
NR1I3-227ENST00000510951 ATAT1Q5SQI0 421 aa11.02□□□□□ -0.65
NR1I3-227ENST00000510951 ARHGAP17Q68EM7 881 aa11.02□□□□□ -0.65
NR1I3-227ENST00000510951 SARM1Q6SZW1 724 aa11.02□□□□□ -0.65
NR1I3-227ENST00000510951 CLEC20AQ6ZU45 233 aa11.02□□□□□ -0.65
NR1I3-227ENST00000510951 RTL10Q7L3V2 364 aa11.02□□□□□ -0.65
NR1I3-227ENST00000510951 GET4Q7L5D6 327 aaPredicted RBP11.02□□□□□ -0.65
NR1I3-227ENST00000510951 GPRIN1Q7Z2K8 1008 aa11.02□□□□□ -0.65
NR1I3-227ENST00000510951 SLC47A2Q86VL8 602 aa11.02□□□□□ -0.65
NR1I3-227ENST00000510951 TTC30AQ86WT1 665 aa11.02□□□□□ -0.65
NR1I3-227ENST00000510951 FAM71AQ8IYT1 594 aa11.02□□□□□ -0.65
NR1I3-227ENST00000510951 ZMIZ2Q8NF64 920 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms