RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 PABPC5Q96DU9 382 aaKnown RBP5.37□□□□□ -1.55
PHF3-210ENST00000509876 ERGIC2Q96RQ1 377 aa5.37□□□□□ -1.55
PHF3-210ENST00000509876 DPH5Q9H2P9 285 aa5.37□□□□□ -1.55
PHF3-210ENST00000509876 ADAMTS5Q9UNA0 930 aa5.37□□□□□ -1.55
PHF3-210ENST00000509876 USP20Q9Y2K6 914 aa5.37□□□□□ -1.55
PHF3-210ENST00000509876 SHANK3Q9BYB0 1731 aa5.37□□□□□ -1.55
PHF3-210ENST00000509876 TIMP1P01033 207 aa5.37□□□□□ -1.55
PHF3-210ENST00000509876 SAT1P21673 171 aa5.37□□□□□ -1.55
PHF3-210ENST00000509876 CCR1P32246 355 aa5.37□□□□□ -1.55
PHF3-210ENST00000509876 DENND5BQ6ZUT9 1274 aa5.37□□□□□ -1.55
PHF3-210ENST00000509876 RAPH1Q70E73 1250 aa5.37□□□□□ -1.55
PHF3-210ENST00000509876 GET4Q7L5D6 327 aaPredicted RBP5.37□□□□□ -1.55
PHF3-210ENST00000509876 SDCCAG8Q86SQ7 713 aaPredicted RBP5.37□□□□□ -1.55
PHF3-210ENST00000509876 NOP9Q86U38 636 aaKnown RBP5.37□□□□□ -1.55
PHF3-210ENST00000509876 SPPL2BQ8TCT7 592 aa5.37□□□□□ -1.55
PHF3-210ENST00000509876 MYLPFQ96A32 169 aa5.37□□□□□ -1.55
PHF3-210ENST00000509876 DNMT3LQ9UJW3 386 aa5.37□□□□□ -1.55
PHF3-210ENST00000509876 NR2E1Q9Y466 385 aa5.37□□□□□ -1.55
PHF3-210ENST00000509876 I3L4J1 428 aa5.37□□□□□ -1.55
PHF3-210ENST00000509876 MICAL2O94851 1124 aa5.37□□□□□ -1.55
PHF3-210ENST00000509876 ASS1P00966 412 aaKnown RBP5.37□□□□□ -1.55
PHF3-210ENST00000509876 ATP5C1P36542 298 aaKnown RBP5.37□□□□□ -1.55
PHF3-210ENST00000509876 MTFR1Q15390 333 aa5.37□□□□□ -1.55
PHF3-210ENST00000509876 BOLA3Q53S33 107 aa5.37□□□□□ -1.55
PHF3-210ENST00000509876 CASP10Q92851 521 aa5.37□□□□□ -1.55
PHF3-210ENST00000509876 SNX27Q96L92 541 aa5.37□□□□□ -1.55
PHF3-210ENST00000509876 VPS28Q9UK41 221 aa5.37□□□□□ -1.55
PHF3-210ENST00000509876 LRP5O75197 1615 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 CCDC130P13994 396 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 CYP11B1P15538 503 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 GUCY2FP51841 1108 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 IRX5P78411 483 aaPredicted RBP5.36□□□□□ -1.55
PHF3-210ENST00000509876 DR1Q01658 176 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 TRIM32Q13049 653 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 ERCC6LQ2NKX8 1250 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 C6orf118Q5T5N4 469 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 TIGD7Q6NT04 549 aaPredicted RBP5.36□□□□□ -1.55
PHF3-210ENST00000509876 TTI2Q6NXR4 508 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 MICALCLQ6ZW33 695 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 HDXQ7Z353 690 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 PPP4R1Q8TF05 950 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 RABGGTAQ92696 567 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 MBOAT7Q96N66 472 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 NUDCD1Q96RS6 583 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 RAD9AQ99638 391 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 HEMGNQ9BXL5 484 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 RSPH14Q9UHP6 348 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 MYH1P12882 1939 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 SMIM28A0A1B0GU29 152 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 ASMTLO95671 621 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 HSPA8P11142 646 aaKnown RBP5.36□□□□□ -1.55
PHF3-210ENST00000509876 OR1D2P34982 312 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 TNFSF9P41273 254 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 ADIGQ0VDE8 80 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 NAB2Q15742 525 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 PDE12Q6L8Q7 609 aaKnown RBP5.36□□□□□ -1.55
PHF3-210ENST00000509876 GJB7Q6PEY0 223 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 SLFN11Q7Z7L1 901 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 NUP93Q8N1F7 819 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 PPHLN1Q8NEY8 458 aaKnown RBP5.36□□□□□ -1.55
PHF3-210ENST00000509876 DEPDC1BQ8WUY9 529 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 CFAP36Q96G28 342 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 CARD6Q9BX69 1037 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 CIPCQ9C0C6 399 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 COL24A1Q17RW2 1714 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 NCK2O43639 380 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 ADH1CP00326 375 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 FGGP02679 453 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 INHBAP08476 426 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 TMEM253P0C7T8 217 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 RENBPP51606 427 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 PDE1BQ01064 536 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 NR1I3Q14994 352 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 BMT2Q1RMZ1 405 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 NT5DC1Q5TFE4 455 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 HHATQ5VTY9 493 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 EEF1DP3Q658K8 133 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 NUGGCQ68CJ6 796 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 SLC9A9Q8IVB4 645 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 PFDN4Q9NQP4 134 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 CCL16O15467 120 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 KDM1AO60341 852 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 ALDH1A2O94788 518 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 SP2Q02086 613 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 ASPHQ12797 758 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 IL17AQ16552 155 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 P3H1Q32P28 736 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 FYB2Q5VWT5 728 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 TAS2R42Q7RTR8 314 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 FAM228AQ86W67 206 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 PDIK1LQ8N165 341 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 SNX19Q92543 992 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 KRT35Q92764 455 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 UBXN6Q9BZV1 441 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 STN1Q9H668 368 aaKnown RBP5.36□□□□□ -1.55
PHF3-210ENST00000509876 MRPS17Q9Y2R5 130 aaKnown RBP5.36□□□□□ -1.55
PHF3-210ENST00000509876 C3orf70A6NLC5 250 aaPredicted RBP5.36□□□□□ -1.55
PHF3-210ENST00000509876 PITPNM1O00562 1244 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 PTPN2P17706 415 aa5.36□□□□□ -1.55
PHF3-210ENST00000509876 POLR2EP19388 210 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms