RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 LRRC8CQ8TDW0 803 aa18.81■□□□□ 0.6
CCHCR1-228ENST00000509552 PRMT7Q9NVM4 692 aaPredicted RBP18.81■□□□□ 0.6
CCHCR1-228ENST00000509552 PHTF1Q9UMS5 762 aa18.81■□□□□ 0.6
CCHCR1-228ENST00000509552 APOC4-APOC2K7ER74 178 aa18.8■□□□□ 0.6
CCHCR1-228ENST00000509552 APOC2P02655 101 aa18.8■□□□□ 0.6
CCHCR1-228ENST00000509552 NFICP08651 508 aa18.8■□□□□ 0.6
CCHCR1-228ENST00000509552 P4HA1P13674 534 aa18.8■□□□□ 0.6
CCHCR1-228ENST00000509552 RPA3P35244 121 aaPredicted RBP18.8■□□□□ 0.6
CCHCR1-228ENST00000509552 RPL22P35268 128 aaKnown RBP18.8■□□□□ 0.6
CCHCR1-228ENST00000509552 PSMC4P43686 418 aa18.8■□□□□ 0.6
CCHCR1-228ENST00000509552 CLCN3P51790 818 aa18.8■□□□□ 0.6
CCHCR1-228ENST00000509552 GPX6P59796 221 aa18.8■□□□□ 0.6
CCHCR1-228ENST00000509552 TNFAIP2Q03169 654 aa18.8■□□□□ 0.6
CCHCR1-228ENST00000509552 DNAJC3Q13217 504 aa18.8■□□□□ 0.6
CCHCR1-228ENST00000509552 ORC1Q13415 861 aa18.8■□□□□ 0.6
CCHCR1-228ENST00000509552 PDK4Q16654 411 aa18.8■□□□□ 0.6
CCHCR1-228ENST00000509552 KLHL38Q2WGJ6 581 aa18.8■□□□□ 0.6
CCHCR1-228ENST00000509552 HHATQ5VTY9 493 aa18.8■□□□□ 0.6
CCHCR1-228ENST00000509552 TMEM192Q8IY95 271 aa18.8■□□□□ 0.6
CCHCR1-228ENST00000509552 GPC2Q8N158 579 aa18.8■□□□□ 0.6
CCHCR1-228ENST00000509552 FBF1Q8TES7 1133 aa18.8■□□□□ 0.6
CCHCR1-228ENST00000509552 TMEM176AQ96HP8 235 aa18.8■□□□□ 0.6
CCHCR1-228ENST00000509552 C10orf88Q9H8K7 445 aa18.8■□□□□ 0.6
CCHCR1-228ENST00000509552 ASNSD1Q9NWL6 643 aa18.8■□□□□ 0.6
CCHCR1-228ENST00000509552 A0A1B0GUA9 196 aa18.8■□□□□ 0.6
CCHCR1-228ENST00000509552 IGF2BP3O00425 579 aaKnown RBP eCLIP18.8■□□□□ 0.6
CCHCR1-228ENST00000509552 SOCS7O14512 581 aa18.8■□□□□ 0.6
CCHCR1-228ENST00000509552 MCF2LO15068 1137 aa18.8■□□□□ 0.6
CCHCR1-228ENST00000509552 BANF1O75531 89 aa18.8■□□□□ 0.6
CCHCR1-228ENST00000509552 ITGB3P05106 788 aa18.8■□□□□ 0.6
CCHCR1-228ENST00000509552 ATICP31939 592 aa18.8■□□□□ 0.6
CCHCR1-228ENST00000509552 KCNJ2P63252 427 aa18.8■□□□□ 0.6
CCHCR1-228ENST00000509552 SETDB1Q15047 1291 aa18.8■□□□□ 0.6
CCHCR1-228ENST00000509552 WLSQ5T9L3 541 aa18.8■□□□□ 0.6
CCHCR1-228ENST00000509552 ANKRD22Q5VYY1 191 aa18.8■□□□□ 0.6
CCHCR1-228ENST00000509552 HSPH1Q92598 858 aa18.8■□□□□ 0.6
CCHCR1-228ENST00000509552 SDCBP2Q9H190 292 aa18.8■□□□□ 0.6
CCHCR1-228ENST00000509552 ASCC2Q9H1I8 757 aaPredicted RBP18.8■□□□□ 0.6
CCHCR1-228ENST00000509552 SMYD3Q9H7B4 428 aa18.8■□□□□ 0.6
CCHCR1-228ENST00000509552 RABGEF1Q9UJ41 708 aa18.8■□□□□ 0.6
CCHCR1-228ENST00000509552 PNMA3Q9UL41 463 aa18.8■□□□□ 0.6
CCHCR1-228ENST00000509552 PTPRFP10586 1907 aa18.8■□□□□ 0.6
CCHCR1-228ENST00000509552 LACTBL1A8MY62 500 aa18.79■□□□□ 0.6
CCHCR1-228ENST00000509552 M0QYV0 167 aa18.79■□□□□ 0.6
CCHCR1-228ENST00000509552 MICAL2O94851 1124 aa18.79■□□□□ 0.6
CCHCR1-228ENST00000509552 CD48P09326 243 aa18.79■□□□□ 0.6
CCHCR1-228ENST00000509552 STAG3L1P0CL83 205 aa18.79■□□□□ 0.6
CCHCR1-228ENST00000509552 MIPP30301 263 aa18.79■□□□□ 0.6
CCHCR1-228ENST00000509552 SKIV2L2P42285 1042 aaKnown RBP18.79■□□□□ 0.6
CCHCR1-228ENST00000509552 EIF3EP60228 445 aaKnown RBP18.79■□□□□ 0.6
CCHCR1-228ENST00000509552 KCTD2Q14681 263 aa18.79■□□□□ 0.6
CCHCR1-228ENST00000509552 C3orf62Q6ZUJ4 267 aa18.79■□□□□ 0.6
CCHCR1-228ENST00000509552 ECHDC2Q86YB7 292 aa18.79■□□□□ 0.6
CCHCR1-228ENST00000509552 PALM2Q8IXS6 379 aa18.79■□□□□ 0.6
CCHCR1-228ENST00000509552 PDIK1LQ8N165 341 aa18.79■□□□□ 0.6
CCHCR1-228ENST00000509552 CMASQ8NFW8 434 aaPredicted RBP18.79■□□□□ 0.6
CCHCR1-228ENST00000509552 MCRS1Q96EZ8 462 aa18.79■□□□□ 0.6
CCHCR1-228ENST00000509552 ADPGKQ9BRR6 497 aa18.79■□□□□ 0.6
CCHCR1-228ENST00000509552 CALN1Q9BXU9 219 aa18.79■□□□□ 0.6
CCHCR1-228ENST00000509552 MAK16Q9BXY0 300 aaKnown RBP18.79■□□□□ 0.6
CCHCR1-228ENST00000509552 MINDY3Q9H8M7 445 aa18.79■□□□□ 0.6
CCHCR1-228ENST00000509552 RSAD1Q9HA92 442 aa18.79■□□□□ 0.6
CCHCR1-228ENST00000509552 CYP3A43Q9HB55 503 aa18.79■□□□□ 0.6
CCHCR1-228ENST00000509552 SSU72Q9NP77 194 aaKnown RBP18.79■□□□□ 0.6
CCHCR1-228ENST00000509552 USP18Q9UMW8 372 aa18.79■□□□□ 0.6
CCHCR1-228ENST00000509552 CLUHO75153 1309 aa18.79■□□□□ 0.6
CCHCR1-228ENST00000509552 TYROBPO43914 113 aa18.79■□□□□ 0.6
CCHCR1-228ENST00000509552 CILPO75339 1184 aa18.79■□□□□ 0.6
CCHCR1-228ENST00000509552 CNMDO75829 334 aa18.79■□□□□ 0.6
CCHCR1-228ENST00000509552 TRUB2O95900 331 aaKnown RBP18.79■□□□□ 0.6
CCHCR1-228ENST00000509552 ATP2A2P16615 1042 aaKnown RBP18.79■□□□□ 0.6
CCHCR1-228ENST00000509552 PHKA2P46019 1235 aa18.79■□□□□ 0.6
CCHCR1-228ENST00000509552 GABRB2P47870 512 aa18.79■□□□□ 0.6
CCHCR1-228ENST00000509552 MGAT5Q09328 741 aa18.79■□□□□ 0.6
CCHCR1-228ENST00000509552 FNBP1LQ5T0N5 605 aa18.79■□□□□ 0.6
CCHCR1-228ENST00000509552 JADE1Q6IE81 842 aa18.79■□□□□ 0.6
CCHCR1-228ENST00000509552 FBXO16Q8IX29 292 aaPredicted RBP18.79■□□□□ 0.6
CCHCR1-228ENST00000509552 FBXO36Q8NEA4 188 aa18.79■□□□□ 0.6
CCHCR1-228ENST00000509552 NFKBIZQ9BYH8 718 aa18.79■□□□□ 0.6
CCHCR1-228ENST00000509552 ELOVL4Q9GZR5 314 aa18.79■□□□□ 0.6
CCHCR1-228ENST00000509552 XPO7Q9UIA9 1087 aaKnown RBP18.79■□□□□ 0.6
CCHCR1-228ENST00000509552 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.79■□□□□ 0.6
CCHCR1-228ENST00000509552 LRRC37A2A6NM11 1700 aa18.79■□□□□ 0.6
CCHCR1-228ENST00000509552 A0A0G2JLL6 359 aaPredicted RBP18.78■□□□□ 0.6
CCHCR1-228ENST00000509552 A0A1W2PPM1 405 aa18.78■□□□□ 0.6
CCHCR1-228ENST00000509552 GPR25O00155 361 aa18.78■□□□□ 0.6
CCHCR1-228ENST00000509552 IRF6O14896 467 aa18.78■□□□□ 0.6
CCHCR1-228ENST00000509552 ZWINTO95229 277 aa18.78■□□□□ 0.6
CCHCR1-228ENST00000509552 HMGCRP04035 888 aa18.78■□□□□ 0.6
CCHCR1-228ENST00000509552 TXNP10599 105 aaKnown RBP18.78■□□□□ 0.6
CCHCR1-228ENST00000509552 MCF2P10911 925 aa18.78■□□□□ 0.6
CCHCR1-228ENST00000509552 KRT4P19013 534 aa18.78■□□□□ 0.6
CCHCR1-228ENST00000509552 SSTR1P30872 391 aa18.78■□□□□ 0.6
CCHCR1-228ENST00000509552 SEPT7Q16181 437 aaKnown RBP18.78■□□□□ 0.6
CCHCR1-228ENST00000509552 FAM102AQ5T9C2 384 aaPredicted RBP18.78■□□□□ 0.6
CCHCR1-228ENST00000509552 PRRT2Q7Z6L0 340 aaPredicted RBP18.78■□□□□ 0.6
CCHCR1-228ENST00000509552 UNC45BQ8IWX7 931 aa18.78■□□□□ 0.6
CCHCR1-228ENST00000509552 TWNKQ96RR1 684 aa18.78■□□□□ 0.6
CCHCR1-228ENST00000509552 MMP19Q99542 508 aa18.78■□□□□ 0.6
CCHCR1-228ENST00000509552 TACO1Q9BSH4 297 aaKnown RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms