RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 ITGB3P05106 788 aa15.64■□□□□ 0.09
HMGCL-208ENST00000509389 ATP1A3P13637 1013 aa15.64■□□□□ 0.09
HMGCL-208ENST00000509389 GARTP22102 1010 aa15.64■□□□□ 0.09
HMGCL-208ENST00000509389 CDC25BP30305 580 aa15.64■□□□□ 0.09
HMGCL-208ENST00000509389 POLR2BP30876 1174 aaKnown RBP15.64■□□□□ 0.09
HMGCL-208ENST00000509389 CTHP32929 405 aa15.64■□□□□ 0.09
HMGCL-208ENST00000509389 CXCL12P48061 93 aa15.64■□□□□ 0.09
HMGCL-208ENST00000509389 TPM4P67936 248 aa15.64■□□□□ 0.09
HMGCL-208ENST00000509389 CCDC173Q0VFZ6 552 aa15.64■□□□□ 0.09
HMGCL-208ENST00000509389 ALCAMQ13740 583 aa15.64■□□□□ 0.09
HMGCL-208ENST00000509389 LRRC32Q14392 662 aa15.64■□□□□ 0.09
HMGCL-208ENST00000509389 PUM1Q14671 1186 aaKnown RBP eCLIP15.64■□□□□ 0.09
HMGCL-208ENST00000509389 NFIL3Q16649 462 aa15.64■□□□□ 0.09
HMGCL-208ENST00000509389 SCARA3Q6AZY7 606 aa15.64■□□□□ 0.09
HMGCL-208ENST00000509389 DGLUCYQ7Z3D6 616 aa15.64■□□□□ 0.09
HMGCL-208ENST00000509389 RALGPS2Q86X27 583 aaPredicted RBP15.64■□□□□ 0.09
HMGCL-208ENST00000509389 IRF2BP1Q8IU81 584 aa15.64■□□□□ 0.09
HMGCL-208ENST00000509389 SYCP3Q8IZU3 236 aa15.64■□□□□ 0.09
HMGCL-208ENST00000509389 C1orf127Q8N9H9 656 aa15.64■□□□□ 0.09
HMGCL-208ENST00000509389 BPIFB1Q8TDL5 484 aa15.64■□□□□ 0.09
HMGCL-208ENST00000509389 NOC3LQ8WTT2 800 aaKnown RBP15.64■□□□□ 0.09
HMGCL-208ENST00000509389 MRFAP1L1Q96HT8 127 aa15.64■□□□□ 0.09
HMGCL-208ENST00000509389 GCNAQ96QF7 691 aa15.64■□□□□ 0.09
HMGCL-208ENST00000509389 SMG9Q9H0W8 520 aaKnown RBP15.64■□□□□ 0.09
HMGCL-208ENST00000509389 THAP9Q9H5L6 903 aa15.64■□□□□ 0.09
HMGCL-208ENST00000509389 AGAP1Q9UPQ3 857 aa15.64■□□□□ 0.09
HMGCL-208ENST00000509389 MAPK8IP1Q9UQF2 711 aa15.64■□□□□ 0.09
HMGCL-208ENST00000509389 TRAF3IP3Q9Y228 551 aa15.64■□□□□ 0.09
HMGCL-208ENST00000509389 PCDHB5Q9Y5E4 795 aa15.64■□□□□ 0.09
HMGCL-208ENST00000509389 GOLGA8IPA6NC78 632 aa15.63■□□□□ 0.09
HMGCL-208ENST00000509389 GOLGA8JA6NMD2 632 aa15.63■□□□□ 0.09
HMGCL-208ENST00000509389 HMGA1P17096 107 aaKnown RBP15.63■□□□□ 0.09
HMGCL-208ENST00000509389 STX17P56962 302 aa15.63■□□□□ 0.09
HMGCL-208ENST00000509389 TNK2Q07912 1038 aa15.63■□□□□ 0.09
HMGCL-208ENST00000509389 EDRF1Q3B7T1 1238 aa15.63■□□□□ 0.09
HMGCL-208ENST00000509389 TMEM150AQ86TG1 271 aa15.63■□□□□ 0.09
HMGCL-208ENST00000509389 PDCL2Q8N4E4 241 aa15.63■□□□□ 0.09
HMGCL-208ENST00000509389 SPEM1Q8N4L4 309 aa15.63■□□□□ 0.09
HMGCL-208ENST00000509389 GPR161Q8N6U8 529 aaKnown RBP15.63■□□□□ 0.09
HMGCL-208ENST00000509389 CXorf38Q8TB03 319 aa15.63■□□□□ 0.09
HMGCL-208ENST00000509389 CACTINQ8WUQ7 758 aaKnown RBP15.63■□□□□ 0.09
HMGCL-208ENST00000509389 SECISBP2LQ93073 1101 aaKnown RBP15.63■□□□□ 0.09
HMGCL-208ENST00000509389 FAM84AQ96KN4 292 aa15.63■□□□□ 0.09
HMGCL-208ENST00000509389 CBWD1Q9BRT8 395 aa15.63■□□□□ 0.09
HMGCL-208ENST00000509389 PI4K2AQ9BTU6 479 aa15.63■□□□□ 0.09
HMGCL-208ENST00000509389 SAMSN1Q9NSI8 373 aaKnown RBP15.63■□□□□ 0.09
HMGCL-208ENST00000509389 DLL3Q9NYJ7 618 aa15.63■□□□□ 0.09
HMGCL-208ENST00000509389 RBAKQ9NYW8 714 aaPredicted RBP15.63■□□□□ 0.09
HMGCL-208ENST00000509389 L1RE1Q9UN81 338 aa15.63■□□□□ 0.09
HMGCL-208ENST00000509389 LRRC10BA6NIK2 292 aa15.62■□□□□ 0.09
HMGCL-208ENST00000509389 EXTL3O43909 919 aa15.62■□□□□ 0.09
HMGCL-208ENST00000509389 PRPF6O94906 941 aaKnown RBP15.62■□□□□ 0.09
HMGCL-208ENST00000509389 F11P03951 625 aa15.62■□□□□ 0.09
HMGCL-208ENST00000509389 GPR15P49685 360 aa15.62■□□□□ 0.09
HMGCL-208ENST00000509389 ZNF75DP51815 510 aa15.62■□□□□ 0.09
HMGCL-208ENST00000509389 PLCB2Q00722 1185 aa15.62■□□□□ 0.09
HMGCL-208ENST00000509389 TSPY1Q01534 308 aa15.62■□□□□ 0.09
HMGCL-208ENST00000509389 BFSP1Q12934 665 aa15.62■□□□□ 0.09
HMGCL-208ENST00000509389 PON2Q15165 354 aa15.62■□□□□ 0.09
HMGCL-208ENST00000509389 RSPO4Q2I0M5 234 aaPredicted RBP15.62■□□□□ 0.09
HMGCL-208ENST00000509389 DGKKQ5KSL6 1271 aa15.62■□□□□ 0.09
HMGCL-208ENST00000509389 ANKRD40Q6AI12 368 aa15.62■□□□□ 0.09
HMGCL-208ENST00000509389 Q6ZS52 159 aa15.62■□□□□ 0.09
HMGCL-208ENST00000509389 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.62■□□□□ 0.09
HMGCL-208ENST00000509389 CMTM8Q8IZV2 173 aa15.62■□□□□ 0.09
HMGCL-208ENST00000509389 CELF5Q8N6W0 485 aaKnown RBP15.62■□□□□ 0.09
HMGCL-208ENST00000509389 STKLD1Q8NE28 680 aa15.62■□□□□ 0.09
HMGCL-208ENST00000509389 PCIF1Q9H4Z3 704 aa15.62■□□□□ 0.09
HMGCL-208ENST00000509389 LIMA1Q9UHB6 759 aaKnown RBP15.62■□□□□ 0.09
HMGCL-208ENST00000509389 DNAH14Q0VDD8 3507 aa15.62■□□□□ 0.09
HMGCL-208ENST00000509389 MED19A0JLT2 244 aaPredicted RBP15.62■□□□□ 0.09
HMGCL-208ENST00000509389 PDXKO00764 312 aa15.62■□□□□ 0.09
HMGCL-208ENST00000509389 HUS1O60921 280 aa15.62■□□□□ 0.09
HMGCL-208ENST00000509389 ADCY5O95622 1261 aa15.62■□□□□ 0.09
HMGCL-208ENST00000509389 TGM1P22735 817 aa15.62■□□□□ 0.09
HMGCL-208ENST00000509389 ACAT1P24752 427 aaKnown RBP15.62■□□□□ 0.09
HMGCL-208ENST00000509389 FANCCQ00597 558 aa15.62■□□□□ 0.09
HMGCL-208ENST00000509389 DMWDQ09019 674 aa15.62■□□□□ 0.09
HMGCL-208ENST00000509389 NFE2Q16621 373 aaPredicted RBP15.62■□□□□ 0.09
HMGCL-208ENST00000509389 KNOP1Q1ED39 458 aaKnown RBP15.62■□□□□ 0.09
HMGCL-208ENST00000509389 ITPRIPL2Q3MIP1 535 aa15.62■□□□□ 0.09
HMGCL-208ENST00000509389 CSGALNACT2Q8N6G5 542 aa15.62■□□□□ 0.09
HMGCL-208ENST00000509389 LRRC52Q8N7C0 313 aa15.62■□□□□ 0.09
HMGCL-208ENST00000509389 MAB21L3Q8N8X9 362 aa15.62■□□□□ 0.09
HMGCL-208ENST00000509389 ACBD6Q9BR61 282 aa15.62■□□□□ 0.09
HMGCL-208ENST00000509389 TMEM206Q9H813 350 aa15.62■□□□□ 0.09
HMGCL-208ENST00000509389 PDE11AQ9HCR9 933 aa15.62■□□□□ 0.09
HMGCL-208ENST00000509389 GKN1Q9NS71 199 aa15.62■□□□□ 0.09
HMGCL-208ENST00000509389 THG1LQ9NWX6 298 aaKnown RBP15.62■□□□□ 0.09
HMGCL-208ENST00000509389 DDX43Q9NXZ2 648 aaKnown RBP15.62■□□□□ 0.09
HMGCL-208ENST00000509389 ZMYM5Q9UJ78 669 aa15.62■□□□□ 0.09
HMGCL-208ENST00000509389 ITGA11Q9UKX5 1188 aa15.62■□□□□ 0.09
HMGCL-208ENST00000509389 CHURC1-FNTBB4DL54 471 aa15.61■□□□□ 0.09
HMGCL-208ENST00000509389 K7ESF4 209 aa15.61■□□□□ 0.09
HMGCL-208ENST00000509389 TGFB1I1O43294 461 aa15.61■□□□□ 0.09
HMGCL-208ENST00000509389 PAPSS2O95340 614 aaPredicted RBP15.61■□□□□ 0.09
HMGCL-208ENST00000509389 KRT19P08727 400 aa15.61■□□□□ 0.09
HMGCL-208ENST00000509389 CSH1P0DML2 217 aa15.61■□□□□ 0.09
HMGCL-208ENST00000509389 CSH2P0DML3 217 aa15.61■□□□□ 0.09
HMGCL-208ENST00000509389 EEF1GP26641 437 aaKnown RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms