RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 AMPD2Q01433 879 aa11.69□□□□□ -0.54
RNF4-212ENST00000509258 TSPY1Q01534 308 aa11.69□□□□□ -0.54
RNF4-212ENST00000509258 TNK2Q07912 1038 aa11.69□□□□□ -0.54
RNF4-212ENST00000509258 DMWDQ09019 674 aa11.69□□□□□ -0.54
RNF4-212ENST00000509258 PSMD6Q15008 389 aa11.69□□□□□ -0.54
RNF4-212ENST00000509258 CSRP2Q16527 193 aa11.69□□□□□ -0.54
RNF4-212ENST00000509258 KMT5BQ4FZB7 885 aa11.69□□□□□ -0.54
RNF4-212ENST00000509258 PRR23CQ6ZRP0 262 aa11.69□□□□□ -0.54
RNF4-212ENST00000509258 TRAPPC11Q7Z392 1133 aa11.69□□□□□ -0.54
RNF4-212ENST00000509258 CACTINQ8WUQ7 758 aaKnown RBP11.69□□□□□ -0.54
RNF4-212ENST00000509258 CCDC127Q96BQ5 260 aa11.69□□□□□ -0.54
RNF4-212ENST00000509258 CHFRQ96EP1 664 aa11.69□□□□□ -0.54
RNF4-212ENST00000509258 HPDLQ96IR7 371 aa11.69□□□□□ -0.54
RNF4-212ENST00000509258 CNTNAP3BQ96NU0 1288 aa11.69□□□□□ -0.54
RNF4-212ENST00000509258 SLC22A12Q96S37 553 aa11.69□□□□□ -0.54
RNF4-212ENST00000509258 CNTNAP3Q9BZ76 1288 aa11.69□□□□□ -0.54
RNF4-212ENST00000509258 GDPD2Q9HCC8 539 aa11.69□□□□□ -0.54
RNF4-212ENST00000509258 C2orf42Q9NWW7 574 aa11.69□□□□□ -0.54
RNF4-212ENST00000509258 PCDHB5Q9Y5E4 795 aa11.69□□□□□ -0.54
RNF4-212ENST00000509258 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.69□□□□□ -0.54
RNF4-212ENST00000509258 MYO18AQ92614 2054 aaKnown RBP11.69□□□□□ -0.54
RNF4-212ENST00000509258 CHD8Q9HCK8 2581 aa11.68□□□□□ -0.54
RNF4-212ENST00000509258 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.68□□□□□ -0.54
RNF4-212ENST00000509258 PVALEFA0A1B0GWK0 134 aa11.68□□□□□ -0.54
RNF4-212ENST00000509258 OTOL1A6NHN0 477 aaPredicted RBP11.68□□□□□ -0.54
RNF4-212ENST00000509258 HRO43593 1189 aa11.68□□□□□ -0.54
RNF4-212ENST00000509258 HUS1O60921 280 aa11.68□□□□□ -0.54
RNF4-212ENST00000509258 NDUFA8P51970 172 aa11.68□□□□□ -0.54
RNF4-212ENST00000509258 CACNA2D1P54289 1103 aa11.68□□□□□ -0.54
RNF4-212ENST00000509258 AMPD3Q01432 767 aa11.68□□□□□ -0.54
RNF4-212ENST00000509258 PON2Q15165 354 aa11.68□□□□□ -0.54
RNF4-212ENST00000509258 NFE2Q16621 373 aaPredicted RBP11.68□□□□□ -0.54
RNF4-212ENST00000509258 ITPRIPL2Q3MIP1 535 aa11.68□□□□□ -0.54
RNF4-212ENST00000509258 NAIF1Q69YI7 327 aaPredicted RBP11.68□□□□□ -0.54
RNF4-212ENST00000509258 TXNDC8Q6A555 127 aa11.68□□□□□ -0.54
RNF4-212ENST00000509258 HEATR6Q6AI08 1181 aaKnown RBP11.68□□□□□ -0.54
RNF4-212ENST00000509258 FAM171BQ6P995 826 aa11.68□□□□□ -0.54
RNF4-212ENST00000509258 CEP68Q76N32 757 aa11.68□□□□□ -0.54
RNF4-212ENST00000509258 WDR49Q8IV35 697 aa11.68□□□□□ -0.54
RNF4-212ENST00000509258 TOP6BLQ8N6T0 577 aa11.68□□□□□ -0.54
RNF4-212ENST00000509258 MYLPFQ96A32 169 aa11.68□□□□□ -0.54
RNF4-212ENST00000509258 ANKRD36BP1Q96IX9 119 aa11.68□□□□□ -0.54
RNF4-212ENST00000509258 CGRRF1Q99675 332 aa11.68□□□□□ -0.54
RNF4-212ENST00000509258 ACBD6Q9BR61 282 aa11.68□□□□□ -0.54
RNF4-212ENST00000509258 LRRC27Q9C0I9 530 aa11.68□□□□□ -0.54
RNF4-212ENST00000509258 XYLT2Q9H1B5 865 aa11.68□□□□□ -0.54
RNF4-212ENST00000509258 KCTD10Q9H3F6 313 aa11.68□□□□□ -0.54
RNF4-212ENST00000509258 DPEP3Q9H4B8 488 aa11.68□□□□□ -0.54
RNF4-212ENST00000509258 MAGEF1Q9HAY2 307 aa11.68□□□□□ -0.54
RNF4-212ENST00000509258 FAM13BQ9NYF5 915 aa11.68□□□□□ -0.54
RNF4-212ENST00000509258 FAM237AA0A1B0GTK4 181 aa11.67□□□□□ -0.54
RNF4-212ENST00000509258 LRRIQ3A6PVS8 624 aaPredicted RBP11.67□□□□□ -0.54
RNF4-212ENST00000509258 SOBPA7XYQ1 873 aa11.67□□□□□ -0.54
RNF4-212ENST00000509258 KIAA0391O15091 583 aaKnown RBP11.67□□□□□ -0.54
RNF4-212ENST00000509258 TNNC2P02585 160 aa11.67□□□□□ -0.54
RNF4-212ENST00000509258 ADRB1P08588 477 aa11.67□□□□□ -0.54
RNF4-212ENST00000509258 PDGFRBP09619 1106 aa11.67□□□□□ -0.54
RNF4-212ENST00000509258 CMA1P23946 247 aa11.67□□□□□ -0.54
RNF4-212ENST00000509258 AVPR1AP37288 418 aa11.67□□□□□ -0.54
RNF4-212ENST00000509258 MYL6P60660 151 aa11.67□□□□□ -0.54
RNF4-212ENST00000509258 USP46P62068 366 aa11.67□□□□□ -0.54
RNF4-212ENST00000509258 DLG4P78352 724 aa11.67□□□□□ -0.54
RNF4-212ENST00000509258 MYL7Q01449 175 aa11.67□□□□□ -0.54
RNF4-212ENST00000509258 SRSF5Q13243 272 aaKnown RBP11.67□□□□□ -0.54
RNF4-212ENST00000509258 KNOP1Q1ED39 458 aaKnown RBP11.67□□□□□ -0.54
RNF4-212ENST00000509258 DUOXA2Q1HG44 320 aa11.67□□□□□ -0.54
RNF4-212ENST00000509258 C1orf220Q5T0J3 134 aa11.67□□□□□ -0.54
RNF4-212ENST00000509258 TDRD10Q5VZ19 366 aaKnown RBP11.67□□□□□ -0.54
RNF4-212ENST00000509258 ATL3Q6DD88 541 aa11.67□□□□□ -0.54
RNF4-212ENST00000509258 STXBP4Q6ZWJ1 553 aa11.67□□□□□ -0.54
RNF4-212ENST00000509258 WDR5BQ86VZ2 330 aa11.67□□□□□ -0.54
RNF4-212ENST00000509258 C12orf56Q8IXR9 622 aa11.67□□□□□ -0.54
RNF4-212ENST00000509258 TMEM86AQ8N2M4 240 aa11.67□□□□□ -0.54
RNF4-212ENST00000509258 MAB21L3Q8N8X9 362 aa11.67□□□□□ -0.54
RNF4-212ENST00000509258 XXYLT1Q8NBI6 393 aa11.67□□□□□ -0.54
RNF4-212ENST00000509258 USP13Q92995 863 aaPredicted RBP11.67□□□□□ -0.54
RNF4-212ENST00000509258 SYT15Q9BQS2 421 aa11.67□□□□□ -0.54
RNF4-212ENST00000509258 SDCBP2Q9H190 292 aa11.67□□□□□ -0.54
RNF4-212ENST00000509258 SMYD3Q9H7B4 428 aa11.67□□□□□ -0.54
RNF4-212ENST00000509258 KIF9Q9HAQ2 790 aa11.67□□□□□ -0.54
RNF4-212ENST00000509258 HPS4Q9NQG7 708 aa11.67□□□□□ -0.54
RNF4-212ENST00000509258 DMAC2Q9NW81 257 aa11.67□□□□□ -0.54
RNF4-212ENST00000509258 UXTQ9UBK9 157 aaPredicted RBP11.67□□□□□ -0.54
RNF4-212ENST00000509258 CFAP45Q9UL16 551 aa11.67□□□□□ -0.54
RNF4-212ENST00000509258 MAGED2Q9UNF1 606 aaPredicted RBP11.67□□□□□ -0.54
RNF4-212ENST00000509258 CCDC163A0A0D9SF12 145 aa11.66□□□□□ -0.54
RNF4-212ENST00000509258 NOL4O94818 638 aa11.66□□□□□ -0.54
RNF4-212ENST00000509258 VNN1O95497 513 aa11.66□□□□□ -0.54
RNF4-212ENST00000509258 CSH1P0DML2 217 aa11.66□□□□□ -0.54
RNF4-212ENST00000509258 CSH2P0DML3 217 aa11.66□□□□□ -0.54
RNF4-212ENST00000509258 TNNI1P19237 187 aa11.66□□□□□ -0.54
RNF4-212ENST00000509258 WARSP23381 471 aaKnown RBP11.66□□□□□ -0.54
RNF4-212ENST00000509258 RAP1GAPP47736 663 aa11.66□□□□□ -0.54
RNF4-212ENST00000509258 RPL10AP62906 217 aaKnown RBP11.66□□□□□ -0.54
RNF4-212ENST00000509258 GRSF1Q12849 480 aaKnown RBP eCLIP11.66□□□□□ -0.54
RNF4-212ENST00000509258 PPM1JQ5JR12 505 aa11.66□□□□□ -0.54
RNF4-212ENST00000509258 TRIM68Q6AZZ1 485 aa11.66□□□□□ -0.54
RNF4-212ENST00000509258 CC2D1AQ6P1N0 951 aaPredicted RBP11.66□□□□□ -0.54
RNF4-212ENST00000509258 CMTM8Q8IZV2 173 aa11.66□□□□□ -0.54
RNF4-212ENST00000509258 FAM160A2Q8N612 972 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms