RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 ADAM22Q9P0K1 906 aa11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 TPX2Q9ULW0 747 aaKnown RBP11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 ARL2BPQ9Y2Y0 163 aa11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 TMEM120BA0PK00 339 aa11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 TREHO43280 583 aa11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 GJB6O95452 261 aa11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 MYL3P08590 195 aa11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 CPT1AP50416 773 aa11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 ITGA8P53708 1063 aa11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 SLC18A1P54219 525 aa11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 ZNF365Q70YC5 407 aa11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 KATNAL2Q8IYT4 538 aa11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 C1orf54Q8WWF1 131 aa11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 DNAJB3Q8WWF6 145 aa11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 SOCS4Q8WXH5 440 aa11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 MAGEB18Q96M61 343 aa11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 TTC25Q96NG3 672 aa11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 ADPGKQ9BRR6 497 aa11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 EIF2AQ9BY44 585 aaKnown RBP11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 SDCBP2Q9H190 292 aa11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 SMYD3Q9H7B4 428 aa11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 UBN1Q9NPG3 1134 aa11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 NKIRAS1Q9NYS0 192 aa11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 HMGXB4Q9UGU5 601 aa11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 HES2Q9Y543 173 aa11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 SCINQ9Y6U3 715 aa11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 MYADML2A6NDP7 307 aa11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 NPTXRO95502 500 aa11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 IGHA2P01877 340 aa11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 POLR2BP30876 1174 aaKnown RBP11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 SKIV2L2P42285 1042 aaKnown RBP11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 PSEN2P49810 448 aa11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 ADAM17P78536 824 aa11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 IRF5Q13568 498 aa11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 ZNF268Q14587 947 aaPredicted RBP11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 TMEM132DQ14C87 1099 aa11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 LONRF1Q17RB8 773 aa11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 SPRED3Q2MJR0 410 aa11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 GALNTL6Q49A17 601 aa11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 ZNF667Q5HYK9 610 aa11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 HIBCHQ6NVY1 386 aaPredicted RBP11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 CATSPER4Q7RTX7 472 aa11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 EXD1Q8NHP7 514 aa11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 DDX27Q96GQ7 796 aaKnown RBP11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 ACAP3Q96P50 834 aa11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 ASB7Q9H672 318 aa11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 RNF19AQ9NV58 838 aa11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 SMIM35A0A1B0GVV1 85 aa11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 TCP11X1B4DZS4 312 aa11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 HAS3O00219 553 aa11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 TP73O15350 636 aa11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 ATP2C2O75185 946 aa11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 ACSL3O95573 720 aa11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 ATP6V1G2O95670 118 aa11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 BRAFP15056 766 aa11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 STX2P32856 288 aa11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 CCDC15Q0P6D6 951 aa11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 KLF1Q13351 362 aaPredicted RBP11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 MAMLD1Q13495 774 aa11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 LLGL1Q15334 1064 aa11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 FSCN1Q16658 493 aaKnown RBP11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 VSTM1Q6UX27 236 aa11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 PHF13Q86YI8 300 aaPredicted RBP11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 TRPV1Q8NER1 839 aa11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 UHMK1Q8TAS1 419 aaKnown RBP11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 CFAP57Q96MR6 1250 aa11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 TWNKQ96RR1 684 aa11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 BCO2Q9BYV7 579 aa11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 GCOM2Q9BZD3 368 aaPredicted RBP11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 AP5M1Q9H0R1 490 aa11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 KCNK9Q9NPC2 374 aa11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 SENP1Q9P0U3 644 aa11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 MCM8Q9UJA3 840 aa11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 NEU2Q9Y3R4 380 aa11.59□□□□□ -0.55
SH3RF1-203ENST00000508685 ATP5HO75947 161 aa11.58□□□□□ -0.56
SH3RF1-203ENST00000508685 DARSP14868 501 aaKnown RBP11.58□□□□□ -0.56
SH3RF1-203ENST00000508685 MMP8P22894 467 aa11.58□□□□□ -0.56
SH3RF1-203ENST00000508685 IFNAR2P48551 515 aa11.58□□□□□ -0.56
SH3RF1-203ENST00000508685 LACTBP83111 547 aaPredicted RBP11.58□□□□□ -0.56
SH3RF1-203ENST00000508685 IL9RQ01113 521 aa11.58□□□□□ -0.56
SH3RF1-203ENST00000508685 RNF43Q68DV7 783 aa11.58□□□□□ -0.56
SH3RF1-203ENST00000508685 SLC27A1Q6PCB7 646 aa11.58□□□□□ -0.56
SH3RF1-203ENST00000508685 DRICH1Q6PGQ1 229 aaPredicted RBP11.58□□□□□ -0.56
SH3RF1-203ENST00000508685 SPATA21Q7Z572 469 aa11.58□□□□□ -0.56
SH3RF1-203ENST00000508685 RCOR2Q8IZ40 523 aa11.58□□□□□ -0.56
SH3RF1-203ENST00000508685 KIF12Q96FN5 646 aa11.58□□□□□ -0.56
SH3RF1-203ENST00000508685 DDX23Q9BUQ8 820 aaKnown RBP11.58□□□□□ -0.56
SH3RF1-203ENST00000508685 CFHR5Q9BXR6 569 aa11.58□□□□□ -0.56
SH3RF1-203ENST00000508685 NXF3Q9H4D5 531 aaKnown RBP11.58□□□□□ -0.56
SH3RF1-203ENST00000508685 RXFP1Q9HBX9 757 aa11.58□□□□□ -0.56
SH3RF1-203ENST00000508685 NOD2Q9HC29 1040 aa11.58□□□□□ -0.56
SH3RF1-203ENST00000508685 CHST7Q9NS84 486 aa11.58□□□□□ -0.56
SH3RF1-203ENST00000508685 SNTG2Q9NY99 539 aa11.58□□□□□ -0.56
SH3RF1-203ENST00000508685 NINJ2Q9NZG7 142 aa11.58□□□□□ -0.56
SH3RF1-203ENST00000508685 KLHL14Q9P2G3 628 aa11.58□□□□□ -0.56
SH3RF1-203ENST00000508685 AGAP1Q9UPQ3 857 aa11.58□□□□□ -0.56
SH3RF1-203ENST00000508685 TRIP12Q14669 1992 aaPredicted RBP11.58□□□□□ -0.56
SH3RF1-203ENST00000508685 CITO14578 2027 aa11.58□□□□□ -0.56
SH3RF1-203ENST00000508685 C6orf222P0C671 652 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms