RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 CWF19L1Q69YN2 538 aaKnown RBP21.16■□□□□ 0.98
SFXN1-209ENST00000508290 POTEHQ6S545 545 aa21.16■□□□□ 0.98
SFXN1-209ENST00000508290 VITQ6UXI7 678 aa21.16■□□□□ 0.98
SFXN1-209ENST00000508290 MON1AQ86VX9 555 aa21.16■□□□□ 0.98
SFXN1-209ENST00000508290 CRYBG2Q8N1P7 616 aa21.16■□□□□ 0.98
SFXN1-209ENST00000508290 OSBPL6Q9BZF3 934 aa21.16■□□□□ 0.98
SFXN1-209ENST00000508290 TBC1D17Q9HA65 648 aa21.16■□□□□ 0.98
SFXN1-209ENST00000508290 RAB20Q9NX57 234 aa21.16■□□□□ 0.98
SFXN1-209ENST00000508290 DOCK6Q96HP0 2047 aa21.16■□□□□ 0.98
SFXN1-209ENST00000508290 HEPACAM2A8MVW5 462 aa21.15■□□□□ 0.98
SFXN1-209ENST00000508290 STK25O00506 426 aa21.15■□□□□ 0.98
SFXN1-209ENST00000508290 ZNF263O14978 683 aa21.15■□□□□ 0.98
SFXN1-209ENST00000508290 FGFR1OPO95684 399 aaKnown RBP21.15■□□□□ 0.98
SFXN1-209ENST00000508290 GPR15P49685 360 aa21.15■□□□□ 0.98
SFXN1-209ENST00000508290 PMS1P54277 932 aaKnown RBP21.15■□□□□ 0.98
SFXN1-209ENST00000508290 VCPP55072 806 aaKnown RBP21.15■□□□□ 0.98
SFXN1-209ENST00000508290 CDH8P55286 799 aa21.15■□□□□ 0.98
SFXN1-209ENST00000508290 PLCB2Q00722 1185 aa21.15■□□□□ 0.98
SFXN1-209ENST00000508290 PAK1Q13153 545 aa21.15■□□□□ 0.98
SFXN1-209ENST00000508290 ARHGAP29Q52LW3 1261 aa21.15■□□□□ 0.98
SFXN1-209ENST00000508290 SLC44A4Q53GD3 710 aa21.15■□□□□ 0.98
SFXN1-209ENST00000508290 DCAF17Q5H9S7 520 aaPredicted RBP21.15■□□□□ 0.98
SFXN1-209ENST00000508290 WDR44Q5JSH3 913 aa21.15■□□□□ 0.98
SFXN1-209ENST00000508290 TCERG1LQ5VWI1 586 aa21.15■□□□□ 0.98
SFXN1-209ENST00000508290 SCARA5Q6ZMJ2 495 aa21.15■□□□□ 0.98
SFXN1-209ENST00000508290 CMTM8Q8IZV2 173 aa21.15■□□□□ 0.98
SFXN1-209ENST00000508290 CELF5Q8N6W0 485 aaKnown RBP21.15■□□□□ 0.98
SFXN1-209ENST00000508290 SMARCD1Q96GM5 515 aa21.15■□□□□ 0.98
SFXN1-209ENST00000508290 DDX23Q9BUQ8 820 aaKnown RBP21.15■□□□□ 0.98
SFXN1-209ENST00000508290 TTLL2Q9BWV7 592 aa21.15■□□□□ 0.98
SFXN1-209ENST00000508290 PLA2G2FQ9BZM2 168 aa21.15■□□□□ 0.98
SFXN1-209ENST00000508290 THG1LQ9NWX6 298 aaKnown RBP21.15■□□□□ 0.98
SFXN1-209ENST00000508290 MRPS17Q9Y2R5 130 aaKnown RBP21.15■□□□□ 0.98
SFXN1-209ENST00000508290 COQ4Q9Y3A0 265 aa21.15■□□□□ 0.98
SFXN1-209ENST00000508290 NME7Q9Y5B8 376 aa21.15■□□□□ 0.98
SFXN1-209ENST00000508290 ZNF318Q5VUA4 2279 aa21.15■□□□□ 0.98
SFXN1-209ENST00000508290 ZDBF2Q9HCK1 2354 aa21.14■□□□□ 0.97
SFXN1-209ENST00000508290 TRIM49BA6NDI0 452 aa21.14■□□□□ 0.97
SFXN1-209ENST00000508290 PPP1R3GB7ZBB8 358 aa21.14■□□□□ 0.97
SFXN1-209ENST00000508290 NRG2O14511 850 aaPredicted RBP21.14■□□□□ 0.97
SFXN1-209ENST00000508290 PMM2O15305 246 aa21.14■□□□□ 0.97
SFXN1-209ENST00000508290 CHADO15335 359 aa21.14■□□□□ 0.97
SFXN1-209ENST00000508290 VIPR2P41587 438 aa21.14■□□□□ 0.97
SFXN1-209ENST00000508290 MAGEA9P43362 315 aa21.14■□□□□ 0.97
SFXN1-209ENST00000508290 CYP4F8P98187 520 aa21.14■□□□□ 0.97
SFXN1-209ENST00000508290 CETN1Q12798 172 aa21.14■□□□□ 0.97
SFXN1-209ENST00000508290 ZNF268Q14587 947 aaPredicted RBP21.14■□□□□ 0.97
SFXN1-209ENST00000508290 CCDC142Q17RM4 750 aa21.14■□□□□ 0.97
SFXN1-209ENST00000508290 TTI2Q6NXR4 508 aa21.14■□□□□ 0.97
SFXN1-209ENST00000508290 TMEM150AQ86TG1 271 aa21.14■□□□□ 0.97
SFXN1-209ENST00000508290 TMEM105Q8N8V8 129 aa21.14■□□□□ 0.97
SFXN1-209ENST00000508290 ST13P5Q8NFI4 369 aaPredicted RBP21.14■□□□□ 0.97
SFXN1-209ENST00000508290 NELFBQ8WX92 580 aa21.14■□□□□ 0.97
SFXN1-209ENST00000508290 FAM122AQ96E09 287 aa21.14■□□□□ 0.97
SFXN1-209ENST00000508290 EEF2KMTQ96G04 330 aa21.14■□□□□ 0.97
SFXN1-209ENST00000508290 GBP4Q96PP9 640 aa21.14■□□□□ 0.97
SFXN1-209ENST00000508290 NT5C1AQ9BXI3 368 aa21.14■□□□□ 0.97
SFXN1-209ENST00000508290 SDCBP2Q9H190 292 aa21.14■□□□□ 0.97
SFXN1-209ENST00000508290 DPEP3Q9H4B8 488 aa21.14■□□□□ 0.97
SFXN1-209ENST00000508290 MMRN2Q9H8L6 949 aa21.14■□□□□ 0.97
SFXN1-209ENST00000508290 KANSL1LA0AUZ9 987 aa21.13■□□□□ 0.97
SFXN1-209ENST00000508290 F8VP50 259 aa21.13■□□□□ 0.97
SFXN1-209ENST00000508290 MAN2B1O00754 1011 aa21.13■□□□□ 0.97
SFXN1-209ENST00000508290 GALR2O43603 387 aaPredicted RBP21.13■□□□□ 0.97
SFXN1-209ENST00000508290 RTN3O95197 1032 aaPredicted RBP21.13■□□□□ 0.97
SFXN1-209ENST00000508290 CD44P16070 742 aaKnown RBP21.13■□□□□ 0.97
SFXN1-209ENST00000508290 BMP6P22004 513 aa21.13■□□□□ 0.97
SFXN1-209ENST00000508290 GDI1P31150 447 aa21.13■□□□□ 0.97
SFXN1-209ENST00000508290 RAP1GAPP47736 663 aa21.13■□□□□ 0.97
SFXN1-209ENST00000508290 CDR1P51861 262 aa21.13■□□□□ 0.97
SFXN1-209ENST00000508290 NDST1P52848 882 aa21.13■□□□□ 0.97
SFXN1-209ENST00000508290 STXBP5Q5T5C0 1151 aa21.13■□□□□ 0.97
SFXN1-209ENST00000508290 ISM2Q6H9L7 571 aa21.13■□□□□ 0.97
SFXN1-209ENST00000508290 KLHL10Q6JEL2 608 aa21.13■□□□□ 0.97
SFXN1-209ENST00000508290 PDZD8Q8NEN9 1154 aa21.13■□□□□ 0.97
SFXN1-209ENST00000508290 BPIFB1Q8TDL5 484 aa21.13■□□□□ 0.97
SFXN1-209ENST00000508290 SLC35C1Q96A29 364 aa21.13■□□□□ 0.97
SFXN1-209ENST00000508290 SLC46A2Q9BY10 475 aa21.13■□□□□ 0.97
SFXN1-209ENST00000508290 B3GNT5Q9BYG0 378 aa21.13■□□□□ 0.97
SFXN1-209ENST00000508290 DMAP1Q9NPF5 467 aaPredicted RBP21.13■□□□□ 0.97
SFXN1-209ENST00000508290 COMMD8Q9NX08 183 aa21.13■□□□□ 0.97
SFXN1-209ENST00000508290 SIT1Q9Y3P8 196 aa21.13■□□□□ 0.97
SFXN1-209ENST00000508290 TRAV19A0A0A6YYK7 116 aa21.12■□□□□ 0.97
SFXN1-209ENST00000508290 NCAM2O15394 837 aa21.12■□□□□ 0.97
SFXN1-209ENST00000508290 P4HA2O15460 535 aa21.12■□□□□ 0.97
SFXN1-209ENST00000508290 PLA2G5P39877 138 aa21.12■□□□□ 0.97
SFXN1-209ENST00000508290 GRM2Q14416 872 aa21.12■□□□□ 0.97
SFXN1-209ENST00000508290 CCDC40Q4G0X9 1142 aa21.12■□□□□ 0.97
SFXN1-209ENST00000508290 SDHAF4Q5VUM1 108 aa21.12■□□□□ 0.97
SFXN1-209ENST00000508290 SPOPLQ6IQ16 392 aa21.12■□□□□ 0.97
SFXN1-209ENST00000508290 ZNF852Q6ZMS4 543 aa21.12■□□□□ 0.97
SFXN1-209ENST00000508290 FAM35AQ86V20 835 aa21.12■□□□□ 0.97
SFXN1-209ENST00000508290 OVCA2Q8WZ82 227 aa21.12■□□□□ 0.97
SFXN1-209ENST00000508290 SLITRK1Q96PX8 696 aa21.12■□□□□ 0.97
SFXN1-209ENST00000508290 MED10Q9BTT4 135 aa21.12■□□□□ 0.97
SFXN1-209ENST00000508290 ZNF518BQ9C0D4 1074 aa21.12■□□□□ 0.97
SFXN1-209ENST00000508290 TDP1Q9NUW8 608 aa21.12■□□□□ 0.97
SFXN1-209ENST00000508290 TRPM5Q9NZQ8 1165 aa21.12■□□□□ 0.97
SFXN1-209ENST00000508290 NCANO14594 1321 aa21.11■□□□□ 0.97
SFXN1-209ENST00000508290 BIN1O00499 593 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 1083.8 ms