RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 PTPN21Q16825 1174 aa11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 FUT11Q495W5 492 aa11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 AARS2Q5JTZ9 985 aaKnown RBP11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 CGB2Q6NT52 195 aa11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 LINC00299Q6ZSB3 139 aa11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 FBXO11Q86XK2 927 aa11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 ZNF34Q8IZ26 560 aa11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 RTKN2Q8IZC4 609 aa11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 FAM9CQ8IZT9 166 aa11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 PI4K2BQ8TCG2 481 aa11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 KBTBD7Q8WVZ9 684 aa11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 SEPT1Q8WYJ6 367 aa11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 ZUFSPQ96AP4 578 aa11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 HDAC11Q96DB2 347 aa11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 ARL5BQ96KC2 179 aa11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 C8orf37Q96NL8 207 aa11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 MIPEPQ99797 713 aa11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 GAL3ST1Q99999 423 aa11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 SELENOSQ9BQE4 189 aa11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 NUDT12Q9BQG2 462 aa11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 ROPN1BQ9BZX4 212 aaPredicted RBP11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 ROPN1Q9HAT0 212 aaPredicted RBP11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 ZFYVE28Q9HCC9 887 aa11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 CYP4F12Q9HCS2 524 aa11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 TSPYL4Q9UJ04 414 aa11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 MAN1B1Q9UKM7 699 aa11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 CAPN11Q9UMQ6 739 aa11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 VPS4AQ9UN37 437 aa11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 ZNF175Q9Y473 711 aa11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 SYCP2Q9BX26 1530 aa11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 TYW5A2RUC4 315 aaKnown RBP11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 POTECB2RU33 542 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 hCG_2039718K7EN88 272 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 EXOC3O60645 756 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 JAK2O60674 1132 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 PGM3O95394 542 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 PDE6AP16499 860 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 TARSP26639 723 aaKnown RBP11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 CDC27P30260 824 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 ADCY7P51828 1080 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 VBP1P61758 197 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 PPARAQ07869 468 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 MAP2K5Q13163 448 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 PPP2R5CQ13362 524 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 MOGSQ13724 837 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 SLC39A14Q15043 492 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 KRT24Q2M2I5 525 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 CFAP70Q5T0N1 1121 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 DPP9Q86TI2 863 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 RASSF3Q86WH2 238 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 ADGRG5Q8IZF4 528 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 C12orf50Q8NA57 414 aaPredicted RBP11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 SLC4A11Q8NBS3 891 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 ATAD1Q8NBU5 361 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 NEDD1Q8NHV4 660 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 UBLCP1Q8WVY7 318 aaPredicted RBP11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 CDCA5Q96FF9 252 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 KRT12Q99456 494 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 NUP88Q99567 741 aaPredicted RBP11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 USB1Q9BQ65 265 aaKnown RBP11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 ACAT2Q9BWD1 397 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 LACRTQ9GZZ8 138 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 TP63Q9H3D4 680 aaPredicted RBP11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 WDR6Q9NNW5 1121 aaKnown RBP11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 CSNK1G3Q9Y6M4 447 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 DLC1Q96QB1 1528 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 MST1RQ04912 1400 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 MINK1Q8N4C8 1332 aaPredicted RBP11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 VWDEQ8N2E2 1590 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 H3BRJ5 948 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 RGS16O15492 202 aaPredicted RBP11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 ITGB1P05556 798 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 TYK2P29597 1187 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 BMPR1AP36894 532 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 RPP38P78345 283 aaKnown RBP11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 RHAGQ02094 409 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 FKBP4Q02790 459 aaKnown RBP eCLIP11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 LRRC74AQ0VAA2 488 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 TARDBPQ13148 414 aaKnown RBP eCLIP11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 SIM2Q14190 667 aaPredicted RBP11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 NFIL3Q16649 462 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 LETM2Q2VYF4 491 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 TRIM16LQ309B1 348 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 C10orf62Q5T681 223 aaPredicted RBP11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 EEPD1Q7L9B9 569 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 TAS2R42Q7RTR8 314 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 OTOP3Q7RTS5 596 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 TRIM59Q8IWR1 403 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 PM20D2Q8IYS1 436 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 FAM109AQ8N4B1 249 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 MAP6Q96JE9 813 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 CHP1Q99653 195 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 C1QTNF7Q9BXJ2 289 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 TLR10Q9BXR5 811 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 KLHL25Q9H0H3 589 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 MMRN2Q9H8L6 949 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 ASNSD1Q9NWL6 643 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 FAM198AQ9UFP1 575 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 SEPT3Q9UH03 358 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms